RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 SDHAF2Q9NX18 166 aa8.95□□□□□ -0.98
ACTN4-206ENST00000489451 ANKRD34BA5PLL1 514 aa8.94□□□□□ -0.98
ACTN4-206ENST00000489451 IZUMO1RA6ND01 250 aa8.94□□□□□ -0.98
ACTN4-206ENST00000489451 H3BUA1 57 aa8.94□□□□□ -0.98
ACTN4-206ENST00000489451 CSN3P07498 182 aa8.94□□□□□ -0.98
ACTN4-206ENST00000489451 TAGLNQ01995 201 aaKnown RBP8.94□□□□□ -0.98
ACTN4-206ENST00000489451 ZNF343Q6P1L6 599 aa8.94□□□□□ -0.98
ACTN4-206ENST00000489451 ADAMTSL5Q6ZMM2 481 aa8.94□□□□□ -0.98
ACTN4-206ENST00000489451 OR9G4Q8NGQ1 327 aa8.94□□□□□ -0.98
ACTN4-206ENST00000489451 MAFIPQ8WZ33 124 aa8.94□□□□□ -0.98
ACTN4-206ENST00000489451 OR2D2Q9H210 308 aa8.94□□□□□ -0.98
ACTN4-206ENST00000489451 RANGRFQ9HD47 186 aaPredicted RBP8.94□□□□□ -0.98
ACTN4-206ENST00000489451 TRAV18A0A075B6X5 111 aa8.93□□□□□ -0.98
ACTN4-206ENST00000489451 IGKV1D-8A0A087WSZ0 117 aa8.93□□□□□ -0.98
ACTN4-206ENST00000489451 TMEM235A6NFC5 223 aa8.93□□□□□ -0.98
ACTN4-206ENST00000489451 BRI3O95415 125 aa8.93□□□□□ -0.98
ACTN4-206ENST00000489451 APELAP0DMC3 54 aa8.93□□□□□ -0.98
ACTN4-206ENST00000489451 ZP3P21754 424 aa8.93□□□□□ -0.98
ACTN4-206ENST00000489451 MECP2P51608 486 aaKnown RBP8.93□□□□□ -0.98
ACTN4-206ENST00000489451 SYNJ2BPP57105 145 aa8.93□□□□□ -0.98
ACTN4-206ENST00000489451 HAGHQ16775 308 aa8.93□□□□□ -0.98
ACTN4-206ENST00000489451 DDB2Q92466 427 aa8.93□□□□□ -0.98
ACTN4-206ENST00000489451 YIPF6Q96EC8 236 aa8.93□□□□□ -0.98
ACTN4-206ENST00000489451 S100A16Q96FQ6 103 aaKnown RBP8.93□□□□□ -0.98
ACTN4-206ENST00000489451 TINAGL1Q9GZM7 467 aaPredicted RBP8.93□□□□□ -0.98
ACTN4-206ENST00000489451 SPATA2Q9UM82 520 aa8.93□□□□□ -0.98
ACTN4-206ENST00000489451 ALMS1Q8TCU4 4167 aa8.92□□□□□ -0.98
ACTN4-206ENST00000489451 C13orf42A0A1B0GVH6 325 aa8.92□□□□□ -0.98
ACTN4-206ENST00000489451 SLC22A5O76082 557 aa8.92□□□□□ -0.98
ACTN4-206ENST00000489451 RRASP10301 218 aa8.92□□□□□ -0.98
ACTN4-206ENST00000489451 ARPC4P59998 168 aa8.92□□□□□ -0.98
ACTN4-206ENST00000489451 LSM3P62310 102 aaKnown RBP8.92□□□□□ -0.98
ACTN4-206ENST00000489451 ZNF45Q02386 682 aa8.92□□□□□ -0.98
ACTN4-206ENST00000489451 RTL8BQ17RB0 113 aa8.92□□□□□ -0.98
ACTN4-206ENST00000489451 TMEM177Q53S58 311 aa8.92□□□□□ -0.98
ACTN4-206ENST00000489451 CNIH2Q6PI25 160 aa8.92□□□□□ -0.98
ACTN4-206ENST00000489451 ANKRD13BQ86YJ7 626 aa8.92□□□□□ -0.98
ACTN4-206ENST00000489451 H1FOOQ8IZA3 346 aaPredicted RBP8.92□□□□□ -0.98
ACTN4-206ENST00000489451 ADAD2Q8NCV1 583 aaKnown RBP8.92□□□□□ -0.98
ACTN4-206ENST00000489451 BVESQ8NE79 360 aa8.92□□□□□ -0.98
ACTN4-206ENST00000489451 NUDCD2Q8WVJ2 157 aa8.92□□□□□ -0.98
ACTN4-206ENST00000489451 ADTRPQ96IZ2 230 aa8.92□□□□□ -0.98
ACTN4-206ENST00000489451 HARBI1Q96MB7 349 aa8.92□□□□□ -0.98
ACTN4-206ENST00000489451 ELOVL1Q9BW60 279 aa8.92□□□□□ -0.98
ACTN4-206ENST00000489451 RETNQ9HD89 108 aa8.92□□□□□ -0.98
ACTN4-206ENST00000489451 ZNF355PQ9NSJ1 428 aa8.92□□□□□ -0.98
ACTN4-206ENST00000489451 ANXA10Q9UJ72 324 aa8.92□□□□□ -0.98
ACTN4-206ENST00000489451 ELF5Q9UKW6 265 aaPredicted RBP8.92□□□□□ -0.98
ACTN4-206ENST00000489451 LINC00473A8K010 186 aa8.91□□□□□ -0.98
ACTN4-206ENST00000489451 PRH1P02810 166 aa8.91□□□□□ -0.98
ACTN4-206ENST00000489451 EDN2P20800 178 aa8.91□□□□□ -0.98
ACTN4-206ENST00000489451 CD40LGP29965 261 aa8.91□□□□□ -0.98
ACTN4-206ENST00000489451 RPS19P39019 145 aaKnown RBP8.91□□□□□ -0.98
ACTN4-206ENST00000489451 CBX5P45973 191 aa8.91□□□□□ -0.98
ACTN4-206ENST00000489451 LGALS7P47929 136 aa8.91□□□□□ -0.98
ACTN4-206ENST00000489451 LINC00322Q6ZN03 302 aaPredicted RBP8.91□□□□□ -0.98
ACTN4-206ENST00000489451 IDO2Q6ZQW0 420 aa8.91□□□□□ -0.98
ACTN4-206ENST00000489451 SGPP2Q8IWX5 399 aa8.91□□□□□ -0.98
ACTN4-206ENST00000489451 OR5H6Q8NGV6 325 aa8.91□□□□□ -0.98
ACTN4-206ENST00000489451 KCTD12Q96CX2 325 aaKnown RBP8.91□□□□□ -0.98
ACTN4-206ENST00000489451 SLC25A38Q96DW6 304 aa8.91□□□□□ -0.98
ACTN4-206ENST00000489451 FUNDC2Q9BWH2 189 aa8.91□□□□□ -0.98
ACTN4-206ENST00000489451 SIGLEC8Q9NYZ4 499 aa8.91□□□□□ -0.98
ACTN4-206ENST00000489451 PEF1Q9UBV8 284 aaKnown RBP8.91□□□□□ -0.98
ACTN4-206ENST00000489451 OR2W1Q9Y3N9 320 aa8.91□□□□□ -0.98
ACTN4-206ENST00000489451 DMRT1Q9Y5R6 373 aa8.91□□□□□ -0.98
ACTN4-206ENST00000489451 A0A0G2JLM5 398 aa8.9□□□□□ -0.98
ACTN4-206ENST00000489451 SMIM31A0A1B0GVY4 71 aa8.9□□□□□ -0.98
ACTN4-206ENST00000489451 BMPR1BO00238 502 aa8.9□□□□□ -0.98
ACTN4-206ENST00000489451 XRCC3O43542 346 aa8.9□□□□□ -0.98
ACTN4-206ENST00000489451 CNIH1O95406 144 aa8.9□□□□□ -0.98
ACTN4-206ENST00000489451 DUTP33316 252 aaKnown RBP8.9□□□□□ -0.98
ACTN4-206ENST00000489451 UBE2NLQ5JXB2 153 aa8.9□□□□□ -0.98
ACTN4-206ENST00000489451 C10orf55Q5SWW7 151 aa8.9□□□□□ -0.98
ACTN4-206ENST00000489451 SAMD12Q8N8I0 201 aa8.9□□□□□ -0.98
ACTN4-206ENST00000489451 BEST4Q8NFU0 473 aa8.9□□□□□ -0.98
ACTN4-206ENST00000489451 SLC25A46Q96AG3 418 aa8.9□□□□□ -0.98
ACTN4-206ENST00000489451 ISOC1Q96CN7 298 aa8.9□□□□□ -0.98
ACTN4-206ENST00000489451 AUNIPQ9H7T9 357 aa8.9□□□□□ -0.98
ACTN4-206ENST00000489451 PRELID3BQ9Y3B1 194 aa8.9□□□□□ -0.98
ACTN4-206ENST00000489451 TRBV9A0A0B4J1U6 114 aa8.89□□□□□ -0.99
ACTN4-206ENST00000489451 MSGN1A6NI15 193 aa8.89□□□□□ -0.99
ACTN4-206ENST00000489451 SHOXO15266 292 aa8.89□□□□□ -0.99
ACTN4-206ENST00000489451 SSX5O60225 188 aa8.89□□□□□ -0.99
ACTN4-206ENST00000489451 JTBO76095 146 aa8.89□□□□□ -0.99
ACTN4-206ENST00000489451 IGLV2-14P01704 120 aa8.89□□□□□ -0.99
ACTN4-206ENST00000489451 NFYAP23511 347 aaPredicted RBP8.89□□□□□ -0.99
ACTN4-206ENST00000489451 UBE2KP61086 200 aa8.89□□□□□ -0.99
ACTN4-206ENST00000489451 PRSS8Q16651 343 aa8.89□□□□□ -0.99
ACTN4-206ENST00000489451 TMEM69Q5SWH9 247 aa8.89□□□□□ -0.99
ACTN4-206ENST00000489451 C19orf35Q6ZS72 473 aa8.89□□□□□ -0.99
ACTN4-206ENST00000489451 HOGA1Q86XE5 327 aa8.89□□□□□ -0.99
ACTN4-206ENST00000489451 ZNF645Q8N7E2 425 aa8.89□□□□□ -0.99
ACTN4-206ENST00000489451 OR13F1Q8NGS4 319 aa8.89□□□□□ -0.99
ACTN4-206ENST00000489451 SRSF12Q8WXF0 261 aaKnown RBP8.89□□□□□ -0.99
ACTN4-206ENST00000489451 TMEM68Q96MH6 324 aa8.89□□□□□ -0.99
ACTN4-206ENST00000489451 SPATA25Q9BR10 227 aa8.89□□□□□ -0.99
ACTN4-206ENST00000489451 WFDC10AQ9H1F0 79 aa8.89□□□□□ -0.99
ACTN4-206ENST00000489451 AKIP1Q9NQ31 210 aa8.89□□□□□ -0.99
ACTN4-206ENST00000489451 IFT46Q9NQC8 304 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms