RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 NEK7Q8TDX7 302 aa3□□□□□ -1.93
SNRNP40-205ENST00000486941 TMEM106AQ96A25 262 aa3□□□□□ -1.93
SNRNP40-205ENST00000486941 ISOC1Q96CN7 298 aa3□□□□□ -1.93
SNRNP40-205ENST00000486941 FLYWCH2Q96CP2 140 aaKnown RBP3□□□□□ -1.93
SNRNP40-205ENST00000486941 MRPS24Q96EL2 167 aaKnown RBP3□□□□□ -1.93
SNRNP40-205ENST00000486941 ZNF414Q96IQ9 312 aa3□□□□□ -1.93
SNRNP40-205ENST00000486941 Q96MT0 163 aa3□□□□□ -1.93
SNRNP40-205ENST00000486941 OR5B12Q96R08 314 aa3□□□□□ -1.93
SNRNP40-205ENST00000486941 OR4C12Q96R67 309 aa3□□□□□ -1.93
SNRNP40-205ENST00000486941 ZNF251Q9BRH9 671 aa3□□□□□ -1.93
SNRNP40-205ENST00000486941 ANKRD60Q9BZ19 345 aa3□□□□□ -1.93
SNRNP40-205ENST00000486941 FAM192AQ9GZU8 254 aa3□□□□□ -1.93
SNRNP40-205ENST00000486941 TOLLIPQ9H0E2 274 aa3□□□□□ -1.93
SNRNP40-205ENST00000486941 CST11Q9H112 138 aa3□□□□□ -1.93
SNRNP40-205ENST00000486941 OR2S2Q9NQN1 319 aa3□□□□□ -1.93
SNRNP40-205ENST00000486941 TAS2R4Q9NYW5 299 aa3□□□□□ -1.93
SNRNP40-205ENST00000486941 RCC2Q9P258 522 aaKnown RBP3□□□□□ -1.93
SNRNP40-205ENST00000486941 GNG12Q9UBI6 72 aa3□□□□□ -1.93
SNRNP40-205ENST00000486941 TRAPPC2LQ9UL33 140 aa3□□□□□ -1.93
SNRNP40-205ENST00000486941 LRRC42Q9Y546 428 aa3□□□□□ -1.93
SNRNP40-205ENST00000486941 ORC6Q9Y5N6 252 aa3□□□□□ -1.93
SNRNP40-205ENST00000486941 NUBP2Q9Y5Y2 271 aa3□□□□□ -1.93
SNRNP40-205ENST00000486941 SACSQ9NZJ4 4579 aa3□□□□□ -1.93
SNRNP40-205ENST00000486941 DNAH1Q9P2D7 4330 aa3□□□□□ -1.93
SNRNP40-205ENST00000486941 LYSTQ99698 3801 aa2.99□□□□□ -1.93
SNRNP40-205ENST00000486941 A0A087WW49 117 aa2.99□□□□□ -1.93
SNRNP40-205ENST00000486941 A0A1W2PN81 502 aa2.99□□□□□ -1.93
SNRNP40-205ENST00000486941 OGG1O15527 345 aa2.99□□□□□ -1.93
SNRNP40-205ENST00000486941 SOX15O60248 233 aa2.99□□□□□ -1.93
SNRNP40-205ENST00000486941 YPEL1O60688 119 aa2.99□□□□□ -1.93
SNRNP40-205ENST00000486941 GPX5O75715 221 aa2.99□□□□□ -1.93
SNRNP40-205ENST00000486941 SC5DO75845 299 aa2.99□□□□□ -1.93
SNRNP40-205ENST00000486941 NDUFA3O95167 84 aa2.99□□□□□ -1.93
SNRNP40-205ENST00000486941 IGLV1-51P01701 117 aa2.99□□□□□ -1.93
SNRNP40-205ENST00000486941 IGFBP3P17936 291 aaPredicted RBP2.99□□□□□ -1.93
SNRNP40-205ENST00000486941 RCC1P18754 421 aaPredicted RBP2.99□□□□□ -1.93
SNRNP40-205ENST00000486941 FUT3P21217 361 aa2.99□□□□□ -1.93
SNRNP40-205ENST00000486941 CNTFRP26992 372 aa2.99□□□□□ -1.93
SNRNP40-205ENST00000486941 BLVRBP30043 206 aaPredicted RBP2.99□□□□□ -1.93
SNRNP40-205ENST00000486941 CHRNA7P36544 502 aa2.99□□□□□ -1.93
SNRNP40-205ENST00000486941 ALDH3A2P51648 485 aa2.99□□□□□ -1.93
SNRNP40-205ENST00000486941 GTF2A1P52655 376 aaPredicted RBP2.99□□□□□ -1.93
SNRNP40-205ENST00000486941 PPP3R1P63098 170 aa2.99□□□□□ -1.93
SNRNP40-205ENST00000486941 CX3CL1P78423 397 aa2.99□□□□□ -1.93
SNRNP40-205ENST00000486941 HTD2P86397 168 aa2.99□□□□□ -1.93
SNRNP40-205ENST00000486941 PITPNAQ00169 270 aa2.99□□□□□ -1.93
SNRNP40-205ENST00000486941 RIPK1Q13546 671 aa2.99□□□□□ -1.93
SNRNP40-205ENST00000486941 SLC22A6Q4U2R8 563 aa2.99□□□□□ -1.93
SNRNP40-205ENST00000486941 AKIRIN2Q53H80 203 aa2.99□□□□□ -1.93
SNRNP40-205ENST00000486941 DDI2Q5TDH0 399 aa2.99□□□□□ -1.93
SNRNP40-205ENST00000486941 C1orf146Q5VVC0 180 aa2.99□□□□□ -1.93
SNRNP40-205ENST00000486941 RAB12Q6IQ22 244 aa2.99□□□□□ -1.93
SNRNP40-205ENST00000486941 PYHIN1Q6K0P9 492 aa2.99□□□□□ -1.93
SNRNP40-205ENST00000486941 FAM71F2Q6NXP2 309 aa2.99□□□□□ -1.93
SNRNP40-205ENST00000486941 CD200R1LQ6Q8B3 271 aa2.99□□□□□ -1.93
SNRNP40-205ENST00000486941 ZNF833PQ6ZTB9 187 aa2.99□□□□□ -1.93
SNRNP40-205ENST00000486941 SGPP2Q8IWX5 399 aa2.99□□□□□ -1.93
SNRNP40-205ENST00000486941 CDH26Q8IXH8 852 aa2.99□□□□□ -1.93
SNRNP40-205ENST00000486941 OR4K15Q8NH41 348 aa2.99□□□□□ -1.93
SNRNP40-205ENST00000486941 OR1L1Q8NH94 360 aa2.99□□□□□ -1.93
SNRNP40-205ENST00000486941 RHOXF1Q8NHV9 184 aa2.99□□□□□ -1.93
SNRNP40-205ENST00000486941 RGP1Q92546 391 aaPredicted RBP2.99□□□□□ -1.93
SNRNP40-205ENST00000486941 ARPC1AQ92747 370 aa2.99□□□□□ -1.93
SNRNP40-205ENST00000486941 RBMXL1Q96E39 390 aaKnown RBP2.99□□□□□ -1.93
SNRNP40-205ENST00000486941 YPEL2Q96QA6 119 aa2.99□□□□□ -1.93
SNRNP40-205ENST00000486941 ZNF184Q99676 751 aaPredicted RBP2.99□□□□□ -1.93
SNRNP40-205ENST00000486941 RNF5Q99942 180 aa2.99□□□□□ -1.93
SNRNP40-205ENST00000486941 NABP2Q9BQ15 211 aa2.99□□□□□ -1.93
SNRNP40-205ENST00000486941 MRPL20Q9BYC9 149 aaKnown RBP2.99□□□□□ -1.93
SNRNP40-205ENST00000486941 ALX4Q9H161 411 aaPredicted RBP2.99□□□□□ -1.93
SNRNP40-205ENST00000486941 SLA2Q9H6Q3 261 aa2.99□□□□□ -1.93
SNRNP40-205ENST00000486941 TAF9BQ9HBM6 251 aa2.99□□□□□ -1.93
SNRNP40-205ENST00000486941 AMBNQ9NP70 447 aa2.99□□□□□ -1.93
SNRNP40-205ENST00000486941 FGF20Q9NP95 211 aaPredicted RBP2.99□□□□□ -1.93
SNRNP40-205ENST00000486941 PARP11Q9NR21 331 aa2.99□□□□□ -1.93
SNRNP40-205ENST00000486941 KCNIP1Q9NZI2 227 aa2.99□□□□□ -1.93
SNRNP40-205ENST00000486941 AASSQ9UDR5 926 aa2.99□□□□□ -1.93
SNRNP40-205ENST00000486941 JPT1Q9UK76 154 aa2.99□□□□□ -1.93
SNRNP40-205ENST00000486941 RNF150Q9ULK6 438 aa2.99□□□□□ -1.93
SNRNP40-205ENST00000486941 STUB1Q9UNE7 303 aa2.99□□□□□ -1.93
SNRNP40-205ENST00000486941 FOXA2Q9Y261 457 aaPredicted RBP2.99□□□□□ -1.93
SNRNP40-205ENST00000486941 RPL36Q9Y3U8 105 aaKnown RBP2.99□□□□□ -1.93
SNRNP40-205ENST00000486941 PEX16Q9Y5Y5 336 aa2.99□□□□□ -1.93
SNRNP40-205ENST00000486941 TRBV5-5A0A0J9YX44 114 aa2.98□□□□□ -1.93
SNRNP40-205ENST00000486941 OR5H14A6NHG9 310 aa2.98□□□□□ -1.93
SNRNP40-205ENST00000486941 H0Y980 276 aa2.98□□□□□ -1.93
SNRNP40-205ENST00000486941 FCN1O00602 326 aa2.98□□□□□ -1.93
SNRNP40-205ENST00000486941 EI24O14681 340 aa2.98□□□□□ -1.93
SNRNP40-205ENST00000486941 RAB29O14966 203 aa2.98□□□□□ -1.93
SNRNP40-205ENST00000486941 RBBP9O75884 186 aa2.98□□□□□ -1.93
SNRNP40-205ENST00000486941 ATP5HO75947 161 aa2.98□□□□□ -1.93
SNRNP40-205ENST00000486941 IFNA6P05013 189 aa2.98□□□□□ -1.93
SNRNP40-205ENST00000486941 TFAP2AP05549 437 aa2.98□□□□□ -1.93
SNRNP40-205ENST00000486941 LIMS3P0CW19 117 aa2.98□□□□□ -1.93
SNRNP40-205ENST00000486941 LIMS4P0CW20 117 aa2.98□□□□□ -1.93
SNRNP40-205ENST00000486941 SAA2P0DJI9 122 aaPredicted RBP2.98□□□□□ -1.93
SNRNP40-205ENST00000486941 ZP3P21754 424 aa2.98□□□□□ -1.93
SNRNP40-205ENST00000486941 DCKP27707 260 aa2.98□□□□□ -1.93
SNRNP40-205ENST00000486941 CD40LGP29965 261 aa2.98□□□□□ -1.93
SNRNP40-205ENST00000486941 MC5RP33032 325 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms