RNA–Protein interactions for RNA: ENST00000489611.5

COL9A1-208, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,940 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-208ENST00000489611 ETV3LQ6ZN32 361 aa12.37□□□□□ -0.43
COL9A1-208ENST00000489611 C1orf87Q8N0U7 546 aa12.37□□□□□ -0.43
COL9A1-208ENST00000489611 LHX4Q969G2 390 aa12.37□□□□□ -0.43
COL9A1-208ENST00000489611 ACTR3CQ9C0K3 210 aaPredicted RBP12.37□□□□□ -0.43
COL9A1-208ENST00000489611 MANBALQ9NQG1 85 aa12.37□□□□□ -0.43
COL9A1-208ENST00000489611 KCNIP2Q9NS61 270 aa12.37□□□□□ -0.43
COL9A1-208ENST00000489611 Q9UFV3 132 aa12.37□□□□□ -0.43
COL9A1-208ENST00000489611 TANC2Q9HCD6 1990 aa12.36□□□□□ -0.43
COL9A1-208ENST00000489611 CACNA1AO00555 2505 aa12.36□□□□□ -0.43
COL9A1-208ENST00000489611 DSCAML1Q8TD84 2053 aa12.36□□□□□ -0.43
COL9A1-208ENST00000489611 hADV38S2A0JD32 116 aa12.36□□□□□ -0.43
COL9A1-208ENST00000489611 ZFP92A6NM28 416 aa12.36□□□□□ -0.43
COL9A1-208ENST00000489611 CYB5BO43169 146 aa12.36□□□□□ -0.43
COL9A1-208ENST00000489611 AKR1C3P42330 323 aa12.36□□□□□ -0.43
COL9A1-208ENST00000489611 OR2B8PP59922 312 aa12.36□□□□□ -0.43
COL9A1-208ENST00000489611 MEF2CQ06413 473 aaPredicted RBP12.36□□□□□ -0.43
COL9A1-208ENST00000489611 TMEM249Q2WGJ8 235 aa12.36□□□□□ -0.43
COL9A1-208ENST00000489611 GAFA1Q96PS6 74 aa12.36□□□□□ -0.43
COL9A1-208ENST00000489611 QTRT1Q9BXR0 403 aaKnown RBP12.36□□□□□ -0.43
COL9A1-208ENST00000489611 NPCDR1Q9BY65 106 aa12.36□□□□□ -0.43
COL9A1-208ENST00000489611 VSIRQ9H7M9 311 aa12.36□□□□□ -0.43
COL9A1-208ENST00000489611 CHD8Q9HCK8 2581 aa12.35□□□□□ -0.43
COL9A1-208ENST00000489611 TRAV38-1A0A0B4J264 116 aa12.35□□□□□ -0.43
COL9A1-208ENST00000489611 TMEM250H0YL14 139 aa12.35□□□□□ -0.43
COL9A1-208ENST00000489611 HRASP01112 189 aa12.35□□□□□ -0.43
COL9A1-208ENST00000489611 CCKARP32238 428 aa12.35□□□□□ -0.43
COL9A1-208ENST00000489611 ZNF134P52741 427 aa12.35□□□□□ -0.43
COL9A1-208ENST00000489611 DLK1P80370 383 aa12.35□□□□□ -0.43
COL9A1-208ENST00000489611 RBPJQ06330 500 aa12.35□□□□□ -0.43
COL9A1-208ENST00000489611 POU2AF1Q16633 256 aa12.35□□□□□ -0.43
COL9A1-208ENST00000489611 ACOT6Q3I5F7 207 aaPredicted RBP12.35□□□□□ -0.43
COL9A1-208ENST00000489611 RPP25LQ8N5L8 163 aaKnown RBP12.35□□□□□ -0.43
COL9A1-208ENST00000489611 ZDHHC16Q969W1 377 aa12.35□□□□□ -0.43
COL9A1-208ENST00000489611 IDI2-AS1Q9NZ38 188 aa12.35□□□□□ -0.43
COL9A1-208ENST00000489611 SH3BGRL2Q9UJC5 107 aa12.35□□□□□ -0.43
COL9A1-208ENST00000489611 LINC00312Q9Y6C7 94 aa12.35□□□□□ -0.43
COL9A1-208ENST00000489611 C15orf62A8K5M9 175 aa12.35□□□□□ -0.43
COL9A1-208ENST00000489611 S100A6P06703 90 aa12.35□□□□□ -0.43
COL9A1-208ENST00000489611 OR9G9P0C7N8 305 aa12.35□□□□□ -0.43
COL9A1-208ENST00000489611 CD1BP29016 333 aa12.35□□□□□ -0.43
COL9A1-208ENST00000489611 PSMB3P49720 205 aa12.35□□□□□ -0.43
COL9A1-208ENST00000489611 ELLP55199 621 aaPredicted RBP12.35□□□□□ -0.43
COL9A1-208ENST00000489611 RAB11AP62491 216 aa12.35□□□□□ -0.43
COL9A1-208ENST00000489611 SPRNQ5BIV9 151 aa12.35□□□□□ -0.43
COL9A1-208ENST00000489611 LINC00518Q8N0U6 118 aa12.35□□□□□ -0.43
COL9A1-208ENST00000489611 OR10G9Q8NGN4 311 aa12.35□□□□□ -0.43
COL9A1-208ENST00000489611 OR10G7Q8NGN6 311 aa12.35□□□□□ -0.43
COL9A1-208ENST00000489611 GAL3ST2Q9H3Q3 398 aa12.35□□□□□ -0.43
COL9A1-208ENST00000489611 WDR83OSQ9Y284 106 aa12.35□□□□□ -0.43
COL9A1-208ENST00000489611 A0A1W2PPH5 198 aa12.34□□□□□ -0.43
COL9A1-208ENST00000489611 C17orf100A8MU93 164 aa12.34□□□□□ -0.43
COL9A1-208ENST00000489611 CEBPGP53567 150 aa12.34□□□□□ -0.43
COL9A1-208ENST00000489611 ATP5IP56385 69 aaPredicted RBP12.34□□□□□ -0.43
COL9A1-208ENST00000489611 RELBQ01201 579 aa12.34□□□□□ -0.43
COL9A1-208ENST00000489611 MEF2BQ02080 365 aaPredicted RBP12.34□□□□□ -0.43
COL9A1-208ENST00000489611 KLRB1Q12918 225 aa12.34□□□□□ -0.43
COL9A1-208ENST00000489611 HABP2Q14520 560 aaPredicted RBP12.34□□□□□ -0.43
COL9A1-208ENST00000489611 RPL39P5Q59GN2 51 aa12.34□□□□□ -0.43
COL9A1-208ENST00000489611 CT45A1Q5HYN5 189 aa12.34□□□□□ -0.43
COL9A1-208ENST00000489611 FAM90A2PQ658T7 463 aa12.34□□□□□ -0.43
COL9A1-208ENST00000489611 FAM24BQ8N5W8 94 aa12.34□□□□□ -0.43
COL9A1-208ENST00000489611 CT45A3Q8NHU0 189 aa12.34□□□□□ -0.43
COL9A1-208ENST00000489611 CA5BP1Q8WTZ4 195 aa12.34□□□□□ -0.43
COL9A1-208ENST00000489611 RAB1CQ92928 201 aa12.34□□□□□ -0.43
COL9A1-208ENST00000489611 HEYLQ9NQ87 328 aaPredicted RBP12.34□□□□□ -0.43
COL9A1-208ENST00000489611 TMEM140Q9NV12 185 aa12.34□□□□□ -0.43
COL9A1-208ENST00000489611 FOXA2Q9Y261 457 aaPredicted RBP12.34□□□□□ -0.43
COL9A1-208ENST00000489611 IFNA10P01566 189 aa12.33□□□□□ -0.44
COL9A1-208ENST00000489611 MRPS11P82912 194 aaKnown RBP12.33□□□□□ -0.44
COL9A1-208ENST00000489611 LY6DQ14210 128 aa12.33□□□□□ -0.44
COL9A1-208ENST00000489611 FFAR4Q5NUL3 377 aa12.33□□□□□ -0.44
COL9A1-208ENST00000489611 ZNF439Q8NDP4 499 aa12.33□□□□□ -0.44
COL9A1-208ENST00000489611 ISOC2Q96AB3 205 aa12.33□□□□□ -0.44
COL9A1-208ENST00000489611 YPEL4Q96NS1 127 aa12.33□□□□□ -0.44
COL9A1-208ENST00000489611 RPUSD1Q9UJJ7 312 aaKnown RBP12.33□□□□□ -0.44
COL9A1-208ENST00000489611 DSCAMO60469 2012 aa12.33□□□□□ -0.44
COL9A1-208ENST00000489611 SAA2-SAA4A0A096LPE2 208 aa12.33□□□□□ -0.44
COL9A1-208ENST00000489611 A0A1W2PPE2 198 aa12.33□□□□□ -0.44
COL9A1-208ENST00000489611 SMCO3A2RU48 225 aa12.33□□□□□ -0.44
COL9A1-208ENST00000489611 C15orf61A6NNL5 157 aa12.33□□□□□ -0.44
COL9A1-208ENST00000489611 TGOLN2O43493 480 aa12.33□□□□□ -0.44
COL9A1-208ENST00000489611 CYB5R3P00387 301 aaPredicted RBP12.33□□□□□ -0.44
COL9A1-208ENST00000489611 SAA2P0DJI9 122 aaPredicted RBP12.33□□□□□ -0.44
COL9A1-208ENST00000489611 VDAC2P45880 294 aaPredicted RBP12.33□□□□□ -0.44
COL9A1-208ENST00000489611 ADIPOQQ15848 244 aa12.33□□□□□ -0.44
COL9A1-208ENST00000489611 ACSM6Q6P461 480 aa12.33□□□□□ -0.44
COL9A1-208ENST00000489611 HEPN1Q6WQI6 88 aa12.33□□□□□ -0.44
COL9A1-208ENST00000489611 SLC25A48Q6ZT89 311 aaKnown RBP12.33□□□□□ -0.44
COL9A1-208ENST00000489611 CTDSP1Q9GZU7 261 aa12.33□□□□□ -0.44
COL9A1-208ENST00000489611 ZNF257Q9Y2Q1 563 aa12.33□□□□□ -0.44
COL9A1-208ENST00000489611 SEC14L6B5MCN3 397 aa12.32□□□□□ -0.44
COL9A1-208ENST00000489611 FNDC10F2Z333 226 aa12.32□□□□□ -0.44
COL9A1-208ENST00000489611 OR4A8P0C604 315 aa12.32□□□□□ -0.44
COL9A1-208ENST00000489611 DAOP14920 347 aa12.32□□□□□ -0.44
COL9A1-208ENST00000489611 RTL8BQ17RB0 113 aa12.32□□□□□ -0.44
COL9A1-208ENST00000489611 RHOVQ96L33 236 aa12.32□□□□□ -0.44
COL9A1-208ENST00000489611 TXNDC17Q9BRA2 123 aa12.32□□□□□ -0.44
COL9A1-208ENST00000489611 TMEM14BQ9NUH8 114 aa12.32□□□□□ -0.44
COL9A1-208ENST00000489611 PRNDQ9UKY0 176 aa12.32□□□□□ -0.44
COL9A1-208ENST00000489611 HCFC1P51610 2035 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms