RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 RHEBQ15382 184 aa6.99□□□□□ -1.29
VTI1A-207ENST00000489357 POU2AF1Q16633 256 aa6.99□□□□□ -1.29
VTI1A-207ENST00000489357 VWC2Q2TAL6 325 aa6.99□□□□□ -1.29
VTI1A-207ENST00000489357 SLC25A24Q6NUK1 477 aa6.99□□□□□ -1.29
VTI1A-207ENST00000489357 TMEM182Q6ZP80 229 aaPredicted RBP6.99□□□□□ -1.29
VTI1A-207ENST00000489357 C5orf24Q7Z6I8 188 aa6.99□□□□□ -1.29
VTI1A-207ENST00000489357 ZNF429Q86V71 674 aa6.99□□□□□ -1.29
VTI1A-207ENST00000489357 LILRB2Q8N423 598 aa6.99□□□□□ -1.29
VTI1A-207ENST00000489357 ZNF525Q8N782 197 aa6.99□□□□□ -1.29
VTI1A-207ENST00000489357 C8orf31Q8N9H6 132 aa6.99□□□□□ -1.29
VTI1A-207ENST00000489357 OR4S2Q8NH73 311 aa6.99□□□□□ -1.29
VTI1A-207ENST00000489357 FAM213BQ8TBF2 198 aa6.99□□□□□ -1.29
VTI1A-207ENST00000489357 MBD3L1Q8WWY6 194 aa6.99□□□□□ -1.29
VTI1A-207ENST00000489357 RNASE6Q93091 150 aaKnown RBP6.99□□□□□ -1.29
VTI1A-207ENST00000489357 BSCL2Q96G97 398 aaPredicted RBP6.99□□□□□ -1.29
VTI1A-207ENST00000489357 CLCC1Q96S66 551 aa6.99□□□□□ -1.29
VTI1A-207ENST00000489357 GPHA2Q96T91 129 aa6.99□□□□□ -1.29
VTI1A-207ENST00000489357 TMEM147Q9BVK8 224 aa6.99□□□□□ -1.29
VTI1A-207ENST00000489357 WDR61Q9GZS3 305 aaKnown RBP6.99□□□□□ -1.29
VTI1A-207ENST00000489357 PARP12Q9H0J9 701 aaKnown RBP6.99□□□□□ -1.29
VTI1A-207ENST00000489357 SH3BGRL3Q9H299 93 aa6.99□□□□□ -1.29
VTI1A-207ENST00000489357 GAL3ST2Q9H3Q3 398 aa6.99□□□□□ -1.29
VTI1A-207ENST00000489357 ESRP2Q9H6T0 727 aaKnown RBP6.99□□□□□ -1.29
VTI1A-207ENST00000489357 GFOD1Q9NXC2 390 aa6.99□□□□□ -1.29
VTI1A-207ENST00000489357 CALYQ9NYX4 217 aa6.99□□□□□ -1.29
VTI1A-207ENST00000489357 PSG11Q9UQ72 335 aa6.99□□□□□ -1.29
VTI1A-207ENST00000489357 LINC00312Q9Y6C7 94 aa6.99□□□□□ -1.29
VTI1A-207ENST00000489357 LOC105371267A0A1B0GV96 52 aa6.98□□□□□ -1.29
VTI1A-207ENST00000489357 H3BS24 57 aa6.98□□□□□ -1.29
VTI1A-207ENST00000489357 TSPAN4O14817 238 aa6.98□□□□□ -1.29
VTI1A-207ENST00000489357 SMAD7O15105 426 aaKnown RBP6.98□□□□□ -1.29
VTI1A-207ENST00000489357 NDUFA2O43678 99 aa6.98□□□□□ -1.29
VTI1A-207ENST00000489357 RAMP3O60896 148 aa6.98□□□□□ -1.29
VTI1A-207ENST00000489357 MPDU1O75352 247 aa6.98□□□□□ -1.29
VTI1A-207ENST00000489357 KRASP01116 189 aa6.98□□□□□ -1.29
VTI1A-207ENST00000489357 NQO2P16083 231 aa6.98□□□□□ -1.29
VTI1A-207ENST00000489357 SPCS3P61009 180 aa6.98□□□□□ -1.29
VTI1A-207ENST00000489357 RPL30P62888 115 aaKnown RBP6.98□□□□□ -1.29
VTI1A-207ENST00000489357 SRSF3P84103 164 aaKnown RBP6.98□□□□□ -1.29
VTI1A-207ENST00000489357 EDDM3AQ14507 147 aa6.98□□□□□ -1.29
VTI1A-207ENST00000489357 EFNB3Q15768 340 aa6.98□□□□□ -1.29
VTI1A-207ENST00000489357 ADIPOQQ15848 244 aa6.98□□□□□ -1.29
VTI1A-207ENST00000489357 GUCA2BQ16661 112 aa6.98□□□□□ -1.29
VTI1A-207ENST00000489357 KHDC3LQ587J8 217 aa6.98□□□□□ -1.29
VTI1A-207ENST00000489357 FAM71F2Q6NXP2 309 aa6.98□□□□□ -1.29
VTI1A-207ENST00000489357 CLEC9AQ6UXN8 241 aa6.98□□□□□ -1.29
VTI1A-207ENST00000489357 TMEM217Q8N7C4 229 aa6.98□□□□□ -1.29
VTI1A-207ENST00000489357 BOLLQ8N9W6 283 aaKnown RBP6.98□□□□□ -1.29
VTI1A-207ENST00000489357 OR10P1Q8NGE3 313 aa6.98□□□□□ -1.29
VTI1A-207ENST00000489357 DTD1Q8TEA8 209 aa6.98□□□□□ -1.29
VTI1A-207ENST00000489357 R3HDM4Q96D70 268 aa6.98□□□□□ -1.29
VTI1A-207ENST00000489357 S1PR3Q99500 378 aa6.98□□□□□ -1.29
VTI1A-207ENST00000489357 P2RX4Q99571 388 aa6.98□□□□□ -1.29
VTI1A-207ENST00000489357 ABHD14AQ9BUJ0 271 aa6.98□□□□□ -1.29
VTI1A-207ENST00000489357 EIF5A2Q9GZV4 153 aaKnown RBP6.98□□□□□ -1.29
VTI1A-207ENST00000489357 IFI27L2Q9H2X8 130 aa6.98□□□□□ -1.29
VTI1A-207ENST00000489357 MS4A5Q9H3V2 200 aa6.98□□□□□ -1.29
VTI1A-207ENST00000489357 RBKSQ9H477 322 aa6.98□□□□□ -1.29
VTI1A-207ENST00000489357 SMCO4Q9NRQ5 59 aa6.98□□□□□ -1.29
VTI1A-207ENST00000489357 KCNIP2Q9NS61 270 aa6.98□□□□□ -1.29
VTI1A-207ENST00000489357 FBXO7Q9Y3I1 522 aa6.98□□□□□ -1.29
VTI1A-207ENST00000489357 IGHV3-64DA0A0J9YX35 117 aa6.97□□□□□ -1.29
VTI1A-207ENST00000489357 RBFOX3A6NFN3 312 aa6.97□□□□□ -1.29
VTI1A-207ENST00000489357 FAM90A27PA6NNH2 459 aa6.97□□□□□ -1.29
VTI1A-207ENST00000489357 C17orf98A8MV24 154 aa6.97□□□□□ -1.29
VTI1A-207ENST00000489357 FNDC10F2Z333 226 aa6.97□□□□□ -1.29
VTI1A-207ENST00000489357 C17orf112F2Z3M2 114 aa6.97□□□□□ -1.29
VTI1A-207ENST00000489357 H7C2Y5 167 aa6.97□□□□□ -1.29
VTI1A-207ENST00000489357 S1PR2O95136 353 aa6.97□□□□□ -1.29
VTI1A-207ENST00000489357 IFNA1P01562 189 aa6.97□□□□□ -1.29
VTI1A-207ENST00000489357 OR4A8P0C604 315 aa6.97□□□□□ -1.29
VTI1A-207ENST00000489357 FBN2P35556 2912 aa6.97□□□□□ -1.29
VTI1A-207ENST00000489357 G6PCP35575 357 aa6.97□□□□□ -1.29
VTI1A-207ENST00000489357 EDDM3BP56851 147 aa6.97□□□□□ -1.29
VTI1A-207ENST00000489357 BRWD1-AS2P59051 145 aa6.97□□□□□ -1.29
VTI1A-207ENST00000489357 FLI1Q01543 452 aaPredicted RBP6.97□□□□□ -1.29
VTI1A-207ENST00000489357 AKR1C1Q04828 323 aa6.97□□□□□ -1.29
VTI1A-207ENST00000489357 SLC38A11Q08AI6 406 aa6.97□□□□□ -1.29
VTI1A-207ENST00000489357 C17orf58Q2M2W7 97 aa6.97□□□□□ -1.29
VTI1A-207ENST00000489357 TMEM41BQ5BJD5 291 aa6.97□□□□□ -1.29
VTI1A-207ENST00000489357 ZNF506Q5JVG8 444 aa6.97□□□□□ -1.29
VTI1A-207ENST00000489357 VHLLQ6RSH7 139 aa6.97□□□□□ -1.29
VTI1A-207ENST00000489357 ATRAIDQ6UW56 229 aa6.97□□□□□ -1.29
VTI1A-207ENST00000489357 C15orf54Q8N8G6 183 aa6.97□□□□□ -1.29
VTI1A-207ENST00000489357 ZNRF1Q8ND25 227 aa6.97□□□□□ -1.29
VTI1A-207ENST00000489357 DDB2Q92466 427 aa6.97□□□□□ -1.29
VTI1A-207ENST00000489357 TAF15Q92804 592 aaKnown RBP eCLIP6.97□□□□□ -1.29
VTI1A-207ENST00000489357 C5orf30Q96GV9 206 aa6.97□□□□□ -1.29
VTI1A-207ENST00000489357 GAFA1Q96PS6 74 aa6.97□□□□□ -1.29
VTI1A-207ENST00000489357 MS4A7Q9GZW8 240 aaPredicted RBP6.97□□□□□ -1.29
VTI1A-207ENST00000489357 IDI2-AS1Q9NZ38 188 aa6.97□□□□□ -1.29
VTI1A-207ENST00000489357 KAAG1Q9UBP8 84 aa6.97□□□□□ -1.29
VTI1A-207ENST00000489357 FAM96BQ9Y3D0 163 aa6.97□□□□□ -1.29
VTI1A-207ENST00000489357 HRNRQ86YZ3 2850 aaPredicted RBP6.97□□□□□ -1.29
VTI1A-207ENST00000489357 PDZD2O15018 2839 aa6.96□□□□□ -1.29
VTI1A-207ENST00000489357 TACC2O95359 2948 aa6.96□□□□□ -1.3
VTI1A-207ENST00000489357 RAI1Q7Z5J4 1906 aaPredicted RBP6.96□□□□□ -1.3
VTI1A-207ENST00000489357 DPRXA6NFQ7 191 aa6.96□□□□□ -1.3
VTI1A-207ENST00000489357 LINC00473A8K010 186 aa6.96□□□□□ -1.3
VTI1A-207ENST00000489357 B4DEV8 164 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms