RNA–Protein interactions for RNA: ENST00000487211.5

RTFDC1-209, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-209ENST00000487211 TAF15Q92804 592 aaKnown RBP eCLIP4.92□□□□□ -1.62
RTFDC1-209ENST00000487211 RAB3CQ96E17 227 aa4.92□□□□□ -1.62
RTFDC1-209ENST00000487211 DCSTAMPQ9H295 470 aa4.92□□□□□ -1.62
RTFDC1-209ENST00000487211 TAF9BQ9HBM6 251 aa4.92□□□□□ -1.62
RTFDC1-209ENST00000487211 RHBDL2Q9NX52 303 aa4.92□□□□□ -1.62
RTFDC1-209ENST00000487211 ABRACLQ9P1F3 81 aa4.92□□□□□ -1.62
RTFDC1-209ENST00000487211 ZNF230Q9UIE0 474 aaPredicted RBP4.92□□□□□ -1.62
RTFDC1-209ENST00000487211 PSG11Q9UQ72 335 aa4.92□□□□□ -1.62
RTFDC1-209ENST00000487211 DYNC2H1Q8NCM8 4307 aaKnown RBP4.92□□□□□ -1.62
RTFDC1-209ENST00000487211 A0A075B6Q4 140 aa4.91□□□□□ -1.62
RTFDC1-209ENST00000487211 IGKV1D-8A0A087WSZ0 117 aa4.91□□□□□ -1.62
RTFDC1-209ENST00000487211 TRBV6-6A0A0A6YYG2 114 aa4.91□□□□□ -1.62
RTFDC1-209ENST00000487211 LY6LH3BQJ8 138 aa4.91□□□□□ -1.62
RTFDC1-209ENST00000487211 BUB1B-PAK6H3BSN5 160 aa4.91□□□□□ -1.62
RTFDC1-209ENST00000487211 SLC31A2O15432 143 aa4.91□□□□□ -1.62
RTFDC1-209ENST00000487211 IGHV4-59P01825 116 aa4.91□□□□□ -1.62
RTFDC1-209ENST00000487211 MELTFP08582 738 aa4.91□□□□□ -1.62
RTFDC1-209ENST00000487211 SCTP09683 121 aa4.91□□□□□ -1.62
RTFDC1-209ENST00000487211 PTHLHP12272 177 aa4.91□□□□□ -1.62
RTFDC1-209ENST00000487211 HIST1H1DP16402 221 aaKnown RBP4.91□□□□□ -1.62
RTFDC1-209ENST00000487211 BAMBIQ13145 260 aa4.91□□□□□ -1.62
RTFDC1-209ENST00000487211 DIAPH2-AS1Q14236 149 aa4.91□□□□□ -1.62
RTFDC1-209ENST00000487211 HMGN3Q15651 99 aa4.91□□□□□ -1.62
RTFDC1-209ENST00000487211 SSX2Q16385 188 aa4.91□□□□□ -1.62
RTFDC1-209ENST00000487211 KRTAP24-1Q3LI83 254 aa4.91□□□□□ -1.62
RTFDC1-209ENST00000487211 CT45A1Q5HYN5 189 aa4.91□□□□□ -1.62
RTFDC1-209ENST00000487211 OR52W1Q6IF63 320 aa4.91□□□□□ -1.62
RTFDC1-209ENST00000487211 CROCCP3Q8IVE0 287 aa4.91□□□□□ -1.62
RTFDC1-209ENST00000487211 OR10A7Q8NGE5 316 aa4.91□□□□□ -1.62
RTFDC1-209ENST00000487211 OR52M1Q8NGK5 317 aa4.91□□□□□ -1.62
RTFDC1-209ENST00000487211 CT45A3Q8NHU0 189 aa4.91□□□□□ -1.62
RTFDC1-209ENST00000487211 RBMXL1Q96E39 390 aaKnown RBP4.91□□□□□ -1.62
RTFDC1-209ENST00000487211 MALSU1Q96EH3 234 aa4.91□□□□□ -1.62
RTFDC1-209ENST00000487211 CMSS1Q9BQ75 279 aaKnown RBP4.91□□□□□ -1.62
RTFDC1-209ENST00000487211 CLEC7AQ9BXN2 247 aa4.91□□□□□ -1.62
RTFDC1-209ENST00000487211 ABCG5Q9H222 651 aa4.91□□□□□ -1.62
RTFDC1-209ENST00000487211 RIMS4Q9H426 269 aaPredicted RBP4.91□□□□□ -1.62
RTFDC1-209ENST00000487211 TNFRSF19Q9NS68 423 aa4.91□□□□□ -1.62
RTFDC1-209ENST00000487211 COMMD3Q9UBI1 195 aa4.91□□□□□ -1.62
RTFDC1-209ENST00000487211 HILPDAQ9Y5L2 63 aa4.91□□□□□ -1.62
RTFDC1-209ENST00000487211 ETV7Q9Y603 341 aa4.91□□□□□ -1.62
RTFDC1-209ENST00000487211 TRAV18A0A075B6X5 111 aa4.9□□□□□ -1.63
RTFDC1-209ENST00000487211 IGKV1-6A0A0C4DH72 117 aa4.9□□□□□ -1.63
RTFDC1-209ENST00000487211 H3BMQ9 156 aa4.9□□□□□ -1.63
RTFDC1-209ENST00000487211 SDCBPO00560 298 aaPredicted RBP4.9□□□□□ -1.63
RTFDC1-209ENST00000487211 TOR1AO14656 332 aa4.9□□□□□ -1.63
RTFDC1-209ENST00000487211 SSX5O60225 188 aa4.9□□□□□ -1.63
RTFDC1-209ENST00000487211 HPGDSO60760 199 aa4.9□□□□□ -1.63
RTFDC1-209ENST00000487211 EIF4EP06730 217 aaKnown RBP4.9□□□□□ -1.63
RTFDC1-209ENST00000487211 FCGR3AP08637 254 aa4.9□□□□□ -1.63
RTFDC1-209ENST00000487211 FBP1P09467 338 aa4.9□□□□□ -1.63
RTFDC1-209ENST00000487211 CD3GP09693 182 aa4.9□□□□□ -1.63
RTFDC1-209ENST00000487211 GSTT2P0CG29 244 aa4.9□□□□□ -1.63
RTFDC1-209ENST00000487211 GSTT2BP0CG30 244 aa4.9□□□□□ -1.63
RTFDC1-209ENST00000487211 ELK1P19419 428 aa4.9□□□□□ -1.63
RTFDC1-209ENST00000487211 HTR1DP28221 377 aa4.9□□□□□ -1.63
RTFDC1-209ENST00000487211 PPP1CCP36873 323 aaKnown RBP4.9□□□□□ -1.63
RTFDC1-209ENST00000487211 GNG10P50151 68 aa4.9□□□□□ -1.63
RTFDC1-209ENST00000487211 PRRX1P54821 245 aa4.9□□□□□ -1.63
RTFDC1-209ENST00000487211 KRTAP10-11P60412 298 aa4.9□□□□□ -1.63
RTFDC1-209ENST00000487211 UBA52P62987 128 aaKnown RBP4.9□□□□□ -1.63
RTFDC1-209ENST00000487211 DLK1P80370 383 aa4.9□□□□□ -1.63
RTFDC1-209ENST00000487211 HTD2P86397 168 aa4.9□□□□□ -1.63
RTFDC1-209ENST00000487211 SCGB2A2Q13296 93 aa4.9□□□□□ -1.63
RTFDC1-209ENST00000487211 GNMTQ14749 295 aa4.9□□□□□ -1.63
RTFDC1-209ENST00000487211 FAM189A2Q15884 450 aa4.9□□□□□ -1.63
RTFDC1-209ENST00000487211 HLA-DRB5Q30154 266 aa4.9□□□□□ -1.63
RTFDC1-209ENST00000487211 MORN2Q502X0 79 aa4.9□□□□□ -1.63
RTFDC1-209ENST00000487211 C6orf183Q5T699 404 aa4.9□□□□□ -1.63
RTFDC1-209ENST00000487211 MINOS1Q5TGZ0 78 aa4.9□□□□□ -1.63
RTFDC1-209ENST00000487211 HACD4Q5VWC8 232 aa4.9□□□□□ -1.63
RTFDC1-209ENST00000487211 C16orf87Q6PH81 154 aa4.9□□□□□ -1.63
RTFDC1-209ENST00000487211 CCBE1Q6UXH8 406 aaPredicted RBP4.9□□□□□ -1.63
RTFDC1-209ENST00000487211 RBMS3Q6XE24 437 aaKnown RBP4.9□□□□□ -1.63
RTFDC1-209ENST00000487211 SAMD12Q8N8I0 201 aa4.9□□□□□ -1.63
RTFDC1-209ENST00000487211 ZNF439Q8NDP4 499 aa4.9□□□□□ -1.63
RTFDC1-209ENST00000487211 OR10V1Q8NGI7 309 aa4.9□□□□□ -1.63
RTFDC1-209ENST00000487211 OR9G1Q8NH87 305 aa4.9□□□□□ -1.63
RTFDC1-209ENST00000487211 ZNF596Q8TC21 504 aa4.9□□□□□ -1.63
RTFDC1-209ENST00000487211 DYNC2LI1Q8TCX1 351 aa4.9□□□□□ -1.63
RTFDC1-209ENST00000487211 RAB2BQ8WUD1 216 aa4.9□□□□□ -1.63
RTFDC1-209ENST00000487211 MAFIPQ8WZ33 124 aa4.9□□□□□ -1.63
RTFDC1-209ENST00000487211 GALMQ96C23 342 aa4.9□□□□□ -1.63
RTFDC1-209ENST00000487211 ISOC1Q96CN7 298 aa4.9□□□□□ -1.63
RTFDC1-209ENST00000487211 S100A16Q96FQ6 103 aaKnown RBP4.9□□□□□ -1.63
RTFDC1-209ENST00000487211 SSX3Q99909 188 aa4.9□□□□□ -1.63
RTFDC1-209ENST00000487211 ST6GALNAC5Q9BVH7 336 aa4.9□□□□□ -1.63
RTFDC1-209ENST00000487211 CHIAQ9BZP6 476 aa4.9□□□□□ -1.63
RTFDC1-209ENST00000487211 PARP12Q9H0J9 701 aaKnown RBP4.9□□□□□ -1.63
RTFDC1-209ENST00000487211 MMP28Q9H239 520 aa4.9□□□□□ -1.63
RTFDC1-209ENST00000487211 DNAJC4Q9NNZ3 241 aa4.9□□□□□ -1.63
RTFDC1-209ENST00000487211 OR2S2Q9NQN1 319 aa4.9□□□□□ -1.63
RTFDC1-209ENST00000487211 KCNIP1Q9NZI2 227 aa4.9□□□□□ -1.63
RTFDC1-209ENST00000487211 DPM3Q9P2X0 92 aa4.9□□□□□ -1.63
RTFDC1-209ENST00000487211 WDR83OSQ9Y284 106 aa4.9□□□□□ -1.63
RTFDC1-209ENST00000487211 TBL2Q9Y4P3 447 aaKnown RBP4.9□□□□□ -1.63
RTFDC1-209ENST00000487211 MINOS1-NBL1R4GNA1 71 aa4.9□□□□□ -1.63
RTFDC1-209ENST00000487211 CMYA5Q8N3K9 4069 aa4.9□□□□□ -1.63
RTFDC1-209ENST00000487211 A0A1W2PN81 502 aa4.89□□□□□ -1.63
RTFDC1-209ENST00000487211 TMEM235A6NFC5 223 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms