RNA–Protein interactions for RNA: ENST00000489758.1

CLIC4-203, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 439 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-203ENST00000489758 C1RLQ9NZP8 487 aa12.79□□□□□ -0.36
CLIC4-203ENST00000489758 SH2D7A6NKC9 451 aaPredicted RBP12.78□□□□□ -0.36
CLIC4-203ENST00000489758 M0QZK8 103 aa12.78□□□□□ -0.36
CLIC4-203ENST00000489758 B3GALNT1O75752 331 aa12.78□□□□□ -0.36
CLIC4-203ENST00000489758 OR5AC1P0C628 307 aa12.78□□□□□ -0.36
CLIC4-203ENST00000489758 ANXA7P20073 488 aaKnown RBP12.78□□□□□ -0.36
CLIC4-203ENST00000489758 UCP1P25874 307 aa12.78□□□□□ -0.36
CLIC4-203ENST00000489758 TAS2R31P59538 309 aa12.78□□□□□ -0.36
CLIC4-203ENST00000489758 UBE2KP61086 200 aa12.78□□□□□ -0.36
CLIC4-203ENST00000489758 POU2AF1Q16633 256 aa12.78□□□□□ -0.36
CLIC4-203ENST00000489758 C5orf64Q2M2E5 130 aa12.78□□□□□ -0.36
CLIC4-203ENST00000489758 MRGPRG-AS1Q2M3A8 158 aa12.78□□□□□ -0.36
CLIC4-203ENST00000489758 Q6ZS46 218 aa12.78□□□□□ -0.36
CLIC4-203ENST00000489758 SGPP2Q8IWX5 399 aa12.78□□□□□ -0.36
CLIC4-203ENST00000489758 VKORC1L1Q8N0U8 176 aa12.78□□□□□ -0.36
CLIC4-203ENST00000489758 SPATA3Q8NHX4 192 aa12.78□□□□□ -0.36
CLIC4-203ENST00000489758 ENKURQ8TC29 256 aa12.78□□□□□ -0.36
CLIC4-203ENST00000489758 GLYATL2Q8WU03 294 aa12.78□□□□□ -0.36
CLIC4-203ENST00000489758 TMEM222Q9H0R3 208 aa12.78□□□□□ -0.36
CLIC4-203ENST00000489758 TPSG1Q9NRR2 321 aa12.78□□□□□ -0.36
CLIC4-203ENST00000489758 COMMD9Q9P000 198 aa12.78□□□□□ -0.36
CLIC4-203ENST00000489758 TRAV6A0A075B6T7 132 aa12.77□□□□□ -0.37
CLIC4-203ENST00000489758 SLC25A17O43808 307 aa12.77□□□□□ -0.37
CLIC4-203ENST00000489758 SAA1P0DJI8 122 aaPredicted RBP12.77□□□□□ -0.37
CLIC4-203ENST00000489758 MECP2P51608 486 aaKnown RBP12.77□□□□□ -0.37
CLIC4-203ENST00000489758 UBE2MP61081 183 aaKnown RBP12.77□□□□□ -0.37
CLIC4-203ENST00000489758 PPP1R1AQ13522 171 aa12.77□□□□□ -0.37
CLIC4-203ENST00000489758 TMEM187Q14656 261 aa12.77□□□□□ -0.37
CLIC4-203ENST00000489758 RHOVQ96L33 236 aa12.77□□□□□ -0.37
CLIC4-203ENST00000489758 NPFFR1Q9GZQ6 430 aa12.77□□□□□ -0.37
CLIC4-203ENST00000489758 FBXL15Q9H469 300 aa12.77□□□□□ -0.37
CLIC4-203ENST00000489758 RANBP3Q9H6Z4 567 aaPredicted RBP12.77□□□□□ -0.37
CLIC4-203ENST00000489758 ZNF702PQ9H963 129 aa12.77□□□□□ -0.37
CLIC4-203ENST00000489758 PRR13Q9NZ81 148 aa12.77□□□□□ -0.37
CLIC4-203ENST00000489758 METTL1Q9UBP6 276 aaKnown RBP12.77□□□□□ -0.37
CLIC4-203ENST00000489758 SIGLEC9Q9Y336 463 aa12.77□□□□□ -0.37
CLIC4-203ENST00000489758 NUBP2Q9Y5Y2 271 aa12.77□□□□□ -0.37
CLIC4-203ENST00000489758 FCN1O00602 326 aa12.76□□□□□ -0.37
CLIC4-203ENST00000489758 CDS2O95674 445 aa12.76□□□□□ -0.37
CLIC4-203ENST00000489758 HRASP01112 189 aa12.76□□□□□ -0.37
CLIC4-203ENST00000489758 SERPINE2P07093 398 aa12.76□□□□□ -0.37
CLIC4-203ENST00000489758 IL6RP08887 468 aaPredicted RBP12.76□□□□□ -0.37
CLIC4-203ENST00000489758 H2AFB2P0C5Z0 115 aa12.76□□□□□ -0.37
CLIC4-203ENST00000489758 NQO2P16083 231 aa12.76□□□□□ -0.37
CLIC4-203ENST00000489758 SPNP16150 400 aa12.76□□□□□ -0.37
CLIC4-203ENST00000489758 Q6ZSV7 163 aa12.76□□□□□ -0.37
CLIC4-203ENST00000489758 PUSL1Q8N0Z8 303 aaKnown RBP12.76□□□□□ -0.37
CLIC4-203ENST00000489758 Q8N2B8 174 aa12.76□□□□□ -0.37
CLIC4-203ENST00000489758 TEX45Q8NA69 505 aa12.76□□□□□ -0.37
CLIC4-203ENST00000489758 LHFPL5Q8TAF8 219 aa12.76□□□□□ -0.37
CLIC4-203ENST00000489758 R3HDM4Q96D70 268 aa12.76□□□□□ -0.37
CLIC4-203ENST00000489758 RASL11BQ9BPW5 248 aa12.76□□□□□ -0.37
CLIC4-203ENST00000489758 ALX4Q9H161 411 aaPredicted RBP12.76□□□□□ -0.37
CLIC4-203ENST00000489758 KIAA1456Q9P272 454 aa12.76□□□□□ -0.37
CLIC4-203ENST00000489758 MARCH11A6NNE9 402 aa12.75□□□□□ -0.37
CLIC4-203ENST00000489758 TSPAN9O75954 239 aa12.75□□□□□ -0.37
CLIC4-203ENST00000489758 NDUFA7O95182 113 aa12.75□□□□□ -0.37
CLIC4-203ENST00000489758 SFT2D2O95562 160 aa12.75□□□□□ -0.37
CLIC4-203ENST00000489758 PTTG1O95997 202 aa12.75□□□□□ -0.37
CLIC4-203ENST00000489758 HLA-DRB1P01911 266 aa12.75□□□□□ -0.37
CLIC4-203ENST00000489758 CRYBA1P05813 215 aa12.75□□□□□ -0.37
CLIC4-203ENST00000489758 OR4E1P0C645 316 aa12.75□□□□□ -0.37
CLIC4-203ENST00000489758 RPA2P15927 270 aa12.75□□□□□ -0.37
CLIC4-203ENST00000489758 KRTAP24-1Q3LI83 254 aa12.75□□□□□ -0.37
CLIC4-203ENST00000489758 VMA21Q3ZAQ7 101 aa12.75□□□□□ -0.37
CLIC4-203ENST00000489758 LIN54Q6MZP7 749 aa12.75□□□□□ -0.37
CLIC4-203ENST00000489758 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.75□□□□□ -0.37
CLIC4-203ENST00000489758 SEC22AQ96IW7 307 aa12.75□□□□□ -0.37
CLIC4-203ENST00000489758 TMEM56Q96MV1 263 aa12.75□□□□□ -0.37
CLIC4-203ENST00000489758 HSPB9Q9BQS6 159 aa12.75□□□□□ -0.37
CLIC4-203ENST00000489758 BEX1Q9HBH7 125 aa12.75□□□□□ -0.37
CLIC4-203ENST00000489758 KCNIP3Q9Y2W7 256 aa12.75□□□□□ -0.37
CLIC4-203ENST00000489758 TMEM56-RWDD3S4R434 201 aa12.75□□□□□ -0.37
CLIC4-203ENST00000489758 C9orf170A2RU37 121 aa12.74□□□□□ -0.37
CLIC4-203ENST00000489758 OR2A4O95047 310 aa12.74□□□□□ -0.37
CLIC4-203ENST00000489758 KRASP01116 189 aa12.74□□□□□ -0.37
CLIC4-203ENST00000489758 IGKV1-5P01602 117 aa12.74□□□□□ -0.37
CLIC4-203ENST00000489758 P0C879 139 aa12.74□□□□□ -0.37
CLIC4-203ENST00000489758 VAMP1P23763 118 aa12.74□□□□□ -0.37
CLIC4-203ENST00000489758 G6PCP35575 357 aa12.74□□□□□ -0.37
CLIC4-203ENST00000489758 SSBP2P81877 361 aaPredicted RBP12.74□□□□□ -0.37
CLIC4-203ENST00000489758 PJVKQ0ZLH3 352 aa12.74□□□□□ -0.37
CLIC4-203ENST00000489758 DHRS2Q13268 280 aa12.74□□□□□ -0.37
CLIC4-203ENST00000489758 TRIM16LQ309B1 348 aa12.74□□□□□ -0.37
CLIC4-203ENST00000489758 ANKRD55Q3KP44 614 aa12.74□□□□□ -0.37
CLIC4-203ENST00000489758 OR4A47Q6IF82 309 aa12.74□□□□□ -0.37
CLIC4-203ENST00000489758 SSX9Q7RTT3 188 aa12.74□□□□□ -0.37
CLIC4-203ENST00000489758 PPP1R27Q86WC6 154 aa12.74□□□□□ -0.37
CLIC4-203ENST00000489758 SELENOHQ8IZQ5 122 aaKnown RBP12.74□□□□□ -0.37
CLIC4-203ENST00000489758 CADM3Q8N126 398 aa12.74□□□□□ -0.37
CLIC4-203ENST00000489758 TMEM167AQ8TBQ9 72 aa12.74□□□□□ -0.37
CLIC4-203ENST00000489758 OR2A7Q96R45 310 aa12.74□□□□□ -0.37
CLIC4-203ENST00000489758 AIFM2Q9BRQ8 373 aa12.74□□□□□ -0.37
CLIC4-203ENST00000489758 MARVELD1Q9BSK0 173 aa12.74□□□□□ -0.37
CLIC4-203ENST00000489758 PRSS22Q9GZN4 317 aa12.74□□□□□ -0.37
CLIC4-203ENST00000489758 BET1LQ9NYM9 111 aa12.74□□□□□ -0.37
CLIC4-203ENST00000489758 IGHV7-81A0A0B4J1V7 117 aa12.73□□□□□ -0.37
CLIC4-203ENST00000489758 KBTBD11O94819 623 aa12.73□□□□□ -0.37
CLIC4-203ENST00000489758 HKR1P10072 659 aa12.73□□□□□ -0.37
CLIC4-203ENST00000489758 RAB25P57735 213 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms