RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 PPYP01298 95 aa15.26■□□□□ 0.03
SMC4-222ENST00000490207 NCS1P62166 190 aa15.26■□□□□ 0.03
SMC4-222ENST00000490207 EIF4EBP1Q13541 118 aaPredicted RBP15.26■□□□□ 0.03
SMC4-222ENST00000490207 DCTN2Q13561 401 aaKnown RBP15.26■□□□□ 0.03
SMC4-222ENST00000490207 CDK10Q15131 360 aa15.26■□□□□ 0.03
SMC4-222ENST00000490207 SLC25A46Q96AG3 418 aa15.26■□□□□ 0.03
SMC4-222ENST00000490207 RHOVQ96L33 236 aa15.26■□□□□ 0.03
SMC4-222ENST00000490207 TAS2R8Q9NYW2 309 aa15.26■□□□□ 0.03
SMC4-222ENST00000490207 SCOCQ9UIL1 159 aa15.26■□□□□ 0.03
SMC4-222ENST00000490207 C13orf42A0A1B0GVH6 325 aa15.25■□□□□ 0.03
SMC4-222ENST00000490207 HSPB1P04792 205 aaKnown RBP15.25■□□□□ 0.03
SMC4-222ENST00000490207 APELAP0DMC3 54 aa15.25■□□□□ 0.03
SMC4-222ENST00000490207 ECI1P42126 302 aa15.25■□□□□ 0.03
SMC4-222ENST00000490207 TAS2R20P59543 309 aa15.25■□□□□ 0.03
SMC4-222ENST00000490207 MSMO1Q15800 293 aa15.25■□□□□ 0.03
SMC4-222ENST00000490207 ZNF66Q6ZN08 573 aa15.25■□□□□ 0.03
SMC4-222ENST00000490207 SRSF12Q8WXF0 261 aaKnown RBP15.25■□□□□ 0.03
SMC4-222ENST00000490207 DLX4Q92988 240 aaPredicted RBP15.25■□□□□ 0.03
SMC4-222ENST00000490207 KCTD12Q96CX2 325 aaKnown RBP15.25■□□□□ 0.03
SMC4-222ENST00000490207 CCL28Q9NRJ3 127 aa15.25■□□□□ 0.03
SMC4-222ENST00000490207 COA4Q9NYJ1 87 aa15.25■□□□□ 0.03
SMC4-222ENST00000490207 DNAH9Q9NYC9 4486 aa15.25■□□□□ 0.03
SMC4-222ENST00000490207 INSL3P51460 131 aa15.24■□□□□ 0.03
SMC4-222ENST00000490207 VBP1P61758 197 aa15.24■□□□□ 0.03
SMC4-222ENST00000490207 MMD2Q8IY49 270 aa15.24■□□□□ 0.03
SMC4-222ENST00000490207 MFSD4AQ8N468 514 aa15.24■□□□□ 0.03
SMC4-222ENST00000490207 OR5AP2Q8NGF4 316 aa15.24■□□□□ 0.03
SMC4-222ENST00000490207 PRR25Q96S07 402 aa15.24■□□□□ 0.03
SMC4-222ENST00000490207 GPHA2Q96T91 129 aa15.24■□□□□ 0.03
SMC4-222ENST00000490207 ZNF430Q9H8G1 570 aaPredicted RBP15.24■□□□□ 0.03
SMC4-222ENST00000490207 TNCP24821 2201 aa15.23■□□□□ 0.03
SMC4-222ENST00000490207 A0A0G2JLM5 398 aa15.23■□□□□ 0.03
SMC4-222ENST00000490207 MSGN1A6NI15 193 aa15.23■□□□□ 0.03
SMC4-222ENST00000490207 MPPED1O15442 326 aa15.23■□□□□ 0.03
SMC4-222ENST00000490207 TNFSF12O43508 249 aa15.23■□□□□ 0.03
SMC4-222ENST00000490207 ACTL6BO94805 426 aa15.23■□□□□ 0.03
SMC4-222ENST00000490207 SMIM18P0DKX4 95 aa15.23■□□□□ 0.03
SMC4-222ENST00000490207 KIR2DS2P43631 304 aa15.23■□□□□ 0.03
SMC4-222ENST00000490207 FXYD4P59646 89 aa15.23■□□□□ 0.03
SMC4-222ENST00000490207 DEFA5Q01523 94 aa15.23■□□□□ 0.03
SMC4-222ENST00000490207 TINAGL1Q9GZM7 467 aaPredicted RBP15.23■□□□□ 0.03
SMC4-222ENST00000490207 SLC5A7Q9GZV3 580 aa15.23■□□□□ 0.03
SMC4-222ENST00000490207 SAP30O75446 220 aa15.22■□□□□ 0.03
SMC4-222ENST00000490207 BRI3O95415 125 aa15.22■□□□□ 0.03
SMC4-222ENST00000490207 EIF4EP06730 217 aaKnown RBP15.22■□□□□ 0.03
SMC4-222ENST00000490207 ZNF429Q86V71 674 aa15.22■□□□□ 0.03
SMC4-222ENST00000490207 VKORC1L1Q8N0U8 176 aa15.22■□□□□ 0.03
SMC4-222ENST00000490207 ZBTB34Q8NCN2 500 aa15.22■□□□□ 0.03
SMC4-222ENST00000490207 VSTM2AQ8TAG5 236 aa15.22■□□□□ 0.03
SMC4-222ENST00000490207 EHFQ9NZC4 300 aa15.22■□□□□ 0.03
SMC4-222ENST00000490207 COMMD3Q9UBI1 195 aa15.22■□□□□ 0.03
SMC4-222ENST00000490207 ANAPC10Q9UM13 185 aa15.22■□□□□ 0.03
SMC4-222ENST00000490207 KBTBD11O94819 623 aa15.21■□□□□ 0.03
SMC4-222ENST00000490207 OR9G9P0C7N8 305 aa15.21■□□□□ 0.03
SMC4-222ENST00000490207 BRWD1-AS2P59051 145 aa15.21■□□□□ 0.03
SMC4-222ENST00000490207 HERV-K104P61576 105 aa15.21■□□□□ 0.03
SMC4-222ENST00000490207 CATR1Q13166 79 aa15.21■□□□□ 0.03
SMC4-222ENST00000490207 C10orf55Q5SWW7 151 aa15.21■□□□□ 0.03
SMC4-222ENST00000490207 TMEM17Q86X19 198 aa15.21■□□□□ 0.03
SMC4-222ENST00000490207 ADAD2Q8NCV1 583 aaKnown RBP15.21■□□□□ 0.03
SMC4-222ENST00000490207 GIMAP1Q8WWP7 306 aa15.21■□□□□ 0.03
SMC4-222ENST00000490207 ZNF256Q9Y2P7 627 aaPredicted RBP15.21■□□□□ 0.03
SMC4-222ENST00000490207 OR2A4O95047 310 aa15.2■□□□□ 0.02
SMC4-222ENST00000490207 HRASP01112 189 aa15.2■□□□□ 0.02
SMC4-222ENST00000490207 TAS2R46P59540 309 aa15.2■□□□□ 0.02
SMC4-222ENST00000490207 CD69Q07108 199 aa15.2■□□□□ 0.02
SMC4-222ENST00000490207 PUSL1Q8N0Z8 303 aaKnown RBP15.2■□□□□ 0.02
SMC4-222ENST00000490207 TMEM167AQ8TBQ9 72 aa15.2■□□□□ 0.02
SMC4-222ENST00000490207 OR2A7Q96R45 310 aa15.2■□□□□ 0.02
SMC4-222ENST00000490207 SPIN2AQ99865 258 aa15.2■□□□□ 0.02
SMC4-222ENST00000490207 B9D2Q9BPU9 175 aa15.2■□□□□ 0.02
SMC4-222ENST00000490207 SPIN2BQ9BPZ2 258 aa15.2■□□□□ 0.02
SMC4-222ENST00000490207 RANGRFQ9HD47 186 aaPredicted RBP15.2■□□□□ 0.02
SMC4-222ENST00000490207 ANKRD34BA5PLL1 514 aa15.19■□□□□ 0.02
SMC4-222ENST00000490207 LY86O95711 162 aa15.19■□□□□ 0.02
SMC4-222ENST00000490207 APOA1P02647 267 aa15.19■□□□□ 0.02
SMC4-222ENST00000490207 ZP3P21754 424 aa15.19■□□□□ 0.02
SMC4-222ENST00000490207 PRSS3P35030 304 aa15.19■□□□□ 0.02
SMC4-222ENST00000490207 DYRK1AQ13627 763 aa15.19■□□□□ 0.02
SMC4-222ENST00000490207 ACSM6Q6P461 480 aa15.19■□□□□ 0.02
SMC4-222ENST00000490207 ZNF818PQ6ZRF7 136 aa15.19■□□□□ 0.02
SMC4-222ENST00000490207 SSX9Q7RTT3 188 aa15.19■□□□□ 0.02
SMC4-222ENST00000490207 SPAG16Q8N0X2 631 aa15.19■□□□□ 0.02
SMC4-222ENST00000490207 OR5H2Q8NGV7 314 aa15.19■□□□□ 0.02
SMC4-222ENST00000490207 USMG5Q96IX5 58 aa15.19■□□□□ 0.02
SMC4-222ENST00000490207 CMTM3Q96MX0 182 aa15.19■□□□□ 0.02
SMC4-222ENST00000490207 SULT1C2O00338 296 aa15.18■□□□□ 0.02
SMC4-222ENST00000490207 GABARAPO95166 117 aa15.18■□□□□ 0.02
SMC4-222ENST00000490207 PMP2P02689 132 aa15.18■□□□□ 0.02
SMC4-222ENST00000490207 NAT1P18440 290 aa15.18■□□□□ 0.02
SMC4-222ENST00000490207 ANKRD13BQ86YJ7 626 aa15.18■□□□□ 0.02
SMC4-222ENST00000490207 BORCS5Q969J3 196 aa15.18■□□□□ 0.02
SMC4-222ENST00000490207 ZNF2Q9BSG1 426 aaPredicted RBP15.18■□□□□ 0.02
SMC4-222ENST00000490207 NAA50Q9GZZ1 169 aaKnown RBP15.18■□□□□ 0.02
SMC4-222ENST00000490207 SMIM31A0A1B0GVY4 71 aa15.17■□□□□ 0.02
SMC4-222ENST00000490207 RBFOX2O43251 390 aaKnown RBP eCLIP15.17■□□□□ 0.021e-7■■■□□ 15.2
SMC4-222ENST00000490207 RBMXL2O75526 392 aaKnown RBP15.17■□□□□ 0.02
SMC4-222ENST00000490207 PRH1P02810 166 aa15.17■□□□□ 0.02
SMC4-222ENST00000490207 MAS1LP35410 378 aa15.17■□□□□ 0.02
SMC4-222ENST00000490207 RPL27AP46776 148 aaKnown RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms