RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 KRTAP10-11P60412 298 aa11.02□□□□□ -0.65
COL9A2-208ENST00000488463 FXYD3Q14802 87 aa11.02□□□□□ -0.65
COL9A2-208ENST00000488463 CDK10Q15131 360 aa11.02□□□□□ -0.65
COL9A2-208ENST00000488463 DHRS11Q6UWP2 260 aa11.02□□□□□ -0.65
COL9A2-208ENST00000488463 KCTD9Q7L273 389 aa11.02□□□□□ -0.65
COL9A2-208ENST00000488463 MFSD4AQ8N468 514 aa11.02□□□□□ -0.65
COL9A2-208ENST00000488463 TEX45Q8NA69 505 aa11.02□□□□□ -0.65
COL9A2-208ENST00000488463 OSR1Q8TAX0 266 aaPredicted RBP11.02□□□□□ -0.65
COL9A2-208ENST00000488463 HSD17B10Q99714 261 aaKnown RBP11.02□□□□□ -0.65
COL9A2-208ENST00000488463 CCL28Q9NRJ3 127 aa11.02□□□□□ -0.65
COL9A2-208ENST00000488463 FCGR3BO75015 233 aa11.01□□□□□ -0.65
COL9A2-208ENST00000488463 SAA1P0DJI8 122 aaPredicted RBP11.01□□□□□ -0.65
COL9A2-208ENST00000488463 PRSS3P35030 304 aa11.01□□□□□ -0.65
COL9A2-208ENST00000488463 GNB1P62873 340 aa11.01□□□□□ -0.65
COL9A2-208ENST00000488463 EGFEM1PQ0D2K5 195 aa11.01□□□□□ -0.65
COL9A2-208ENST00000488463 TMEM267Q0VDI3 215 aaPredicted RBP11.01□□□□□ -0.65
COL9A2-208ENST00000488463 DYRK1AQ13627 763 aa11.01□□□□□ -0.65
COL9A2-208ENST00000488463 PRSS8Q16651 343 aa11.01□□□□□ -0.65
COL9A2-208ENST00000488463 ACTBL2Q562R1 376 aa11.01□□□□□ -0.65
COL9A2-208ENST00000488463 UNQ5815/PRO19632Q6UWF5 114 aa11.01□□□□□ -0.65
COL9A2-208ENST00000488463 ZNF66Q6ZN08 573 aa11.01□□□□□ -0.65
COL9A2-208ENST00000488463 IDO2Q6ZQW0 420 aa11.01□□□□□ -0.65
COL9A2-208ENST00000488463 SECTM1Q8WVN6 248 aa11.01□□□□□ -0.65
COL9A2-208ENST00000488463 SLIRPQ9GZT3 109 aaKnown RBP11.01□□□□□ -0.65
COL9A2-208ENST00000488463 TAS2R8Q9NYW2 309 aa11.01□□□□□ -0.65
COL9A2-208ENST00000488463 VSIG4Q9Y279 399 aa11.01□□□□□ -0.65
COL9A2-208ENST00000488463 DUS4LO95620 317 aaKnown RBP11□□□□□ -0.65
COL9A2-208ENST00000488463 CBX3Q13185 183 aa11□□□□□ -0.65
COL9A2-208ENST00000488463 OR2B11Q5JQS5 317 aa11□□□□□ -0.65
COL9A2-208ENST00000488463 SPANXN2Q5MJ10 180 aa11□□□□□ -0.65
COL9A2-208ENST00000488463 TMEM65Q6PI78 240 aa11□□□□□ -0.65
COL9A2-208ENST00000488463 ZNF818PQ6ZRF7 136 aa11□□□□□ -0.65
COL9A2-208ENST00000488463 LINC00299Q6ZSB3 139 aa11□□□□□ -0.65
COL9A2-208ENST00000488463 OR5M8Q8NGP6 311 aa11□□□□□ -0.65
COL9A2-208ENST00000488463 GRPEL2Q8TAA5 225 aa11□□□□□ -0.65
COL9A2-208ENST00000488463 DIRAS2Q96HU8 199 aa11□□□□□ -0.65
COL9A2-208ENST00000488463 NXF2Q9GZY0 626 aaKnown RBP11□□□□□ -0.65
COL9A2-208ENST00000488463 MIXL1Q9H2W2 232 aa11□□□□□ -0.65
COL9A2-208ENST00000488463 ZNF430Q9H8G1 570 aaPredicted RBP11□□□□□ -0.65
COL9A2-208ENST00000488463 IFT46Q9NQC8 304 aa11□□□□□ -0.65
COL9A2-208ENST00000488463 AURKAIP1Q9NWT8 199 aaPredicted RBP11□□□□□ -0.65
COL9A2-208ENST00000488463 RAMP3O60896 148 aa10.99□□□□□ -0.65
COL9A2-208ENST00000488463 BRI3O95415 125 aa10.99□□□□□ -0.65
COL9A2-208ENST00000488463 GNRHRP30968 328 aa10.99□□□□□ -0.65
COL9A2-208ENST00000488463 VMA21Q3ZAQ7 101 aa10.99□□□□□ -0.65
COL9A2-208ENST00000488463 PYHIN1Q6K0P9 492 aa10.99□□□□□ -0.65
COL9A2-208ENST00000488463 VKORC1L1Q8N0U8 176 aa10.99□□□□□ -0.65
COL9A2-208ENST00000488463 PUSL1Q8N0Z8 303 aaKnown RBP10.99□□□□□ -0.65
COL9A2-208ENST00000488463 ZBTB34Q8NCN2 500 aa10.99□□□□□ -0.65
COL9A2-208ENST00000488463 OR11H1Q8NG94 326 aa10.99□□□□□ -0.65
COL9A2-208ENST00000488463 ABHD5Q8WTS1 349 aa10.99□□□□□ -0.65
COL9A2-208ENST00000488463 TCTEX1D2Q8WW35 142 aa10.99□□□□□ -0.65
COL9A2-208ENST00000488463 RHOVQ96L33 236 aa10.99□□□□□ -0.65
COL9A2-208ENST00000488463 OR5B12Q96R08 314 aa10.99□□□□□ -0.65
COL9A2-208ENST00000488463 SLC5A7Q9GZV3 580 aa10.99□□□□□ -0.65
COL9A2-208ENST00000488463 ALX4Q9H161 411 aaPredicted RBP10.99□□□□□ -0.65
COL9A2-208ENST00000488463 SCPEP1Q9HB40 452 aa10.99□□□□□ -0.65
COL9A2-208ENST00000488463 EHFQ9NZC4 300 aa10.99□□□□□ -0.65
COL9A2-208ENST00000488463 MRPS7Q9Y2R9 242 aaKnown RBP10.99□□□□□ -0.65
COL9A2-208ENST00000488463 PRELID3BQ9Y3B1 194 aa10.99□□□□□ -0.65
COL9A2-208ENST00000488463 SORL1Q92673 2214 aa10.99□□□□□ -0.65
COL9A2-208ENST00000488463 CTDSP2O14595 271 aa10.98□□□□□ -0.65
COL9A2-208ENST00000488463 RBFOX2O43251 390 aaKnown RBP eCLIP10.98□□□□□ -0.65
COL9A2-208ENST00000488463 TNFSF12O43508 249 aa10.98□□□□□ -0.65
COL9A2-208ENST00000488463 RBMXL2O75526 392 aaKnown RBP10.98□□□□□ -0.65
COL9A2-208ENST00000488463 TPPPO94811 219 aa10.98□□□□□ -0.65
COL9A2-208ENST00000488463 CNIH1O95406 144 aa10.98□□□□□ -0.65
COL9A2-208ENST00000488463 PMP2P02689 132 aa10.98□□□□□ -0.65
COL9A2-208ENST00000488463 HOXD3P31249 432 aaPredicted RBP10.98□□□□□ -0.65
COL9A2-208ENST00000488463 FXYD4P59646 89 aa10.98□□□□□ -0.65
COL9A2-208ENST00000488463 REC114Q7Z4M0 266 aa10.98□□□□□ -0.65
COL9A2-208ENST00000488463 SNX29P2Q8IUI4 249 aa10.98□□□□□ -0.65
COL9A2-208ENST00000488463 POC5Q8NA72 575 aa10.98□□□□□ -0.65
COL9A2-208ENST00000488463 OR1N2Q8NGR9 330 aa10.98□□□□□ -0.65
COL9A2-208ENST00000488463 OR4S2Q8NH73 311 aa10.98□□□□□ -0.65
COL9A2-208ENST00000488463 S100ZQ8WXG8 99 aa10.98□□□□□ -0.65
COL9A2-208ENST00000488463 MOB3AQ96BX8 217 aa10.98□□□□□ -0.65
COL9A2-208ENST00000488463 MS4A10Q96PG2 267 aa10.98□□□□□ -0.65
COL9A2-208ENST00000488463 FXYD6Q9H0Q3 95 aa10.98□□□□□ -0.65
COL9A2-208ENST00000488463 STAB2Q8WWQ8 2551 aa10.97□□□□□ -0.65
COL9A2-208ENST00000488463 A0A1B0GW64 132 aa10.97□□□□□ -0.65
COL9A2-208ENST00000488463 FABP12A6NFH5 140 aa10.97□□□□□ -0.65
COL9A2-208ENST00000488463 MSGN1A6NI15 193 aa10.97□□□□□ -0.65
COL9A2-208ENST00000488463 SULT1C2O00338 296 aa10.97□□□□□ -0.65
COL9A2-208ENST00000488463 IL6RP08887 468 aaPredicted RBP10.97□□□□□ -0.65
COL9A2-208ENST00000488463 LGALS1P09382 135 aaKnown RBP10.97□□□□□ -0.65
COL9A2-208ENST00000488463 HLA-DMAP28067 261 aa10.97□□□□□ -0.65
COL9A2-208ENST00000488463 HRH1P35367 487 aa10.97□□□□□ -0.65
COL9A2-208ENST00000488463 TAS2R46P59540 309 aa10.97□□□□□ -0.65
COL9A2-208ENST00000488463 C10orf55Q5SWW7 151 aa10.97□□□□□ -0.65
COL9A2-208ENST00000488463 TMEM17Q86X19 198 aa10.97□□□□□ -0.65
COL9A2-208ENST00000488463 OR5T1Q8NG75 326 aa10.97□□□□□ -0.65
COL9A2-208ENST00000488463 OR6Q1Q8NGQ2 317 aa10.97□□□□□ -0.65
COL9A2-208ENST00000488463 TMEM167AQ8TBQ9 72 aa10.97□□□□□ -0.65
COL9A2-208ENST00000488463 SRSF12Q8WXF0 261 aaKnown RBP10.97□□□□□ -0.65
COL9A2-208ENST00000488463 TMEM68Q96MH6 324 aa10.97□□□□□ -0.65
COL9A2-208ENST00000488463 ABHD1Q96SE0 405 aa10.97□□□□□ -0.65
COL9A2-208ENST00000488463 ZNF2Q9BSG1 426 aaPredicted RBP10.97□□□□□ -0.65
COL9A2-208ENST00000488463 SLA2Q9H6Q3 261 aa10.97□□□□□ -0.65
COL9A2-208ENST00000488463 EXTL2Q9UBQ6 330 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms