RNA–Protein interactions for RNA: ENST00000489861.2

COL9A1-209, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 3

Gene COL9A1, Length 243 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-209ENST00000489861 FABP5Q01469 135 aa5.45□□□□□ -1.54
COL9A1-209ENST00000489861 ARFRP1Q13795 201 aa5.45□□□□□ -1.54
COL9A1-209ENST00000489861 INSL4Q14641 139 aa5.45□□□□□ -1.54
COL9A1-209ENST00000489861 GNMTQ14749 295 aa5.45□□□□□ -1.54
COL9A1-209ENST00000489861 OR10K2Q6IF99 312 aa5.45□□□□□ -1.54
COL9A1-209ENST00000489861 TMEM91Q6ZNR0 172 aa5.45□□□□□ -1.54
COL9A1-209ENST00000489861 SLC25A42Q86VD7 318 aa5.45□□□□□ -1.54
COL9A1-209ENST00000489861 TPRA1Q86W33 373 aa5.45□□□□□ -1.54
COL9A1-209ENST00000489861 LAX1Q8IWV1 398 aa5.45□□□□□ -1.54
COL9A1-209ENST00000489861 ODF3L1Q8IXM7 274 aa5.45□□□□□ -1.54
COL9A1-209ENST00000489861 Q8N402 240 aa5.45□□□□□ -1.54
COL9A1-209ENST00000489861 PHB2Q99623 299 aa5.45□□□□□ -1.54
COL9A1-209ENST00000489861 GINS4Q9BRT9 223 aa5.45□□□□□ -1.54
COL9A1-209ENST00000489861 NICN1Q9BSH3 213 aa5.45□□□□□ -1.54
COL9A1-209ENST00000489861 PECRQ9BY49 303 aa5.45□□□□□ -1.54
COL9A1-209ENST00000489861 FBXL15Q9H469 300 aa5.45□□□□□ -1.54
COL9A1-209ENST00000489861 SLC35D1Q9NTN3 355 aa5.45□□□□□ -1.54
COL9A1-209ENST00000489861 NDUFB11Q9NX14 153 aa5.45□□□□□ -1.54
COL9A1-209ENST00000489861 APLNQ9ULZ1 77 aa5.45□□□□□ -1.54
COL9A1-209ENST00000489861 SSR3Q9UNL2 185 aa5.45□□□□□ -1.54
COL9A1-209ENST00000489861 NUBP2Q9Y5Y2 271 aa5.45□□□□□ -1.54
COL9A1-209ENST00000489861 IFITM5A6NNB3 132 aa5.44□□□□□ -1.54
COL9A1-209ENST00000489861 ANKRD65E5RJM6 399 aa5.44□□□□□ -1.54
COL9A1-209ENST00000489861 M0R2N4 97 aa5.44□□□□□ -1.54
COL9A1-209ENST00000489861 MPPED1O15442 326 aa5.44□□□□□ -1.54
COL9A1-209ENST00000489861 FABP7O15540 132 aa5.44□□□□□ -1.54
COL9A1-209ENST00000489861 CYB5BO43169 146 aa5.44□□□□□ -1.54
COL9A1-209ENST00000489861 TUSC2O75896 110 aa5.44□□□□□ -1.54
COL9A1-209ENST00000489861 TPPPO94811 219 aa5.44□□□□□ -1.54
COL9A1-209ENST00000489861 DHFRP00374 187 aa5.44□□□□□ -1.54
COL9A1-209ENST00000489861 CA2P00918 260 aa5.44□□□□□ -1.54
COL9A1-209ENST00000489861 ATF4P18848 351 aaPredicted RBP5.44□□□□□ -1.54
COL9A1-209ENST00000489861 DTYMKP23919 212 aa5.44□□□□□ -1.54
COL9A1-209ENST00000489861 OR3A3P47888 321 aa5.44□□□□□ -1.54
COL9A1-209ENST00000489861 FXYD3Q14802 87 aa5.44□□□□□ -1.54
COL9A1-209ENST00000489861 RPEL1Q2QD12 228 aa5.44□□□□□ -1.54
COL9A1-209ENST00000489861 Q6ZS49 121 aa5.44□□□□□ -1.54
COL9A1-209ENST00000489861 WFDC3Q8IUB2 231 aa5.44□□□□□ -1.54
COL9A1-209ENST00000489861 LFNGQ8NES3 379 aa5.44□□□□□ -1.54
COL9A1-209ENST00000489861 OR10R2Q8NGX6 335 aa5.44□□□□□ -1.54
COL9A1-209ENST00000489861 VSTM2AQ8TAG5 236 aa5.44□□□□□ -1.54
COL9A1-209ENST00000489861 NRG4Q8WWG1 115 aa5.44□□□□□ -1.54
COL9A1-209ENST00000489861 SNAPC3Q92966 411 aa5.44□□□□□ -1.54
COL9A1-209ENST00000489861 ARHGAP5-AS1Q96IT6 56 aa5.44□□□□□ -1.54
COL9A1-209ENST00000489861 RHOVQ96L33 236 aa5.44□□□□□ -1.54
COL9A1-209ENST00000489861 HARBI1Q96MB7 349 aa5.44□□□□□ -1.54
COL9A1-209ENST00000489861 C18orf15Q96N68 181 aa5.44□□□□□ -1.54
COL9A1-209ENST00000489861 NEURL2Q9BR09 285 aa5.44□□□□□ -1.54
COL9A1-209ENST00000489861 AIFM2Q9BRQ8 373 aa5.44□□□□□ -1.54
COL9A1-209ENST00000489861 C11orf54Q9H0W9 315 aaPredicted RBP5.44□□□□□ -1.54
COL9A1-209ENST00000489861 DCSTAMPQ9H295 470 aa5.44□□□□□ -1.54
COL9A1-209ENST00000489861 SLC2A8Q9NY64 477 aa5.44□□□□□ -1.54
COL9A1-209ENST00000489861 RDH8Q9NYR8 311 aa5.44□□□□□ -1.54
COL9A1-209ENST00000489861 MRPS7Q9Y2R9 242 aaKnown RBP5.44□□□□□ -1.54
COL9A1-209ENST00000489861 PRELID3BQ9Y3B1 194 aa5.44□□□□□ -1.54
COL9A1-209ENST00000489861 A3GALT2U3KPV4 340 aa5.44□□□□□ -1.54
COL9A1-209ENST00000489861 TMEM272A0A1B0GTI8 110 aa5.43□□□□□ -1.54
COL9A1-209ENST00000489861 FAM223BA6NKX1 122 aa5.43□□□□□ -1.54
COL9A1-209ENST00000489861 NOTOA8MTQ0 251 aa5.43□□□□□ -1.54
COL9A1-209ENST00000489861 M0R1X1 148 aa5.43□□□□□ -1.54
COL9A1-209ENST00000489861 SHOXO15266 292 aa5.43□□□□□ -1.54
COL9A1-209ENST00000489861 OR2A4O95047 310 aa5.43□□□□□ -1.54
COL9A1-209ENST00000489861 NDUFB8O95169 186 aa5.43□□□□□ -1.54
COL9A1-209ENST00000489861 FCGR3AP08637 254 aa5.43□□□□□ -1.54
COL9A1-209ENST00000489861 SCTP09683 121 aa5.43□□□□□ -1.54
COL9A1-209ENST00000489861 RBMY1CP0DJD4 496 aa5.43□□□□□ -1.54
COL9A1-209ENST00000489861 CT45A6P0DMU7 189 aa5.43□□□□□ -1.54
COL9A1-209ENST00000489861 CT45A5P0DMU8 189 aa5.43□□□□□ -1.54
COL9A1-209ENST00000489861 CT45A7P0DMV0 189 aa5.43□□□□□ -1.54
COL9A1-209ENST00000489861 HIST1H1DP16402 221 aaKnown RBP5.43□□□□□ -1.54
COL9A1-209ENST00000489861 CD36P16671 472 aa5.43□□□□□ -1.54
COL9A1-209ENST00000489861 PSMB9P28065 219 aa5.43□□□□□ -1.54
COL9A1-209ENST00000489861 FGF9P31371 208 aaPredicted RBP5.43□□□□□ -1.54
COL9A1-209ENST00000489861 PSG5Q15238 335 aa5.43□□□□□ -1.54
COL9A1-209ENST00000489861 TIMM50Q3ZCQ8 353 aa5.43□□□□□ -1.54
COL9A1-209ENST00000489861 RPL39P5Q59GN2 51 aa5.43□□□□□ -1.54
COL9A1-209ENST00000489861 C19orf54Q5BKX5 351 aa5.43□□□□□ -1.54
COL9A1-209ENST00000489861 HES5Q5TA89 166 aa5.43□□□□□ -1.54
COL9A1-209ENST00000489861 UBE2UQ5VVX9 321 aa5.43□□□□□ -1.54
COL9A1-209ENST00000489861 CROCCP3Q8IVE0 287 aa5.43□□□□□ -1.54
COL9A1-209ENST00000489861 FAM223AQ8IWN6 122 aa5.43□□□□□ -1.54
COL9A1-209ENST00000489861 OR9G4Q8NGQ1 327 aa5.43□□□□□ -1.54
COL9A1-209ENST00000489861 GRPEL2Q8TAA5 225 aa5.43□□□□□ -1.54
COL9A1-209ENST00000489861 OSR1Q8TAX0 266 aaPredicted RBP5.43□□□□□ -1.54
COL9A1-209ENST00000489861 DYNLRB2Q8TF09 96 aa5.43□□□□□ -1.54
COL9A1-209ENST00000489861 CASTOR1Q8WTX7 329 aa5.43□□□□□ -1.54
COL9A1-209ENST00000489861 ABHD14BQ96IU4 210 aa5.43□□□□□ -1.54
COL9A1-209ENST00000489861 SPIN2AQ99865 258 aa5.43□□□□□ -1.54
COL9A1-209ENST00000489861 SPIN2BQ9BPZ2 258 aa5.43□□□□□ -1.54
COL9A1-209ENST00000489861 AGMATQ9BSE5 352 aa5.43□□□□□ -1.54
COL9A1-209ENST00000489861 CABLES2Q9BTV7 478 aa5.43□□□□□ -1.54
COL9A1-209ENST00000489861 ATG5Q9H1Y0 275 aa5.43□□□□□ -1.54
COL9A1-209ENST00000489861 VCX3AQ9NNX9 186 aa5.43□□□□□ -1.54
COL9A1-209ENST00000489861 PEF1Q9UBV8 284 aaKnown RBP5.43□□□□□ -1.54
COL9A1-209ENST00000489861 TRBV6-7A0A0A0MS04 114 aa5.42□□□□□ -1.54
COL9A1-209ENST00000489861 A0A0A6YYD4 124 aa5.42□□□□□ -1.54
COL9A1-209ENST00000489861 A0A0A6YYH2 397 aa5.42□□□□□ -1.54
COL9A1-209ENST00000489861 A6NJ64 397 aa5.42□□□□□ -1.54
COL9A1-209ENST00000489861 FOXI3A8MTJ6 420 aaPredicted RBP5.42□□□□□ -1.54
COL9A1-209ENST00000489861 OR11H12B2RN74 326 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms