RNA–Protein interactions for RNA: ENST00000488912.5

COL21A1-211, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 2,327 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-211ENST00000488912 TRAV14DV4A0A0A6YYC5 116 aa8.91□□□□□ -0.98
COL21A1-211ENST00000488912 IGHV2-26A0A0B4J1V2 119 aa8.91□□□□□ -0.98
COL21A1-211ENST00000488912 hCG_1809904A0A1W2PP81 198 aa8.91□□□□□ -0.98
COL21A1-211ENST00000488912 A0A1W2PPE2 198 aa8.91□□□□□ -0.98
COL21A1-211ENST00000488912 A0A1W2PR64 198 aa8.91□□□□□ -0.98
COL21A1-211ENST00000488912 A0A1W2PRV1 198 aa8.91□□□□□ -0.98
COL21A1-211ENST00000488912 COLCA2A8K830 154 aa8.91□□□□□ -0.98
COL21A1-211ENST00000488912 ADCYAP1P18509 176 aa8.91□□□□□ -0.98
COL21A1-211ENST00000488912 PAX2Q02962 417 aa8.91□□□□□ -0.98
COL21A1-211ENST00000488912 SMCO1Q147U7 214 aa8.91□□□□□ -0.98
COL21A1-211ENST00000488912 IAH1Q2TAA2 248 aaPredicted RBP8.91□□□□□ -0.98
COL21A1-211ENST00000488912 ZFP82Q8N141 532 aa8.91□□□□□ -0.98
COL21A1-211ENST00000488912 C8orf31Q8N9H6 132 aa8.91□□□□□ -0.98
COL21A1-211ENST00000488912 OR10X1Q8NGY0 326 aa8.91□□□□□ -0.98
COL21A1-211ENST00000488912 OR9G1Q8NH87 305 aa8.91□□□□□ -0.98
COL21A1-211ENST00000488912 ZNF596Q8TC21 504 aa8.91□□□□□ -0.98
COL21A1-211ENST00000488912 IL22RA2Q969J5 263 aa8.91□□□□□ -0.98
COL21A1-211ENST00000488912 C2orf50Q96LR7 162 aa8.91□□□□□ -0.98
COL21A1-211ENST00000488912 PFDN5Q99471 154 aa8.91□□□□□ -0.98
COL21A1-211ENST00000488912 NMES1Q9C002 83 aa8.91□□□□□ -0.98
COL21A1-211ENST00000488912 SIRT7Q9NRC8 400 aa8.91□□□□□ -0.98
COL21A1-211ENST00000488912 TMED3Q9Y3Q3 217 aa8.91□□□□□ -0.98
COL21A1-211ENST00000488912 A0A1B0GV90 55 aa8.9□□□□□ -0.98
COL21A1-211ENST00000488912 FAM157AC9JC47 383 aa8.9□□□□□ -0.98
COL21A1-211ENST00000488912 ENSAO43768 121 aaKnown RBP8.9□□□□□ -0.98
COL21A1-211ENST00000488912 RAB4BP61018 213 aa8.9□□□□□ -0.98
COL21A1-211ENST00000488912 ZNF816Q0VGE8 651 aaPredicted RBP8.9□□□□□ -0.98
COL21A1-211ENST00000488912 LINC00311Q8N616 119 aa8.9□□□□□ -0.98
COL21A1-211ENST00000488912 MMP26Q9NRE1 261 aa8.9□□□□□ -0.98
COL21A1-211ENST00000488912 GSKIPQ9P0R6 139 aa8.9□□□□□ -0.98
COL21A1-211ENST00000488912 CSMD1Q96PZ7 3565 aa8.89□□□□□ -0.99
COL21A1-211ENST00000488912 DUXBA0A1W2PPF3 345 aa8.89□□□□□ -0.99
COL21A1-211ENST00000488912 M0R1W7 72 aa8.89□□□□□ -0.99
COL21A1-211ENST00000488912 S1PR2O95136 353 aa8.89□□□□□ -0.99
COL21A1-211ENST00000488912 VDAC1P21796 283 aa8.89□□□□□ -0.99
COL21A1-211ENST00000488912 COX7A1P24310 79 aa8.89□□□□□ -0.99
COL21A1-211ENST00000488912 LPAR6P43657 344 aa8.89□□□□□ -0.99
COL21A1-211ENST00000488912 CLEC12BQ2HXU8 276 aa8.89□□□□□ -0.99
COL21A1-211ENST00000488912 NMSQ5H8A3 153 aa8.89□□□□□ -0.99
COL21A1-211ENST00000488912 ZNF833PQ6ZTB9 187 aa8.89□□□□□ -0.99
COL21A1-211ENST00000488912 DDB2Q92466 427 aa8.89□□□□□ -0.99
COL21A1-211ENST00000488912 PHYHIPLQ96FC7 376 aa8.89□□□□□ -0.99
COL21A1-211ENST00000488912 S1PR3Q99500 378 aa8.89□□□□□ -0.99
COL21A1-211ENST00000488912 LPAR2Q9HBW0 351 aa8.89□□□□□ -0.99
COL21A1-211ENST00000488912 SVEP1Q4LDE5 3571 aa8.89□□□□□ -0.99
COL21A1-211ENST00000488912 IGHV2-70DA0A0C4DH43 119 aa8.89□□□□□ -0.99
COL21A1-211ENST00000488912 A0A0G2JRQ6 117 aa8.89□□□□□ -0.99
COL21A1-211ENST00000488912 C1orf196B1AJZ1 125 aa8.89□□□□□ -0.99
COL21A1-211ENST00000488912 FCGR3BO75015 233 aa8.89□□□□□ -0.99
COL21A1-211ENST00000488912 IGKV1-5P01602 117 aa8.89□□□□□ -0.99
COL21A1-211ENST00000488912 DSCR9P59020 149 aa8.89□□□□□ -0.99
COL21A1-211ENST00000488912 CYCSP99999 105 aaKnown RBP8.89□□□□□ -0.99
COL21A1-211ENST00000488912 IL15RAQ13261 267 aa8.89□□□□□ -0.99
COL21A1-211ENST00000488912 DIAPH2-AS1Q14236 149 aa8.89□□□□□ -0.99
COL21A1-211ENST00000488912 SSX9Q7RTT3 188 aa8.89□□□□□ -0.99
COL21A1-211ENST00000488912 ZNF383Q8NA42 475 aa8.89□□□□□ -0.99
COL21A1-211ENST00000488912 NEU1Q99519 415 aa8.89□□□□□ -0.99
COL21A1-211ENST00000488912 CLEC7AQ9BXN2 247 aa8.89□□□□□ -0.99
COL21A1-211ENST00000488912 TMPRSS5Q9H3S3 457 aa8.89□□□□□ -0.99
COL21A1-211ENST00000488912 COMMD9Q9P000 198 aa8.89□□□□□ -0.99
COL21A1-211ENST00000488912 NUDT19A8MXV4 375 aa8.88□□□□□ -0.99
COL21A1-211ENST00000488912 FOXH1O75593 365 aa8.88□□□□□ -0.99
COL21A1-211ENST00000488912 IGLV1-47P01700 117 aa8.88□□□□□ -0.99
COL21A1-211ENST00000488912 REG1BP48304 166 aa8.88□□□□□ -0.99
COL21A1-211ENST00000488912 AKR1C2P52895 323 aa8.88□□□□□ -0.99
COL21A1-211ENST00000488912 IZUMO4Q1ZYL8 232 aa8.88□□□□□ -0.99
COL21A1-211ENST00000488912 HLA-DRB5Q30154 266 aa8.88□□□□□ -0.99
COL21A1-211ENST00000488912 DEFB113Q30KQ7 82 aa8.88□□□□□ -0.99
COL21A1-211ENST00000488912 PNKDQ8N490 385 aa8.88□□□□□ -0.99
COL21A1-211ENST00000488912 KIR3DL3Q8N743 410 aa8.88□□□□□ -0.99
COL21A1-211ENST00000488912 TCTEX1D1Q8N7M0 179 aa8.88□□□□□ -0.99
COL21A1-211ENST00000488912 ST6GALNAC6Q969X2 333 aa8.88□□□□□ -0.99
COL21A1-211ENST00000488912 RBMXL1Q96E39 390 aaKnown RBP8.88□□□□□ -0.99
COL21A1-211ENST00000488912 C14orf144Q96I85 54 aa8.88□□□□□ -0.99
COL21A1-211ENST00000488912 BEX4Q9NWD9 120 aaPredicted RBP8.88□□□□□ -0.99
COL21A1-211ENST00000488912 A0A0D9SG52 128 aa8.88□□□□□ -0.99
COL21A1-211ENST00000488912 CT45A6P0DMU7 189 aa8.88□□□□□ -0.99
COL21A1-211ENST00000488912 CT45A5P0DMU8 189 aa8.88□□□□□ -0.99
COL21A1-211ENST00000488912 CT45A7P0DMV0 189 aa8.88□□□□□ -0.99
COL21A1-211ENST00000488912 EPHA1P21709 976 aa8.88□□□□□ -0.99
COL21A1-211ENST00000488912 PSMB6P28072 239 aa8.88□□□□□ -0.99
COL21A1-211ENST00000488912 THBS3P49746 956 aa8.88□□□□□ -0.99
COL21A1-211ENST00000488912 ZNF137PP52743 207 aa8.88□□□□□ -0.99
COL21A1-211ENST00000488912 KLRD1Q13241 179 aa8.88□□□□□ -0.99
COL21A1-211ENST00000488912 RAB32Q13637 225 aa8.88□□□□□ -0.99
COL21A1-211ENST00000488912 PEA15Q15121 130 aa8.88□□□□□ -0.99
COL21A1-211ENST00000488912 C9orf152Q5JTZ5 239 aa8.88□□□□□ -0.99
COL21A1-211ENST00000488912 KCNRGQ8N5I3 272 aa8.88□□□□□ -0.99
COL21A1-211ENST00000488912 C15orf54Q8N8G6 183 aa8.88□□□□□ -0.99
COL21A1-211ENST00000488912 RNASE11Q8TAA1 199 aaKnown RBP8.88□□□□□ -0.99
COL21A1-211ENST00000488912 TNFRSF14Q92956 283 aa8.88□□□□□ -0.99
COL21A1-211ENST00000488912 SEC11CQ9BY50 192 aa8.88□□□□□ -0.99
COL21A1-211ENST00000488912 MRPL20Q9BYC9 149 aaKnown RBP8.88□□□□□ -0.99
COL21A1-211ENST00000488912 FAM212BQ9NTI7 297 aaPredicted RBP8.88□□□□□ -0.99
COL21A1-211ENST00000488912 KRASP01116 189 aa8.87□□□□□ -0.99
COL21A1-211ENST00000488912 PRTN3P24158 256 aa8.87□□□□□ -0.99
COL21A1-211ENST00000488912 G6PCP35575 357 aa8.87□□□□□ -0.99
COL21A1-211ENST00000488912 NPBWR1P48145 328 aa8.87□□□□□ -0.99
COL21A1-211ENST00000488912 LBHQ53QV2 105 aaPredicted RBP8.87□□□□□ -0.99
COL21A1-211ENST00000488912 C11orf87Q6NUJ2 197 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms