RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 SECTM1Q8WVN6 248 aa13.5□□□□□ -0.25
SEC13-218ENST00000490283 RHOVQ96L33 236 aa13.5□□□□□ -0.25
SEC13-218ENST00000490283 MSGN1A6NI15 193 aa13.49□□□□□ -0.25
SEC13-218ENST00000490283 LY86O95711 162 aa13.49□□□□□ -0.25
SEC13-218ENST00000490283 SAA1P0DJI8 122 aaPredicted RBP13.49□□□□□ -0.25
SEC13-218ENST00000490283 RPS19P39019 145 aaKnown RBP13.49□□□□□ -0.25
SEC13-218ENST00000490283 KIR2DS2P43631 304 aa13.49□□□□□ -0.25
SEC13-218ENST00000490283 TMEM69Q5SWH9 247 aa13.49□□□□□ -0.25
SEC13-218ENST00000490283 MMD2Q8IY49 270 aa13.49□□□□□ -0.25
SEC13-218ENST00000490283 OR13F1Q8NGS4 319 aa13.49□□□□□ -0.25
SEC13-218ENST00000490283 SRSF12Q8WXF0 261 aaKnown RBP13.49□□□□□ -0.25
SEC13-218ENST00000490283 DLX4Q92988 240 aaPredicted RBP13.49□□□□□ -0.25
SEC13-218ENST00000490283 KCTD12Q96CX2 325 aaKnown RBP13.49□□□□□ -0.25
SEC13-218ENST00000490283 RANGRFQ9HD47 186 aaPredicted RBP13.49□□□□□ -0.25
SEC13-218ENST00000490283 TAS2R8Q9NYW2 309 aa13.49□□□□□ -0.25
SEC13-218ENST00000490283 SCOCQ9UIL1 159 aa13.49□□□□□ -0.25
SEC13-218ENST00000490283 ZNF256Q9Y2P7 627 aaPredicted RBP13.49□□□□□ -0.25
SEC13-218ENST00000490283 PPYP01298 95 aa13.48□□□□□ -0.25
SEC13-218ENST00000490283 ZP3P21754 424 aa13.48□□□□□ -0.25
SEC13-218ENST00000490283 RPL30P62888 115 aaKnown RBP13.48□□□□□ -0.25
SEC13-218ENST00000490283 SSBP2P81877 361 aaPredicted RBP13.48□□□□□ -0.25
SEC13-218ENST00000490283 MSMO1Q15800 293 aa13.48□□□□□ -0.25
SEC13-218ENST00000490283 MFSD4AQ8N468 514 aa13.48□□□□□ -0.25
SEC13-218ENST00000490283 ZBTB34Q8NCN2 500 aa13.48□□□□□ -0.25
SEC13-218ENST00000490283 OR5AP2Q8NGF4 316 aa13.48□□□□□ -0.25
SEC13-218ENST00000490283 PRR25Q96S07 402 aa13.48□□□□□ -0.25
SEC13-218ENST00000490283 SPIN2AQ99865 258 aa13.48□□□□□ -0.25
SEC13-218ENST00000490283 SPIN2BQ9BPZ2 258 aa13.48□□□□□ -0.25
SEC13-218ENST00000490283 TINAGL1Q9GZM7 467 aaPredicted RBP13.48□□□□□ -0.25
SEC13-218ENST00000490283 BRI3O95415 125 aa13.47□□□□□ -0.25
SEC13-218ENST00000490283 IGLV2-14P01704 120 aa13.47□□□□□ -0.25
SEC13-218ENST00000490283 FCER2P06734 321 aa13.47□□□□□ -0.25
SEC13-218ENST00000490283 APELAP0DMC3 54 aa13.47□□□□□ -0.25
SEC13-218ENST00000490283 FXYD4P59646 89 aa13.47□□□□□ -0.25
SEC13-218ENST00000490283 HERV-K104P61576 105 aa13.47□□□□□ -0.25
SEC13-218ENST00000490283 CATR1Q13166 79 aa13.47□□□□□ -0.25
SEC13-218ENST00000490283 BORCS5Q969J3 196 aa13.47□□□□□ -0.25
SEC13-218ENST00000490283 SLC25A46Q96AG3 418 aa13.47□□□□□ -0.25
SEC13-218ENST00000490283 USMG5Q96IX5 58 aa13.47□□□□□ -0.25
SEC13-218ENST00000490283 OR4C12Q96R67 309 aa13.47□□□□□ -0.25
SEC13-218ENST00000490283 B9D2Q9BPU9 175 aa13.47□□□□□ -0.25
SEC13-218ENST00000490283 AIFM2Q9BRQ8 373 aa13.47□□□□□ -0.25
SEC13-218ENST00000490283 ELOVL1Q9BW60 279 aa13.47□□□□□ -0.25
SEC13-218ENST00000490283 SLC5A7Q9GZV3 580 aa13.47□□□□□ -0.25
SEC13-218ENST00000490283 ZNF430Q9H8G1 570 aaPredicted RBP13.47□□□□□ -0.25
SEC13-218ENST00000490283 MEIS3P1A6NDR6 274 aa13.46□□□□□ -0.25
SEC13-218ENST00000490283 OR2A4O95047 310 aa13.46□□□□□ -0.25
SEC13-218ENST00000490283 HRASP01112 189 aa13.46□□□□□ -0.25
SEC13-218ENST00000490283 OR9G9P0C7N8 305 aa13.46□□□□□ -0.25
SEC13-218ENST00000490283 PTHLHP12272 177 aa13.46□□□□□ -0.25
SEC13-218ENST00000490283 TAS2R20P59543 309 aa13.46□□□□□ -0.25
SEC13-218ENST00000490283 SLC25A42Q86VD7 318 aa13.46□□□□□ -0.25
SEC13-218ENST00000490283 OR6Q1Q8NGQ2 317 aa13.46□□□□□ -0.25
SEC13-218ENST00000490283 OR2A7Q96R45 310 aa13.46□□□□□ -0.25
SEC13-218ENST00000490283 FUNDC2Q9BWH2 189 aa13.46□□□□□ -0.25
SEC13-218ENST00000490283 CCL28Q9NRJ3 127 aa13.46□□□□□ -0.25
SEC13-218ENST00000490283 SMIM31A0A1B0GVY4 71 aa13.45□□□□□ -0.26
SEC13-218ENST00000490283 ANKRD34BA5PLL1 514 aa13.45□□□□□ -0.26
SEC13-218ENST00000490283 TNFSF12O43508 249 aa13.45□□□□□ -0.26
SEC13-218ENST00000490283 ACSM6Q6P461 480 aa13.45□□□□□ -0.26
SEC13-218ENST00000490283 GIMAP1Q8WWP7 306 aa13.45□□□□□ -0.26
SEC13-218ENST00000490283 SNAPC3Q92966 411 aa13.45□□□□□ -0.26
SEC13-218ENST00000490283 EHFQ9NZC4 300 aa13.45□□□□□ -0.26
SEC13-218ENST00000490283 DPPA5A6NC42 116 aa13.44□□□□□ -0.26
SEC13-218ENST00000490283 TRIM64CA6NLI5 447 aa13.44□□□□□ -0.26
SEC13-218ENST00000490283 KBTBD11O94819 623 aa13.44□□□□□ -0.26
SEC13-218ENST00000490283 PRSS3P35030 304 aa13.44□□□□□ -0.26
SEC13-218ENST00000490283 MAS1LP35410 378 aa13.44□□□□□ -0.26
SEC13-218ENST00000490283 TAS2R46P59540 309 aa13.44□□□□□ -0.26
SEC13-218ENST00000490283 VBP1P61758 197 aa13.44□□□□□ -0.26
SEC13-218ENST00000490283 NCS1P62166 190 aa13.44□□□□□ -0.26
SEC13-218ENST00000490283 EIF4EBP1Q13541 118 aaPredicted RBP13.44□□□□□ -0.26
SEC13-218ENST00000490283 MRGPRG-AS1Q2M3A8 158 aa13.44□□□□□ -0.26
SEC13-218ENST00000490283 TMEM17Q86X19 198 aa13.44□□□□□ -0.26
SEC13-218ENST00000490283 VKORC1L1Q8N0U8 176 aa13.44□□□□□ -0.26
SEC13-218ENST00000490283 SPAG16Q8N0X2 631 aa13.44□□□□□ -0.26
SEC13-218ENST00000490283 ADAD2Q8NCV1 583 aaKnown RBP13.44□□□□□ -0.26
SEC13-218ENST00000490283 OR5H2Q8NGV7 314 aa13.44□□□□□ -0.26
SEC13-218ENST00000490283 COMMD3Q9UBI1 195 aa13.44□□□□□ -0.26
SEC13-218ENST00000490283 PEF1Q9UBV8 284 aaKnown RBP13.44□□□□□ -0.26
SEC13-218ENST00000490283 FAM223BA6NKX1 122 aa13.43□□□□□ -0.26
SEC13-218ENST00000490283 RPL27AP46776 148 aaKnown RBP13.43□□□□□ -0.26
SEC13-218ENST00000490283 TATDN3Q17R31 274 aa13.43□□□□□ -0.26
SEC13-218ENST00000490283 VAX1Q5SQQ9 334 aa13.43□□□□□ -0.26
SEC13-218ENST00000490283 SSX9Q7RTT3 188 aa13.43□□□□□ -0.26
SEC13-218ENST00000490283 FAM223AQ8IWN6 122 aa13.43□□□□□ -0.26
SEC13-218ENST00000490283 TMEM167AQ8TBQ9 72 aa13.43□□□□□ -0.26
SEC13-218ENST00000490283 CMTM3Q96MX0 182 aa13.43□□□□□ -0.26
SEC13-218ENST00000490283 RSRP1Q9BUV0 290 aa13.43□□□□□ -0.26
SEC13-218ENST00000490283 RBFOX2O43251 390 aaKnown RBP eCLIP13.42□□□□□ -0.26
SEC13-218ENST00000490283 APOA1P02647 267 aa13.42□□□□□ -0.26
SEC13-218ENST00000490283 RORCP51449 518 aa13.42□□□□□ -0.26
SEC13-218ENST00000490283 RHOGP84095 191 aa13.42□□□□□ -0.26
SEC13-218ENST00000490283 DEFA5Q01523 94 aa13.42□□□□□ -0.26
SEC13-218ENST00000490283 AADACL3Q5VUY0 350 aa13.42□□□□□ -0.26
SEC13-218ENST00000490283 ZNF343Q6P1L6 599 aa13.42□□□□□ -0.26
SEC13-218ENST00000490283 PUSL1Q8N0Z8 303 aaKnown RBP13.42□□□□□ -0.26
SEC13-218ENST00000490283 OR4A5Q8NH83 315 aa13.42□□□□□ -0.26
SEC13-218ENST00000490283 CD300LFQ8TDQ1 290 aa13.42□□□□□ -0.26
SEC13-218ENST00000490283 FYTTD1Q96QD9 318 aaKnown RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms