RNA–Protein interactions for RNA: ENST00000487169.5

HDLBP-241, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 4,339 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-241ENST00000487169 MRPL13Q9BYD1 178 aaKnown RBP11.37□□□□□ -0.59
HDLBP-241ENST00000487169 RBKSQ9H477 322 aa11.37□□□□□ -0.59
HDLBP-241ENST00000487169 PLCE1Q9P212 2302 aa11.37□□□□□ -0.59
HDLBP-241ENST00000487169 IGHV1-2P23083 117 aa11.37□□□□□ -0.59
HDLBP-241ENST00000487169 TFPI2P48307 235 aa11.37□□□□□ -0.59
HDLBP-241ENST00000487169 H2BFSP57053 126 aa11.37□□□□□ -0.59
HDLBP-241ENST00000487169 NRN1LQ496H8 165 aa11.37□□□□□ -0.59
HDLBP-241ENST00000487169 COX19Q49B96 90 aa11.37□□□□□ -0.59
HDLBP-241ENST00000487169 ASPHD2Q6ICH7 369 aa11.37□□□□□ -0.59
HDLBP-241ENST00000487169 ZNF818PQ6ZRF7 136 aa11.37□□□□□ -0.59
HDLBP-241ENST00000487169 C1orf162Q8NEQ5 155 aaPredicted RBP11.37□□□□□ -0.59
HDLBP-241ENST00000487169 SNRNP40Q96DI7 357 aaKnown RBP11.37□□□□□ -0.59
HDLBP-241ENST00000487169 B4DEV8 164 aa11.37□□□□□ -0.59
HDLBP-241ENST00000487169 ZG16O60844 167 aa11.37□□□□□ -0.59
HDLBP-241ENST00000487169 HIST1H1EP10412 219 aaKnown RBP11.37□□□□□ -0.59
HDLBP-241ENST00000487169 SULT1A2P50226 295 aa11.37□□□□□ -0.59
HDLBP-241ENST00000487169 TNFRSF9Q07011 255 aa11.37□□□□□ -0.59
HDLBP-241ENST00000487169 IQCJQ1A5X6 159 aa11.37□□□□□ -0.59
HDLBP-241ENST00000487169 ARTNQ5T4W7 220 aa11.37□□□□□ -0.59
HDLBP-241ENST00000487169 MIC13Q5XKP0 118 aa11.37□□□□□ -0.59
HDLBP-241ENST00000487169 ANAPC16Q96DE5 110 aa11.37□□□□□ -0.59
HDLBP-241ENST00000487169 POM121Q96HA1 1249 aa11.37□□□□□ -0.59
HDLBP-241ENST00000487169 TMEM106BQ9NUM4 274 aa11.37□□□□□ -0.59
HDLBP-241ENST00000487169 TSC2P49815 1807 aa11.36□□□□□ -0.59
HDLBP-241ENST00000487169 A0A1B0GTI1 187 aa11.36□□□□□ -0.59
HDLBP-241ENST00000487169 PRSS1P07477 247 aa11.36□□□□□ -0.59
HDLBP-241ENST00000487169 BCL2P10415 239 aa11.36□□□□□ -0.59
HDLBP-241ENST00000487169 VKORC1L1Q8N0U8 176 aa11.36□□□□□ -0.59
HDLBP-241ENST00000487169 OR2D3Q8NGH3 330 aa11.36□□□□□ -0.59
HDLBP-241ENST00000487169 IL22RA2Q969J5 263 aa11.36□□□□□ -0.59
HDLBP-241ENST00000487169 TMEM186Q96B77 213 aa11.36□□□□□ -0.59
HDLBP-241ENST00000487169 IGHV2OR16-5A0A0B4J2B6 119 aa11.36□□□□□ -0.59
HDLBP-241ENST00000487169 FAM90A26D6RGX4 464 aa11.36□□□□□ -0.59
HDLBP-241ENST00000487169 LHX2P50458 406 aa11.36□□□□□ -0.59
HDLBP-241ENST00000487169 SLC35E4Q6ICL7 350 aa11.36□□□□□ -0.59
HDLBP-241ENST00000487169 OR52M1Q8NGK5 317 aa11.36□□□□□ -0.59
HDLBP-241ENST00000487169 SLC2A8Q9NY64 477 aa11.36□□□□□ -0.59
HDLBP-241ENST00000487169 IGHV3-48P01763 117 aa11.36□□□□□ -0.59
HDLBP-241ENST00000487169 CD74P04233 296 aa11.36□□□□□ -0.59
HDLBP-241ENST00000487169 ZNF735P0CB33 412 aa11.36□□□□□ -0.59
HDLBP-241ENST00000487169 BTCP35070 178 aa11.36□□□□□ -0.59
HDLBP-241ENST00000487169 HNRNPA3P51991 378 aaKnown RBP11.36□□□□□ -0.59
HDLBP-241ENST00000487169 CLDN18P56856 261 aa11.36□□□□□ -0.59
HDLBP-241ENST00000487169 ZNF660Q6AZW8 331 aaPredicted RBP11.36□□□□□ -0.59
HDLBP-241ENST00000487169 CYB561D1Q8N8Q1 229 aa11.36□□□□□ -0.59
HDLBP-241ENST00000487169 OR5AU1Q8NGC0 362 aa11.36□□□□□ -0.59
HDLBP-241ENST00000487169 PIMREGQ9BSJ6 248 aa11.36□□□□□ -0.59
HDLBP-241ENST00000487169 QTRT1Q9BXR0 403 aaKnown RBP11.36□□□□□ -0.59
HDLBP-241ENST00000487169 C12orf77C9JDV5 145 aa11.36□□□□□ -0.59
HDLBP-241ENST00000487169 E9PQ18 207 aa11.36□□□□□ -0.59
HDLBP-241ENST00000487169 LINC00271P0C7V0 271 aa11.36□□□□□ -0.59
HDLBP-241ENST00000487169 ZP1P60852 638 aa11.36□□□□□ -0.59
HDLBP-241ENST00000487169 SLC35B1P78383 322 aa11.36□□□□□ -0.59
HDLBP-241ENST00000487169 BSPH1Q075Z2 132 aa11.36□□□□□ -0.59
HDLBP-241ENST00000487169 RIGQ13278 110 aa11.36□□□□□ -0.59
HDLBP-241ENST00000487169 LY6EQ16553 131 aa11.36□□□□□ -0.59
HDLBP-241ENST00000487169 ATRAIDQ6UW56 229 aa11.36□□□□□ -0.59
HDLBP-241ENST00000487169 PQLC2Q6ZP29 291 aa11.36□□□□□ -0.59
HDLBP-241ENST00000487169 C17orf82Q86X59 251 aaPredicted RBP11.36□□□□□ -0.59
HDLBP-241ENST00000487169 SELENOHQ8IZQ5 122 aaKnown RBP11.36□□□□□ -0.59
HDLBP-241ENST00000487169 FAM216BQ8N7L0 139 aa11.36□□□□□ -0.59
HDLBP-241ENST00000487169 MRPS18CQ9Y3D5 142 aaKnown RBP11.36□□□□□ -0.59
HDLBP-241ENST00000487169 IGHV3-35A0A0C4DH35 117 aa11.35□□□□□ -0.59
HDLBP-241ENST00000487169 UCP3P55916 312 aa11.35□□□□□ -0.59
HDLBP-241ENST00000487169 SGMS2Q8NHU3 365 aa11.35□□□□□ -0.59
HDLBP-241ENST00000487169 RBM14Q96PK6 669 aaKnown RBP11.35□□□□□ -0.59
HDLBP-241ENST00000487169 C1QTNF5Q9BXJ0 243 aa11.35□□□□□ -0.59
HDLBP-241ENST00000487169 FOXH1O75593 365 aa11.35□□□□□ -0.59
HDLBP-241ENST00000487169 EIF3GO75821 320 aaKnown RBP eCLIP11.35□□□□□ -0.59
HDLBP-241ENST00000487169 MELTFP08582 738 aa11.35□□□□□ -0.59
HDLBP-241ENST00000487169 CELA3BP08861 270 aa11.35□□□□□ -0.59
HDLBP-241ENST00000487169 MEOX2P50222 304 aa11.35□□□□□ -0.59
HDLBP-241ENST00000487169 RBPMS2Q6ZRY4 209 aaKnown RBP11.35□□□□□ -0.59
HDLBP-241ENST00000487169 BPIFA4PQ86YQ2 179 aa11.35□□□□□ -0.59
HDLBP-241ENST00000487169 RAXQ9Y2V3 346 aa11.35□□□□□ -0.59
HDLBP-241ENST00000487169 BMPR1BO00238 502 aa11.35□□□□□ -0.59
HDLBP-241ENST00000487169 PDLIM4P50479 330 aa11.35□□□□□ -0.59
HDLBP-241ENST00000487169 MFAP2P55001 183 aa11.35□□□□□ -0.59
HDLBP-241ENST00000487169 MEF2BQ02080 365 aaPredicted RBP11.35□□□□□ -0.59
HDLBP-241ENST00000487169 VAMP3Q15836 100 aa11.35□□□□□ -0.59
HDLBP-241ENST00000487169 NR2C2APQ86WQ0 139 aa11.35□□□□□ -0.59
HDLBP-241ENST00000487169 SNURFLB1AK76 121 aa11.34□□□□□ -0.59
HDLBP-241ENST00000487169 NDUFB4O95168 129 aa11.34□□□□□ -0.59
HDLBP-241ENST00000487169 FOSL1P15407 271 aa11.34□□□□□ -0.59
HDLBP-241ENST00000487169 ACP7Q6ZNF0 438 aa11.34□□□□□ -0.59
HDLBP-241ENST00000487169 RAB24Q969Q5 203 aa11.34□□□□□ -0.59
HDLBP-241ENST00000487169 PARD6AQ9NPB6 346 aa11.34□□□□□ -0.59
HDLBP-241ENST00000487169 IGHV3OR16-10A0A075B7F0 116 aa11.34□□□□□ -0.59
HDLBP-241ENST00000487169 F12P00748 615 aaPredicted RBP11.34□□□□□ -0.59
HDLBP-241ENST00000487169 CCKARP32238 428 aa11.34□□□□□ -0.59
HDLBP-241ENST00000487169 IER3P46695 156 aa11.34□□□□□ -0.59
HDLBP-241ENST00000487169 RPS11P62280 158 aaKnown RBP eCLIP11.34□□□□□ -0.59
HDLBP-241ENST00000487169 ZNF430Q9H8G1 570 aaPredicted RBP11.34□□□□□ -0.59
HDLBP-241ENST00000487169 A0A0G2JK05 382 aa11.34□□□□□ -0.59
HDLBP-241ENST00000487169 PCSK4Q6UW60 755 aa11.34□□□□□ -0.59
HDLBP-241ENST00000487169 PRNTQ86SH4 94 aa11.34□□□□□ -0.59
HDLBP-241ENST00000487169 LYRM2Q9NU23 88 aaPredicted RBP11.34□□□□□ -0.59
HDLBP-241ENST00000487169 FUT9Q9Y231 359 aa11.34□□□□□ -0.59
HDLBP-241ENST00000487169 TEX50A0A1B0GTY4 177 aa11.34□□□□□ -0.59
HDLBP-241ENST00000487169 PGPA6NDG6 321 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms