RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 TNFRSF14Q92956 283 aa10.38□□□□□ -0.75
NELFE-209ENST00000488426 SSBP3Q9BWW4 388 aaPredicted RBP10.38□□□□□ -0.75
NELFE-209ENST00000488426 REG4Q9BYZ8 158 aa10.38□□□□□ -0.75
NELFE-209ENST00000488426 TMEM133Q9H2Q1 129 aa10.38□□□□□ -0.75
NELFE-209ENST00000488426 CACNG5Q9UF02 275 aa10.38□□□□□ -0.75
NELFE-209ENST00000488426 MSGN1A6NI15 193 aa10.37□□□□□ -0.75
NELFE-209ENST00000488426 J3QR06 171 aa10.37□□□□□ -0.75
NELFE-209ENST00000488426 FCGR3BO75015 233 aa10.37□□□□□ -0.75
NELFE-209ENST00000488426 KRASP01116 189 aa10.37□□□□□ -0.75
NELFE-209ENST00000488426 HKR1P10072 659 aa10.37□□□□□ -0.75
NELFE-209ENST00000488426 RPL12P30050 165 aaKnown RBP10.37□□□□□ -0.75
NELFE-209ENST00000488426 ERVFRD-1P60508 538 aa10.37□□□□□ -0.75
NELFE-209ENST00000488426 UBA52P62987 128 aaKnown RBP10.37□□□□□ -0.75
NELFE-209ENST00000488426 CXorf66Q5JRM2 361 aaPredicted RBP10.37□□□□□ -0.75
NELFE-209ENST00000488426 GPR157Q5UAW9 335 aa10.37□□□□□ -0.75
NELFE-209ENST00000488426 DMBX1Q8NFW5 382 aa10.37□□□□□ -0.75
NELFE-209ENST00000488426 OR4S2Q8NH73 311 aa10.37□□□□□ -0.75
NELFE-209ENST00000488426 C11orf1Q9H5F2 150 aa10.37□□□□□ -0.75
NELFE-209ENST00000488426 PCP4L1A6NKN8 68 aa10.36□□□□□ -0.75
NELFE-209ENST00000488426 INAFM1C9JVW0 142 aa10.36□□□□□ -0.75
NELFE-209ENST00000488426 FAM90A26D6RGX4 464 aa10.36□□□□□ -0.75
NELFE-209ENST00000488426 WRBO00258 174 aa10.36□□□□□ -0.75
NELFE-209ENST00000488426 G6PCP35575 357 aa10.36□□□□□ -0.75
NELFE-209ENST00000488426 ARHGDIBP52566 201 aa10.36□□□□□ -0.75
NELFE-209ENST00000488426 ZNF137PP52743 207 aa10.36□□□□□ -0.75
NELFE-209ENST00000488426 LINC00205P59089 165 aa10.36□□□□□ -0.75
NELFE-209ENST00000488426 Q6ZRM9 215 aa10.36□□□□□ -0.75
NELFE-209ENST00000488426 C1orf229Q6ZS94 237 aaPredicted RBP10.36□□□□□ -0.75
NELFE-209ENST00000488426 ZNF525Q8N782 197 aa10.36□□□□□ -0.75
NELFE-209ENST00000488426 OR10X1Q8NGY0 326 aa10.36□□□□□ -0.75
NELFE-209ENST00000488426 TMEM186Q96B77 213 aa10.36□□□□□ -0.75
NELFE-209ENST00000488426 R3HDM4Q96D70 268 aa10.36□□□□□ -0.75
NELFE-209ENST00000488426 MALRD1Q5VYJ5 2156 aa10.36□□□□□ -0.75
NELFE-209ENST00000488426 LOC105371242A0A075B767 164 aa10.36□□□□□ -0.75
NELFE-209ENST00000488426 A0A096LNT2 108 aa10.36□□□□□ -0.75
NELFE-209ENST00000488426 MARCH11A6NNE9 402 aa10.36□□□□□ -0.75
NELFE-209ENST00000488426 FAM90A9PA6NNJ1 464 aa10.36□□□□□ -0.75
NELFE-209ENST00000488426 KIAA1324LA8MWY0 1029 aaPredicted RBP10.36□□□□□ -0.75
NELFE-209ENST00000488426 C22orf46C9J442 243 aa10.36□□□□□ -0.75
NELFE-209ENST00000488426 TAAR5O14804 337 aa10.36□□□□□ -0.75
NELFE-209ENST00000488426 KCNAB3O43448 404 aa10.36□□□□□ -0.75
NELFE-209ENST00000488426 GPR137BO60478 399 aa10.36□□□□□ -0.75
NELFE-209ENST00000488426 S100A6P06703 90 aa10.36□□□□□ -0.75
NELFE-209ENST00000488426 BTF3P20290 206 aaKnown RBP10.36□□□□□ -0.75
NELFE-209ENST00000488426 IL3RAP26951 378 aa10.36□□□□□ -0.75
NELFE-209ENST00000488426 PDLIM4P50479 330 aa10.36□□□□□ -0.75
NELFE-209ENST00000488426 EXOSC2Q13868 293 aaKnown RBP10.36□□□□□ -0.75
NELFE-209ENST00000488426 H2BFWTQ7Z2G1 175 aa10.36□□□□□ -0.75
NELFE-209ENST00000488426 ABHD12Q8N2K0 398 aa10.36□□□□□ -0.75
NELFE-209ENST00000488426 ZNF383Q8NA42 475 aa10.36□□□□□ -0.75
NELFE-209ENST00000488426 ZC4H2Q9NQZ6 224 aa10.36□□□□□ -0.75
NELFE-209ENST00000488426 UBQLN2Q9UHD9 624 aa10.36□□□□□ -0.75
NELFE-209ENST00000488426 ZNF98A6NK75 572 aa10.35□□□□□ -0.75
NELFE-209ENST00000488426 M0R1W7 72 aa10.35□□□□□ -0.75
NELFE-209ENST00000488426 SSSCA1O60232 199 aa10.35□□□□□ -0.75
NELFE-209ENST00000488426 CFDP00746 253 aaPredicted RBP10.35□□□□□ -0.75
NELFE-209ENST00000488426 IGHV2-5P01817 119 aa10.35□□□□□ -0.75
NELFE-209ENST00000488426 ERVK-16P61578 105 aa10.35□□□□□ -0.75
NELFE-209ENST00000488426 VAMP2P63027 116 aa10.35□□□□□ -0.75
NELFE-209ENST00000488426 IZUMO4Q1ZYL8 232 aa10.35□□□□□ -0.75
NELFE-209ENST00000488426 MIDNQ504T8 468 aa10.35□□□□□ -0.75
NELFE-209ENST00000488426 DHRS7BQ6IAN0 325 aaPredicted RBP10.35□□□□□ -0.75
NELFE-209ENST00000488426 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.35□□□□□ -0.75
NELFE-209ENST00000488426 RAB40CQ96S21 281 aa10.35□□□□□ -0.75
NELFE-209ENST00000488426 ZNF471Q9BX82 626 aaPredicted RBP10.35□□□□□ -0.75
NELFE-209ENST00000488426 BARX1Q9HBU1 254 aaPredicted RBP10.35□□□□□ -0.75
NELFE-209ENST00000488426 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.35□□□□□ -0.75
NELFE-209ENST00000488426 IGHV2-26A0A0B4J1V2 119 aa10.34□□□□□ -0.75
NELFE-209ENST00000488426 I3L521 148 aa10.34□□□□□ -0.75
NELFE-209ENST00000488426 CT45A6P0DMU7 189 aa10.34□□□□□ -0.75
NELFE-209ENST00000488426 CT45A5P0DMU8 189 aa10.34□□□□□ -0.75
NELFE-209ENST00000488426 CT45A7P0DMV0 189 aa10.34□□□□□ -0.75
NELFE-209ENST00000488426 RRASP10301 218 aa10.34□□□□□ -0.75
NELFE-209ENST00000488426 NQO2P16083 231 aa10.34□□□□□ -0.75
NELFE-209ENST00000488426 PRRX1P54821 245 aa10.34□□□□□ -0.75
NELFE-209ENST00000488426 AANATQ16613 207 aa10.34□□□□□ -0.75
NELFE-209ENST00000488426 RTL8BQ17RB0 113 aa10.34□□□□□ -0.75
NELFE-209ENST00000488426 PRIMA1Q86XR5 153 aa10.34□□□□□ -0.75
NELFE-209ENST00000488426 OR2C3Q8N628 320 aa10.34□□□□□ -0.75
NELFE-209ENST00000488426 STOML3Q8TAV4 291 aa10.34□□□□□ -0.75
NELFE-209ENST00000488426 ST8SIA2Q92186 375 aa10.34□□□□□ -0.75
NELFE-209ENST00000488426 ST6GALNAC6Q969X2 333 aa10.34□□□□□ -0.75
NELFE-209ENST00000488426 CLEC7AQ9BXN2 247 aa10.34□□□□□ -0.75
NELFE-209ENST00000488426 MAGT1Q9H0U3 335 aa10.34□□□□□ -0.75
NELFE-209ENST00000488426 ZNRD1Q9P1U0 126 aa10.34□□□□□ -0.75
NELFE-209ENST00000488426 FBN1P35555 2871 aaKnown RBP10.34□□□□□ -0.75
NELFE-209ENST00000488426 TSPAN4O14817 238 aa10.34□□□□□ -0.75
NELFE-209ENST00000488426 SYNGR2O43760 224 aa10.34□□□□□ -0.75
NELFE-209ENST00000488426 MED6O75586 246 aa10.34□□□□□ -0.75
NELFE-209ENST00000488426 KIR3DL3Q8N743 410 aa10.34□□□□□ -0.75
NELFE-209ENST00000488426 BEND2Q8NDZ0 799 aa10.34□□□□□ -0.75
NELFE-209ENST00000488426 PHYHIPLQ96FC7 376 aa10.34□□□□□ -0.75
NELFE-209ENST00000488426 BPESC1Q9GZL8 116 aa10.34□□□□□ -0.75
NELFE-209ENST00000488426 SLC25A31Q9H0C2 315 aa10.34□□□□□ -0.75
NELFE-209ENST00000488426 SLC35D1Q9NTN3 355 aa10.34□□□□□ -0.75
NELFE-209ENST00000488426 LYRM2Q9NU23 88 aaPredicted RBP10.34□□□□□ -0.75
NELFE-209ENST00000488426 ONECUT1Q9UBC0 465 aa10.34□□□□□ -0.75
NELFE-209ENST00000488426 HSPB7Q9UBY9 170 aa10.34□□□□□ -0.75
NELFE-209ENST00000488426 CACFD1Q9UGQ2 172 aa10.34□□□□□ -0.75
NELFE-209ENST00000488426 A8MXK9 166 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms