RNA–Protein interactions for RNA: ENST00000489403.1

CPSF3-204, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 5

Gene CPSF3, Length 688 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-204ENST00000489403 OSR1Q8TAX0 266 aaPredicted RBP9.37□□□□□ -0.91
CPSF3-204ENST00000489403 MGLLQ99685 303 aa9.37□□□□□ -0.91
CPSF3-204ENST00000489403 NEURL2Q9BR09 285 aa9.37□□□□□ -0.91
CPSF3-204ENST00000489403 WFDC10AQ9H1F0 79 aa9.37□□□□□ -0.91
CPSF3-204ENST00000489403 ZNF430Q9H8G1 570 aaPredicted RBP9.37□□□□□ -0.91
CPSF3-204ENST00000489403 A0A075B6Q4 140 aa9.36□□□□□ -0.91
CPSF3-204ENST00000489403 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.36□□□□□ -0.91
CPSF3-204ENST00000489403 ZNF785A8K8V0 405 aa9.36□□□□□ -0.91
CPSF3-204ENST00000489403 GADD45AP24522 165 aa9.36□□□□□ -0.91
CPSF3-204ENST00000489403 MAP2K4P45985 399 aa9.36□□□□□ -0.91
CPSF3-204ENST00000489403 ATP5G2Q06055 141 aa9.36□□□□□ -0.91
CPSF3-204ENST00000489403 CDK10Q15131 360 aa9.36□□□□□ -0.91
CPSF3-204ENST00000489403 Q6ZS49 121 aa9.36□□□□□ -0.91
CPSF3-204ENST00000489403 LAX1Q8IWV1 398 aa9.36□□□□□ -0.91
CPSF3-204ENST00000489403 TTC9CQ8N5M4 171 aa9.36□□□□□ -0.91
CPSF3-204ENST00000489403 DEFB125Q8N687 156 aa9.36□□□□□ -0.91
CPSF3-204ENST00000489403 DYNLRB2Q8TF09 96 aa9.36□□□□□ -0.91
CPSF3-204ENST00000489403 CCDC90BQ9GZT6 254 aa9.36□□□□□ -0.91
CPSF3-204ENST00000489403 ACOT13Q9NPJ3 140 aa9.36□□□□□ -0.91
CPSF3-204ENST00000489403 ELF5Q9UKW6 265 aaPredicted RBP9.36□□□□□ -0.91
CPSF3-204ENST00000489403 DMRT1Q9Y5R6 373 aa9.36□□□□□ -0.91
CPSF3-204ENST00000489403 ALMS1Q8TCU4 4167 aa9.36□□□□□ -0.91
CPSF3-204ENST00000489403 RBMY1BA6NDE4 496 aaKnown RBP9.35□□□□□ -0.91
CPSF3-204ENST00000489403 RBMY1EA6NEQ0 496 aaKnown RBP9.35□□□□□ -0.91
CPSF3-204ENST00000489403 IFITM5A6NNB3 132 aa9.35□□□□□ -0.91
CPSF3-204ENST00000489403 J3QRK9 145 aa9.35□□□□□ -0.91
CPSF3-204ENST00000489403 TUSC2O75896 110 aa9.35□□□□□ -0.91
CPSF3-204ENST00000489403 OR2J3O76001 311 aa9.35□□□□□ -0.91
CPSF3-204ENST00000489403 JTBO76095 146 aa9.35□□□□□ -0.91
CPSF3-204ENST00000489403 TPPPO94811 219 aa9.35□□□□□ -0.91
CPSF3-204ENST00000489403 RBMY1DP0C7P1 496 aaKnown RBP9.35□□□□□ -0.91
CPSF3-204ENST00000489403 RAB6AP20340 208 aa9.35□□□□□ -0.91
CPSF3-204ENST00000489403 SSX1Q16384 188 aa9.35□□□□□ -0.91
CPSF3-204ENST00000489403 DEFB114Q30KQ6 69 aa9.35□□□□□ -0.91
CPSF3-204ENST00000489403 C19orf35Q6ZS72 473 aa9.35□□□□□ -0.91
CPSF3-204ENST00000489403 PRSS48Q7RTY5 328 aa9.35□□□□□ -0.91
CPSF3-204ENST00000489403 ZNF645Q8N7E2 425 aa9.35□□□□□ -0.91
CPSF3-204ENST00000489403 SPIN2AQ99865 258 aa9.35□□□□□ -0.91
CPSF3-204ENST00000489403 SPIN2BQ9BPZ2 258 aa9.35□□□□□ -0.91
CPSF3-204ENST00000489403 SRD5A3Q9H8P0 318 aa9.35□□□□□ -0.91
CPSF3-204ENST00000489403 ZC4H2Q9NQZ6 224 aa9.35□□□□□ -0.91
CPSF3-204ENST00000489403 SLC2A8Q9NY64 477 aa9.35□□□□□ -0.91
CPSF3-204ENST00000489403 NKX1-2Q9UD57 310 aaPredicted RBP9.35□□□□□ -0.91
CPSF3-204ENST00000489403 HMX3A6NHT5 357 aa9.34□□□□□ -0.91
CPSF3-204ENST00000489403 C2orf70A6NJV1 201 aa9.34□□□□□ -0.91
CPSF3-204ENST00000489403 TEX22C9J3V5 150 aa9.34□□□□□ -0.91
CPSF3-204ENST00000489403 PPP5D1E7EU14 171 aa9.34□□□□□ -0.91
CPSF3-204ENST00000489403 PDCD5O14737 125 aa9.34□□□□□ -0.91
CPSF3-204ENST00000489403 CREBL2O60519 120 aaPredicted RBP9.34□□□□□ -0.91
CPSF3-204ENST00000489403 FCGR3BO75015 233 aa9.34□□□□□ -0.91
CPSF3-204ENST00000489403 ACTL6BO94805 426 aa9.34□□□□□ -0.91
CPSF3-204ENST00000489403 HLA-AP01891 365 aaKnown RBP9.34□□□□□ -0.91
CPSF3-204ENST00000489403 DTYMKP23919 212 aa9.34□□□□□ -0.91
CPSF3-204ENST00000489403 CRHBPP24387 322 aa9.34□□□□□ -0.91
CPSF3-204ENST00000489403 TALDO1P37837 337 aa9.34□□□□□ -0.91
CPSF3-204ENST00000489403 RPL30P62888 115 aaKnown RBP9.34□□□□□ -0.91
CPSF3-204ENST00000489403 ARFRP1Q13795 201 aa9.34□□□□□ -0.91
CPSF3-204ENST00000489403 C15orf32Q32M92 178 aa9.34□□□□□ -0.91
CPSF3-204ENST00000489403 OR2B11Q5JQS5 317 aa9.34□□□□□ -0.91
CPSF3-204ENST00000489403 KCTD9Q7L273 389 aa9.34□□□□□ -0.91
CPSF3-204ENST00000489403 MMD2Q8IY49 270 aa9.34□□□□□ -0.91
CPSF3-204ENST00000489403 NECAP1Q8NC96 275 aa9.34□□□□□ -0.91
CPSF3-204ENST00000489403 KCTD12Q96CX2 325 aaKnown RBP9.34□□□□□ -0.91
CPSF3-204ENST00000489403 DCUN1D5Q9BTE7 237 aa9.34□□□□□ -0.91
CPSF3-204ENST00000489403 CENPOQ9BU64 300 aa9.34□□□□□ -0.91
CPSF3-204ENST00000489403 TRAV1-2A0A0B4J238 106 aa9.33□□□□□ -0.92
CPSF3-204ENST00000489403 OR11H12B2RN74 326 aa9.33□□□□□ -0.92
CPSF3-204ENST00000489403 IGLV2-14P01704 120 aa9.33□□□□□ -0.92
CPSF3-204ENST00000489403 FOLR2P14207 255 aa9.33□□□□□ -0.92
CPSF3-204ENST00000489403 RAB3BP20337 219 aa9.33□□□□□ -0.92
CPSF3-204ENST00000489403 NFYAP23511 347 aaPredicted RBP9.33□□□□□ -0.92
CPSF3-204ENST00000489403 MYL9P24844 172 aa9.33□□□□□ -0.92
CPSF3-204ENST00000489403 KIR2DS2P43631 304 aa9.33□□□□□ -0.92
CPSF3-204ENST00000489403 TBCEQ15813 527 aaPredicted RBP9.33□□□□□ -0.92
CPSF3-204ENST00000489403 SLC25A42Q86VD7 318 aa9.33□□□□□ -0.92
CPSF3-204ENST00000489403 NR2C2APQ86WQ0 139 aa9.33□□□□□ -0.92
CPSF3-204ENST00000489403 VKORC1L1Q8N0U8 176 aa9.33□□□□□ -0.92
CPSF3-204ENST00000489403 IL17DQ8TAD2 202 aa9.33□□□□□ -0.92
CPSF3-204ENST00000489403 NRG4Q8WWG1 115 aa9.33□□□□□ -0.92
CPSF3-204ENST00000489403 WDR89Q96FK6 387 aaPredicted RBP9.33□□□□□ -0.92
CPSF3-204ENST00000489403 RBMX2Q9Y388 322 aaKnown RBP9.33□□□□□ -0.92
CPSF3-204ENST00000489403 PRELID3BQ9Y3B1 194 aa9.33□□□□□ -0.92
CPSF3-204ENST00000489403 IGKV1D-13A0A0B4J2D9 117 aa9.32□□□□□ -0.92
CPSF3-204ENST00000489403 METTL21EPA6NDL7 271 aa9.32□□□□□ -0.92
CPSF3-204ENST00000489403 ANKRD65E5RJM6 399 aa9.32□□□□□ -0.92
CPSF3-204ENST00000489403 E7EUB6 86 aa9.32□□□□□ -0.92
CPSF3-204ENST00000489403 LGALS9O00182 355 aa9.32□□□□□ -0.92
CPSF3-204ENST00000489403 GGCTO75223 188 aaKnown RBP9.32□□□□□ -0.92
CPSF3-204ENST00000489403 OR2C1O95371 312 aa9.32□□□□□ -0.92
CPSF3-204ENST00000489403 IGHV3-23P01764 117 aa9.32□□□□□ -0.92
CPSF3-204ENST00000489403 HLA-DQB1P01920 261 aa9.32□□□□□ -0.92
CPSF3-204ENST00000489403 IGKV1-13P0DP09 117 aa9.32□□□□□ -0.92
CPSF3-204ENST00000489403 CD36P16671 472 aa9.32□□□□□ -0.92
CPSF3-204ENST00000489403 GUCA2BQ16661 112 aa9.32□□□□□ -0.92
CPSF3-204ENST00000489403 FAM209BQ5JX69 171 aa9.32□□□□□ -0.92
CPSF3-204ENST00000489403 ZNF367Q7RTV3 350 aa9.32□□□□□ -0.92
CPSF3-204ENST00000489403 CACNG8Q8WXS5 425 aa9.32□□□□□ -0.92
CPSF3-204ENST00000489403 CCDC140Q96MF4 163 aa9.32□□□□□ -0.92
CPSF3-204ENST00000489403 ATG5Q9H1Y0 275 aa9.32□□□□□ -0.92
CPSF3-204ENST00000489403 OR51E2Q9H255 320 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms