RNA–Protein interactions for RNA: ENST00000487485.1

TOP3B-216, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 725 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-216ENST00000487485 CITED1Q99966 193 aa8.47□□□□□ -1.05
TOP3B-216ENST00000487485 RTBDNQ9BSG5 229 aaPredicted RBP8.47□□□□□ -1.05
TOP3B-216ENST00000487485 FBXL15Q9H469 300 aa8.47□□□□□ -1.05
TOP3B-216ENST00000487485 C16orf95Q9H693 158 aa8.47□□□□□ -1.05
TOP3B-216ENST00000487485 ZNF702PQ9H963 129 aa8.47□□□□□ -1.05
TOP3B-216ENST00000487485 LIN7CQ9NUP9 197 aaKnown RBP8.47□□□□□ -1.05
TOP3B-216ENST00000487485 C14orf166Q9Y224 244 aaKnown RBP8.47□□□□□ -1.05
TOP3B-216ENST00000487485 RRHO14718 337 aa8.46□□□□□ -1.06
TOP3B-216ENST00000487485 MPPED1O15442 326 aa8.46□□□□□ -1.06
TOP3B-216ENST00000487485 PLA2G10O15496 165 aa8.46□□□□□ -1.06
TOP3B-216ENST00000487485 RBFOX2O43251 390 aaKnown RBP eCLIP8.46□□□□□ -1.06
TOP3B-216ENST00000487485 HPRT1P00492 218 aa8.46□□□□□ -1.06
TOP3B-216ENST00000487485 IGLV2-23P01705 113 aa8.46□□□□□ -1.06
TOP3B-216ENST00000487485 F2RP25116 425 aa8.46□□□□□ -1.06
TOP3B-216ENST00000487485 CCR6P51684 374 aa8.46□□□□□ -1.06
TOP3B-216ENST00000487485 PLGLAQ15195 96 aa8.46□□□□□ -1.06
TOP3B-216ENST00000487485 PSG5Q15238 335 aa8.46□□□□□ -1.06
TOP3B-216ENST00000487485 C5orf64Q2M2E5 130 aa8.46□□□□□ -1.06
TOP3B-216ENST00000487485 LIN54Q6MZP7 749 aa8.46□□□□□ -1.06
TOP3B-216ENST00000487485 Q8N2B8 174 aa8.46□□□□□ -1.06
TOP3B-216ENST00000487485 TCTEX1D1Q8N7M0 179 aa8.46□□□□□ -1.06
TOP3B-216ENST00000487485 CCDC71LQ8N9Z2 235 aa8.46□□□□□ -1.06
TOP3B-216ENST00000487485 OR2T6Q8NHC8 308 aa8.46□□□□□ -1.06
TOP3B-216ENST00000487485 LINC01006Q8NI28 216 aa8.46□□□□□ -1.06
TOP3B-216ENST00000487485 CD300LFQ8TDQ1 290 aa8.46□□□□□ -1.06
TOP3B-216ENST00000487485 C7orf50Q9BRJ6 194 aaKnown RBP8.46□□□□□ -1.06
TOP3B-216ENST00000487485 C5orf66Q9H5L9 145 aa8.46□□□□□ -1.06
TOP3B-216ENST00000487485 BEX1Q9HBH7 125 aa8.46□□□□□ -1.06
TOP3B-216ENST00000487485 COPZ2Q9P299 210 aa8.46□□□□□ -1.06
TOP3B-216ENST00000487485 METTL1Q9UBP6 276 aaKnown RBP8.46□□□□□ -1.06
TOP3B-216ENST00000487485 VSIG4Q9Y279 399 aa8.46□□□□□ -1.06
TOP3B-216ENST00000487485 SIGLEC9Q9Y336 463 aa8.46□□□□□ -1.06
TOP3B-216ENST00000487485 A0A1B0GUS0 222 aa8.45□□□□□ -1.06
TOP3B-216ENST00000487485 CLPSL1A2RUU4 121 aa8.45□□□□□ -1.06
TOP3B-216ENST00000487485 M0QZ24 198 aa8.45□□□□□ -1.06
TOP3B-216ENST00000487485 LYRM1O43325 122 aa8.45□□□□□ -1.06
TOP3B-216ENST00000487485 SLC25A17O43808 307 aa8.45□□□□□ -1.06
TOP3B-216ENST00000487485 UPK1BO75841 260 aa8.45□□□□□ -1.06
TOP3B-216ENST00000487485 SPDEFO95238 335 aa8.45□□□□□ -1.06
TOP3B-216ENST00000487485 HRASP01112 189 aa8.45□□□□□ -1.06
TOP3B-216ENST00000487485 LPAR6P43657 344 aa8.45□□□□□ -1.06
TOP3B-216ENST00000487485 VMA21Q3ZAQ7 101 aa8.45□□□□□ -1.06
TOP3B-216ENST00000487485 CLCC1Q96S66 551 aa8.45□□□□□ -1.06
TOP3B-216ENST00000487485 SLC25A21Q9BQT8 299 aaPredicted RBP8.45□□□□□ -1.06
TOP3B-216ENST00000487485 RNF114Q9Y508 228 aa8.45□□□□□ -1.06
TOP3B-216ENST00000487485 TEX13DA0A0J9YY54 714 aaPredicted RBP8.44□□□□□ -1.06
TOP3B-216ENST00000487485 C3orf85A0A1B0GTC6 90 aa8.44□□□□□ -1.06
TOP3B-216ENST00000487485 LINC01548A6NM66 108 aa8.44□□□□□ -1.06
TOP3B-216ENST00000487485 FCN1O00602 326 aa8.44□□□□□ -1.06
TOP3B-216ENST00000487485 S1PR2O95136 353 aa8.44□□□□□ -1.06
TOP3B-216ENST00000487485 IGHG2P01859 326 aa8.44□□□□□ -1.06
TOP3B-216ENST00000487485 HLA-DRB1P01911 266 aa8.44□□□□□ -1.06
TOP3B-216ENST00000487485 CRYGBP07316 175 aa8.44□□□□□ -1.06
TOP3B-216ENST00000487485 VSIG10L2P0DP72 767 aa8.44□□□□□ -1.06
TOP3B-216ENST00000487485 BTCP35070 178 aa8.44□□□□□ -1.06
TOP3B-216ENST00000487485 VDAC2P45880 294 aaPredicted RBP8.44□□□□□ -1.06
TOP3B-216ENST00000487485 TAS2R31P59538 309 aa8.44□□□□□ -1.06
TOP3B-216ENST00000487485 UBE2KP61086 200 aa8.44□□□□□ -1.06
TOP3B-216ENST00000487485 IFITM3Q01628 133 aa8.44□□□□□ -1.06
TOP3B-216ENST00000487485 RBMS2Q15434 407 aaKnown RBP8.44□□□□□ -1.06
TOP3B-216ENST00000487485 TMEM95Q3KNT9 176 aa8.44□□□□□ -1.06
TOP3B-216ENST00000487485 ZNF585BQ52M93 769 aa8.44□□□□□ -1.06
TOP3B-216ENST00000487485 SLC35E3Q7Z769 313 aa8.44□□□□□ -1.06
TOP3B-216ENST00000487485 PPP1R27Q86WC6 154 aa8.44□□□□□ -1.06
TOP3B-216ENST00000487485 VKORC1L1Q8N0U8 176 aa8.44□□□□□ -1.06
TOP3B-216ENST00000487485 TEX45Q8NA69 505 aa8.44□□□□□ -1.06
TOP3B-216ENST00000487485 ADAD2Q8NCV1 583 aaKnown RBP8.44□□□□□ -1.06
TOP3B-216ENST00000487485 HSPB9Q9BQS6 159 aa8.44□□□□□ -1.06
TOP3B-216ENST00000487485 AIFM2Q9BRQ8 373 aa8.44□□□□□ -1.06
TOP3B-216ENST00000487485 PLEKHA2Q9HB19 425 aa8.44□□□□□ -1.06
TOP3B-216ENST00000487485 FAM212BQ9NTI7 297 aaPredicted RBP8.44□□□□□ -1.06
TOP3B-216ENST00000487485 SERTAD4Q9NUC0 356 aa8.44□□□□□ -1.06
TOP3B-216ENST00000487485 IGHV7-81A0A0B4J1V7 117 aa8.43□□□□□ -1.06
TOP3B-216ENST00000487485 CRYM-AS1A6NIL9 109 aa8.43□□□□□ -1.06
TOP3B-216ENST00000487485 H0Y980 276 aa8.43□□□□□ -1.06
TOP3B-216ENST00000487485 PLXNB1O43157 2135 aa8.43□□□□□ -1.06
TOP3B-216ENST00000487485 OR2A4O95047 310 aa8.43□□□□□ -1.06
TOP3B-216ENST00000487485 NDUFB6O95139 128 aa8.43□□□□□ -1.06
TOP3B-216ENST00000487485 SAA1P0DJI8 122 aaPredicted RBP8.43□□□□□ -1.06
TOP3B-216ENST00000487485 NQO2P16083 231 aa8.43□□□□□ -1.06
TOP3B-216ENST00000487485 AKR1C4P17516 323 aa8.43□□□□□ -1.06
TOP3B-216ENST00000487485 SP6Q3SY56 376 aa8.43□□□□□ -1.06
TOP3B-216ENST00000487485 SSX9Q7RTT3 188 aa8.43□□□□□ -1.06
TOP3B-216ENST00000487485 TMED4Q7Z7H5 227 aa8.43□□□□□ -1.06
TOP3B-216ENST00000487485 FOXRED2Q8IWF2 684 aa8.43□□□□□ -1.06
TOP3B-216ENST00000487485 SGPP2Q8IWX5 399 aa8.43□□□□□ -1.06
TOP3B-216ENST00000487485 TMEM230Q96A57 120 aa8.43□□□□□ -1.06
TOP3B-216ENST00000487485 R3HDM4Q96D70 268 aa8.43□□□□□ -1.06
TOP3B-216ENST00000487485 RHOVQ96L33 236 aa8.43□□□□□ -1.06
TOP3B-216ENST00000487485 OR2A7Q96R45 310 aa8.43□□□□□ -1.06
TOP3B-216ENST00000487485 TP53RKQ96S44 253 aa8.43□□□□□ -1.06
TOP3B-216ENST00000487485 TSC22D3Q99576 134 aa8.43□□□□□ -1.06
TOP3B-216ENST00000487485 NAA60Q9H7X0 242 aa8.43□□□□□ -1.06
TOP3B-216ENST00000487485 TPSG1Q9NRR2 321 aa8.43□□□□□ -1.06
TOP3B-216ENST00000487485 TBC1D24Q9ULP9 559 aa8.43□□□□□ -1.06
TOP3B-216ENST00000487485 KCNIP3Q9Y2W7 256 aa8.43□□□□□ -1.06
TOP3B-216ENST00000487485 B3GALNT1O75752 331 aa8.42□□□□□ -1.06
TOP3B-216ENST00000487485 TSPAN15O95858 294 aa8.42□□□□□ -1.06
TOP3B-216ENST00000487485 CA2P00918 260 aa8.42□□□□□ -1.06
TOP3B-216ENST00000487485 KRASP01116 189 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms