RNA–Protein interactions for RNA: ENST00000488325.5

HLA-DOB-209, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,188 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-209ENST00000488325 SHISA2Q6UWI4 295 aa9.78□□□□□ -0.84
HLA-DOB-209ENST00000488325 OR11H4Q8NGC9 324 aa9.78□□□□□ -0.84
HLA-DOB-209ENST00000488325 DDB2Q92466 427 aa9.78□□□□□ -0.84
HLA-DOB-209ENST00000488325 AIFM2Q9BRQ8 373 aa9.78□□□□□ -0.84
HLA-DOB-209ENST00000488325 PCGF1Q9BSM1 259 aa9.78□□□□□ -0.84
HLA-DOB-209ENST00000488325 ZNF747Q9BV97 191 aa9.78□□□□□ -0.84
HLA-DOB-209ENST00000488325 POLR3KQ9Y2Y1 108 aaPredicted RBP9.78□□□□□ -0.84
HLA-DOB-209ENST00000488325 MMP24Q9Y5R2 645 aa9.78□□□□□ -0.84
HLA-DOB-209ENST00000488325 IGHV4-61A0A0C4DH41 118 aa9.77□□□□□ -0.85
HLA-DOB-209ENST00000488325 L7N2F9 121 aa9.77□□□□□ -0.85
HLA-DOB-209ENST00000488325 ST8SIA3O43173 380 aa9.77□□□□□ -0.85
HLA-DOB-209ENST00000488325 RAMP3O60896 148 aa9.77□□□□□ -0.85
HLA-DOB-209ENST00000488325 S1PR2O95136 353 aa9.77□□□□□ -0.85
HLA-DOB-209ENST00000488325 SCGB1D2O95969 90 aa9.77□□□□□ -0.85
HLA-DOB-209ENST00000488325 IGKV1-39P01597 117 aa9.77□□□□□ -0.85
HLA-DOB-209ENST00000488325 IGKV1D-39P04432 117 aa9.77□□□□□ -0.85
HLA-DOB-209ENST00000488325 COX7A1P24310 79 aa9.77□□□□□ -0.85
HLA-DOB-209ENST00000488325 ZFP36P26651 326 aaKnown RBP9.77□□□□□ -0.85
HLA-DOB-209ENST00000488325 ARHGDIBP52566 201 aa9.77□□□□□ -0.85
HLA-DOB-209ENST00000488325 RAB32Q13637 225 aa9.77□□□□□ -0.85
HLA-DOB-209ENST00000488325 H2BFWTQ7Z2G1 175 aa9.77□□□□□ -0.85
HLA-DOB-209ENST00000488325 ZNF546Q86UE3 836 aa9.77□□□□□ -0.85
HLA-DOB-209ENST00000488325 TGIF2LXQ8IUE1 241 aa9.77□□□□□ -0.85
HLA-DOB-209ENST00000488325 PNKDQ8N490 385 aa9.77□□□□□ -0.85
HLA-DOB-209ENST00000488325 C9orf62Q8N4C0 152 aa9.77□□□□□ -0.85
HLA-DOB-209ENST00000488325 Q8N7P7 452 aa9.77□□□□□ -0.85
HLA-DOB-209ENST00000488325 DRAXINQ8NBI3 349 aaPredicted RBP9.77□□□□□ -0.85
HLA-DOB-209ENST00000488325 OR4D5Q8NGN0 318 aa9.77□□□□□ -0.85
HLA-DOB-209ENST00000488325 OR1S1Q8NH92 325 aa9.77□□□□□ -0.85
HLA-DOB-209ENST00000488325 GRPEL2Q8TAA5 225 aa9.77□□□□□ -0.85
HLA-DOB-209ENST00000488325 GPR146Q96CH1 333 aa9.77□□□□□ -0.85
HLA-DOB-209ENST00000488325 UNKLQ9H9P5 680 aaKnown RBP9.77□□□□□ -0.85
HLA-DOB-209ENST00000488325 SLC35D1Q9NTN3 355 aa9.77□□□□□ -0.85
HLA-DOB-209ENST00000488325 MBD2Q9UBB5 411 aa9.77□□□□□ -0.85
HLA-DOB-209ENST00000488325 LSM5Q9Y4Y9 91 aaKnown RBP9.77□□□□□ -0.85
HLA-DOB-209ENST00000488325 HSPB11Q9Y547 144 aa9.77□□□□□ -0.85
HLA-DOB-209ENST00000488325 POMT1Q9Y6A1 747 aa9.77□□□□□ -0.85
HLA-DOB-209ENST00000488325 FAM90A9PA6NNJ1 464 aa9.76□□□□□ -0.85
HLA-DOB-209ENST00000488325 WRBO00258 174 aa9.76□□□□□ -0.85
HLA-DOB-209ENST00000488325 ARPC5O15511 151 aa9.76□□□□□ -0.85
HLA-DOB-209ENST00000488325 OR2F2O95006 317 aa9.76□□□□□ -0.85
HLA-DOB-209ENST00000488325 HRASP01112 189 aa9.76□□□□□ -0.85
HLA-DOB-209ENST00000488325 IGKV1-5P01602 117 aa9.76□□□□□ -0.85
HLA-DOB-209ENST00000488325 IGLV1-47P01700 117 aa9.76□□□□□ -0.85
HLA-DOB-209ENST00000488325 CT45A6P0DMU7 189 aa9.76□□□□□ -0.85
HLA-DOB-209ENST00000488325 CT45A5P0DMU8 189 aa9.76□□□□□ -0.85
HLA-DOB-209ENST00000488325 CT45A7P0DMV0 189 aa9.76□□□□□ -0.85
HLA-DOB-209ENST00000488325 LYL1P12980 280 aa9.76□□□□□ -0.85
HLA-DOB-209ENST00000488325 NQO2P16083 231 aa9.76□□□□□ -0.85
HLA-DOB-209ENST00000488325 PVALBP20472 110 aaPredicted RBP9.76□□□□□ -0.85
HLA-DOB-209ENST00000488325 EPHA1P21709 976 aa9.76□□□□□ -0.85
HLA-DOB-209ENST00000488325 NKX2-1P43699 371 aaPredicted RBP9.76□□□□□ -0.85
HLA-DOB-209ENST00000488325 RAB13P51153 203 aa9.76□□□□□ -0.85
HLA-DOB-209ENST00000488325 DVL1P1P54792 670 aaPredicted RBP9.76□□□□□ -0.85
HLA-DOB-209ENST00000488325 OR2F1Q13607 317 aa9.76□□□□□ -0.85
HLA-DOB-209ENST00000488325 ZNF383Q8NA42 475 aa9.76□□□□□ -0.85
HLA-DOB-209ENST00000488325 INO80EQ8NBZ0 244 aaPredicted RBP9.76□□□□□ -0.85
HLA-DOB-209ENST00000488325 OR11H6Q8NGC7 330 aa9.76□□□□□ -0.85
HLA-DOB-209ENST00000488325 DCUN1D4Q92564 292 aa9.76□□□□□ -0.85
HLA-DOB-209ENST00000488325 R3HDM4Q96D70 268 aa9.76□□□□□ -0.85
HLA-DOB-209ENST00000488325 NABP2Q9BQ15 211 aa9.76□□□□□ -0.85
HLA-DOB-209ENST00000488325 MRPL20Q9BYC9 149 aaKnown RBP9.76□□□□□ -0.85
HLA-DOB-209ENST00000488325 MFFQ9GZY8 342 aa9.76□□□□□ -0.85
HLA-DOB-209ENST00000488325 COA4Q9NYJ1 87 aa9.76□□□□□ -0.85
HLA-DOB-209ENST00000488325 A0A0D9SG52 128 aa9.75□□□□□ -0.85
HLA-DOB-209ENST00000488325 MARCH11A6NNE9 402 aa9.75□□□□□ -0.85
HLA-DOB-209ENST00000488325 FAM90A26D6RGX4 464 aa9.75□□□□□ -0.85
HLA-DOB-209ENST00000488325 E5RGE8 158 aa9.75□□□□□ -0.85
HLA-DOB-209ENST00000488325 K7EPK0 472 aa9.75□□□□□ -0.85
HLA-DOB-209ENST00000488325 DEDDO75618 318 aa9.75□□□□□ -0.85
HLA-DOB-209ENST00000488325 CRYZL1O95825 349 aa9.75□□□□□ -0.85
HLA-DOB-209ENST00000488325 KRASP01116 189 aa9.75□□□□□ -0.85
HLA-DOB-209ENST00000488325 MBPP02686 304 aaPredicted RBP9.75□□□□□ -0.85
HLA-DOB-209ENST00000488325 GAPDHP04406 335 aaKnown RBP9.75□□□□□ -0.85
HLA-DOB-209ENST00000488325 ARG1P05089 322 aa9.75□□□□□ -0.85
HLA-DOB-209ENST00000488325 MC5RP33032 325 aa9.75□□□□□ -0.85
HLA-DOB-209ENST00000488325 G6PCP35575 357 aa9.75□□□□□ -0.85
HLA-DOB-209ENST00000488325 CEACAM3P40198 252 aa9.75□□□□□ -0.85
HLA-DOB-209ENST00000488325 BRWD1-AS2P59051 145 aa9.75□□□□□ -0.85
HLA-DOB-209ENST00000488325 PAX2Q02962 417 aa9.75□□□□□ -0.85
HLA-DOB-209ENST00000488325 ZNF345Q14585 488 aa9.75□□□□□ -0.85
HLA-DOB-209ENST00000488325 C1orf229Q6ZS94 237 aaPredicted RBP9.75□□□□□ -0.85
HLA-DOB-209ENST00000488325 ACOT7LQ6ZUV0 252 aa9.75□□□□□ -0.85
HLA-DOB-209ENST00000488325 VMO1Q7Z5L0 202 aa9.75□□□□□ -0.85
HLA-DOB-209ENST00000488325 PDPNQ86YL7 162 aa9.75□□□□□ -0.85
HLA-DOB-209ENST00000488325 FAM71E2Q8N5Q1 922 aa9.75□□□□□ -0.85
HLA-DOB-209ENST00000488325 DMBX1Q8NFW5 382 aa9.75□□□□□ -0.85
HLA-DOB-209ENST00000488325 ST6GALNAC6Q969X2 333 aa9.75□□□□□ -0.85
HLA-DOB-209ENST00000488325 RPEQ96AT9 228 aa9.75□□□□□ -0.85
HLA-DOB-209ENST00000488325 SIRPDQ9H106 197 aa9.75□□□□□ -0.85
HLA-DOB-209ENST00000488325 SIRT7Q9NRC8 400 aa9.75□□□□□ -0.85
HLA-DOB-209ENST00000488325 ZNRD1Q9P1U0 126 aa9.75□□□□□ -0.85
HLA-DOB-209ENST00000488325 CACNG5Q9UF02 275 aa9.75□□□□□ -0.85
HLA-DOB-209ENST00000488325 CACFD1Q9UGQ2 172 aa9.75□□□□□ -0.85
HLA-DOB-209ENST00000488325 TNFSF18Q9UNG2 199 aa9.75□□□□□ -0.85
HLA-DOB-209ENST00000488325 NSG2Q9Y328 171 aa9.75□□□□□ -0.85
HLA-DOB-209ENST00000488325 A0A0G2JRQ6 117 aa9.74□□□□□ -0.85
HLA-DOB-209ENST00000488325 LEUTXA8MZ59 168 aa9.74□□□□□ -0.85
HLA-DOB-209ENST00000488325 H0YJW9 148 aa9.74□□□□□ -0.85
HLA-DOB-209ENST00000488325 BUB1B-PAK6H3BSN5 160 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms