RNA–Protein interactions for RNA: ENST00000489081.5

CMSS1-205, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 2 BASIC

Gene CMSS1, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-205ENST00000489081 PPP1R14BQ96C90 147 aa9.26□□□□□ -0.93
CMSS1-205ENST00000489081 FLYWCH2Q96CP2 140 aaKnown RBP9.26□□□□□ -0.93
CMSS1-205ENST00000489081 RANBP3Q9H6Z4 567 aaPredicted RBP9.26□□□□□ -0.93
CMSS1-205ENST00000489081 SRRM4A7MD48 611 aaKnown RBP9.25□□□□□ -0.93
CMSS1-205ENST00000489081 SHOXO15266 292 aa9.25□□□□□ -0.93
CMSS1-205ENST00000489081 PITX3O75364 302 aa9.25□□□□□ -0.93
CMSS1-205ENST00000489081 HRASP01112 189 aa9.25□□□□□ -0.93
CMSS1-205ENST00000489081 FSHBP01225 129 aa9.25□□□□□ -0.93
CMSS1-205ENST00000489081 RPS16P62249 146 aaKnown RBP9.25□□□□□ -0.93
CMSS1-205ENST00000489081 KRTAP1-1Q07627 177 aa9.25□□□□□ -0.93
CMSS1-205ENST00000489081 SMCO1Q147U7 214 aa9.25□□□□□ -0.93
CMSS1-205ENST00000489081 Q5BKY6 102 aa9.25□□□□□ -0.93
CMSS1-205ENST00000489081 THOC7Q6I9Y2 204 aaKnown RBP9.25□□□□□ -0.93
CMSS1-205ENST00000489081 BRD3OSQ6XYD6 125 aa9.25□□□□□ -0.93
CMSS1-205ENST00000489081 Q6ZRM9 215 aa9.25□□□□□ -0.93
CMSS1-205ENST00000489081 SSX9Q7RTT3 188 aa9.25□□□□□ -0.93
CMSS1-205ENST00000489081 H2BFWTQ7Z2G1 175 aa9.25□□□□□ -0.93
CMSS1-205ENST00000489081 VKORC1L1Q8N0U8 176 aa9.25□□□□□ -0.93
CMSS1-205ENST00000489081 DMBX1Q8NFW5 382 aa9.25□□□□□ -0.93
CMSS1-205ENST00000489081 OR4D5Q8NGN0 318 aa9.25□□□□□ -0.93
CMSS1-205ENST00000489081 PPP1R1CQ8WVI7 109 aa9.25□□□□□ -0.93
CMSS1-205ENST00000489081 RHOVQ96L33 236 aa9.25□□□□□ -0.93
CMSS1-205ENST00000489081 HARBI1Q96MB7 349 aa9.25□□□□□ -0.93
CMSS1-205ENST00000489081 MS4A7Q9GZW8 240 aaPredicted RBP9.25□□□□□ -0.93
CMSS1-205ENST00000489081 GSKIPQ9P0R6 139 aa9.25□□□□□ -0.93
CMSS1-205ENST00000489081 CACNG5Q9UF02 275 aa9.25□□□□□ -0.93
CMSS1-205ENST00000489081 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.25□□□□□ -0.93
CMSS1-205ENST00000489081 CCDC168Q8NDH2 2452 aa9.24□□□□□ -0.93
CMSS1-205ENST00000489081 TRAV14DV4A0A0A6YYC5 116 aa9.24□□□□□ -0.93
CMSS1-205ENST00000489081 FAM90A9PA6NNJ1 464 aa9.24□□□□□ -0.93
CMSS1-205ENST00000489081 BOLA2-SMG1P6H3BVE0 249 aa9.24□□□□□ -0.93
CMSS1-205ENST00000489081 VENTXO95231 258 aa9.24□□□□□ -0.93
CMSS1-205ENST00000489081 IGLV2-23P01705 113 aa9.24□□□□□ -0.93
CMSS1-205ENST00000489081 IL6RP08887 468 aaPredicted RBP9.24□□□□□ -0.93
CMSS1-205ENST00000489081 LGALS7P47929 136 aa9.24□□□□□ -0.93
CMSS1-205ENST00000489081 ARHGDIBP52566 201 aa9.24□□□□□ -0.93
CMSS1-205ENST00000489081 BPIFB3P59826 476 aa9.24□□□□□ -0.93
CMSS1-205ENST00000489081 RITA1Q96K30 269 aa9.24□□□□□ -0.93
CMSS1-205ENST00000489081 AIFM2Q9BRQ8 373 aa9.24□□□□□ -0.93
CMSS1-205ENST00000489081 MEGF9Q9H1U4 602 aa9.24□□□□□ -0.93
CMSS1-205ENST00000489081 TMEM140Q9NV12 185 aa9.24□□□□□ -0.93
CMSS1-205ENST00000489081 COA4Q9NYJ1 87 aa9.24□□□□□ -0.93
CMSS1-205ENST00000489081 VPS13CQ709C8 3753 aa9.24□□□□□ -0.93
CMSS1-205ENST00000489081 A0A0U1RQK1 487 aa9.23□□□□□ -0.93
CMSS1-205ENST00000489081 CD5LO43866 347 aa9.23□□□□□ -0.93
CMSS1-205ENST00000489081 MBPP02686 304 aaPredicted RBP9.23□□□□□ -0.93
CMSS1-205ENST00000489081 C1QBP02746 253 aa9.23□□□□□ -0.93
CMSS1-205ENST00000489081 HNRNPCP07910 306 aaKnown RBP eCLIP9.23□□□□□ -0.93
CMSS1-205ENST00000489081 OR9G9P0C7N8 305 aa9.23□□□□□ -0.93
CMSS1-205ENST00000489081 SAA1P0DJI8 122 aaPredicted RBP9.23□□□□□ -0.93
CMSS1-205ENST00000489081 RAB32Q13637 225 aa9.23□□□□□ -0.93
CMSS1-205ENST00000489081 EBI3Q14213 229 aa9.23□□□□□ -0.93
CMSS1-205ENST00000489081 ZFP69Q49AA0 526 aa9.23□□□□□ -0.93
CMSS1-205ENST00000489081 LRRC37A5PQ49AS3 106 aa9.23□□□□□ -0.93
CMSS1-205ENST00000489081 CXorf66Q5JRM2 361 aaPredicted RBP9.23□□□□□ -0.93
CMSS1-205ENST00000489081 OR4A47Q6IF82 309 aa9.23□□□□□ -0.93
CMSS1-205ENST00000489081 PUSL1Q8N0Z8 303 aaKnown RBP9.23□□□□□ -0.93
CMSS1-205ENST00000489081 NANPQ8TBE9 248 aa9.23□□□□□ -0.93
CMSS1-205ENST00000489081 RNF5Q99942 180 aa9.23□□□□□ -0.93
CMSS1-205ENST00000489081 BET1LQ9NYM9 111 aa9.23□□□□□ -0.93
CMSS1-205ENST00000489081 NUP50Q9UKX7 468 aa9.23□□□□□ -0.93
CMSS1-205ENST00000489081 SOX21Q9Y651 276 aaPredicted RBP9.23□□□□□ -0.93
CMSS1-205ENST00000489081 CREBBPQ92793 2442 aa9.23□□□□□ -0.93
CMSS1-205ENST00000489081 ITPR2Q14571 2701 aa9.23□□□□□ -0.93
CMSS1-205ENST00000489081 CSMD1Q96PZ7 3565 aa9.23□□□□□ -0.93
CMSS1-205ENST00000489081 TRAV3A0A0B4J244 114 aa9.22□□□□□ -0.93
CMSS1-205ENST00000489081 H0YIZ8 118 aa9.22□□□□□ -0.93
CMSS1-205ENST00000489081 MPC2O95563 127 aa9.22□□□□□ -0.93
CMSS1-205ENST00000489081 SCGB1D2O95969 90 aa9.22□□□□□ -0.93
CMSS1-205ENST00000489081 MOSP00540 346 aa9.22□□□□□ -0.93
CMSS1-205ENST00000489081 IGKV1D-33P01593 117 aa9.22□□□□□ -0.93
CMSS1-205ENST00000489081 IGKV1-33P01594 117 aa9.22□□□□□ -0.93
CMSS1-205ENST00000489081 SNRNP70P08621 437 aaKnown RBP9.22□□□□□ -0.93
CMSS1-205ENST00000489081 CD24P25063 80 aa9.22□□□□□ -0.93
CMSS1-205ENST00000489081 PSMB6P28072 239 aa9.22□□□□□ -0.93
CMSS1-205ENST00000489081 BRS3P32247 399 aa9.22□□□□□ -0.93
CMSS1-205ENST00000489081 NKX2-1P43699 371 aaPredicted RBP9.22□□□□□ -0.93
CMSS1-205ENST00000489081 UBE2KP61086 200 aa9.22□□□□□ -0.93
CMSS1-205ENST00000489081 RELBQ01201 579 aa9.22□□□□□ -0.93
CMSS1-205ENST00000489081 ID3Q02535 119 aa9.22□□□□□ -0.93
CMSS1-205ENST00000489081 FGL1Q08830 312 aa9.22□□□□□ -0.93
CMSS1-205ENST00000489081 VMA21Q3ZAQ7 101 aa9.22□□□□□ -0.93
CMSS1-205ENST00000489081 AARDQ4LEZ3 155 aa9.22□□□□□ -0.93
CMSS1-205ENST00000489081 FBLN7Q53RD9 439 aa9.22□□□□□ -0.93
CMSS1-205ENST00000489081 THNSL2Q86YJ6 484 aa9.22□□□□□ -0.93
CMSS1-205ENST00000489081 FOXRED2Q8IWF2 684 aa9.22□□□□□ -0.93
CMSS1-205ENST00000489081 OR11H4Q8NGC9 324 aa9.22□□□□□ -0.93
CMSS1-205ENST00000489081 OR2T10Q8NGZ9 312 aa9.22□□□□□ -0.93
CMSS1-205ENST00000489081 OR1S1Q8NH92 325 aa9.22□□□□□ -0.93
CMSS1-205ENST00000489081 EAF1Q96JC9 268 aaPredicted RBP9.22□□□□□ -0.93
CMSS1-205ENST00000489081 TSNAXQ99598 290 aaKnown RBP9.22□□□□□ -0.93
CMSS1-205ENST00000489081 RNF126Q9BV68 326 aa9.22□□□□□ -0.93
CMSS1-205ENST00000489081 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.22□□□□□ -0.93
CMSS1-205ENST00000489081 NSG2Q9Y328 171 aa9.22□□□□□ -0.93
CMSS1-205ENST00000489081 POMT1Q9Y6A1 747 aa9.22□□□□□ -0.93
CMSS1-205ENST00000489081 K7EPK0 472 aa9.21□□□□□ -0.94
CMSS1-205ENST00000489081 UPK2O00526 184 aa9.21□□□□□ -0.94
CMSS1-205ENST00000489081 SLC25A17O43808 307 aa9.21□□□□□ -0.94
CMSS1-205ENST00000489081 SNAPC5O75971 98 aa9.21□□□□□ -0.94
CMSS1-205ENST00000489081 SPDEFO95238 335 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms