RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 RAG2P55895 527 aa10.19□□□□□ -0.78
HDAC6-229ENST00000486665 DHRS2Q13268 280 aa10.19□□□□□ -0.78
HDAC6-229ENST00000486665 TRIM16LQ309B1 348 aa10.19□□□□□ -0.78
HDAC6-229ENST00000486665 C4orf46Q504U0 113 aa10.19□□□□□ -0.78
HDAC6-229ENST00000486665 RBMS3Q6XE24 437 aaKnown RBP10.19□□□□□ -0.78
HDAC6-229ENST00000486665 LYG2Q86SG7 212 aa10.19□□□□□ -0.78
HDAC6-229ENST00000486665 SELENOHQ8IZQ5 122 aaKnown RBP10.19□□□□□ -0.78
HDAC6-229ENST00000486665 VKORC1L1Q8N0U8 176 aa10.19□□□□□ -0.78
HDAC6-229ENST00000486665 OR4C13Q8NGP0 309 aa10.19□□□□□ -0.78
HDAC6-229ENST00000486665 CD300LFQ8TDQ1 290 aa10.19□□□□□ -0.78
HDAC6-229ENST00000486665 CASTOR1Q8WTX7 329 aa10.19□□□□□ -0.78
HDAC6-229ENST00000486665 SSMEM1Q8WWF3 244 aa10.19□□□□□ -0.78
HDAC6-229ENST00000486665 TMEM222Q9H0R3 208 aa10.19□□□□□ -0.78
HDAC6-229ENST00000486665 FAM212BQ9NTI7 297 aaPredicted RBP10.19□□□□□ -0.78
HDAC6-229ENST00000486665 A0A0B4J293 547 aa10.18□□□□□ -0.78
HDAC6-229ENST00000486665 SHOXO15266 292 aa10.18□□□□□ -0.78
HDAC6-229ENST00000486665 KCNAB3O43448 404 aa10.18□□□□□ -0.78
HDAC6-229ENST00000486665 B3GALNT1O75752 331 aa10.18□□□□□ -0.78
HDAC6-229ENST00000486665 CDS2O95674 445 aa10.18□□□□□ -0.78
HDAC6-229ENST00000486665 SERPINE2P07093 398 aa10.18□□□□□ -0.78
HDAC6-229ENST00000486665 CBX3Q13185 183 aa10.18□□□□□ -0.78
HDAC6-229ENST00000486665 PSG5Q15238 335 aa10.18□□□□□ -0.78
HDAC6-229ENST00000486665 DHRS7BQ6IAN0 325 aaPredicted RBP10.18□□□□□ -0.78
HDAC6-229ENST00000486665 LIN54Q6MZP7 749 aa10.18□□□□□ -0.78
HDAC6-229ENST00000486665 LIAT1Q6ZQX7 453 aa10.18□□□□□ -0.78
HDAC6-229ENST00000486665 NPBQ8NG41 125 aa10.18□□□□□ -0.78
HDAC6-229ENST00000486665 OR5R1Q8NH85 324 aa10.18□□□□□ -0.78
HDAC6-229ENST00000486665 OSR1Q8TAX0 266 aaPredicted RBP10.18□□□□□ -0.78
HDAC6-229ENST00000486665 ZNF418Q8TF45 676 aaPredicted RBP10.18□□□□□ -0.78
HDAC6-229ENST00000486665 HARBI1Q96MB7 349 aa10.18□□□□□ -0.78
HDAC6-229ENST00000486665 TMEM56Q96MV1 263 aa10.18□□□□□ -0.78
HDAC6-229ENST00000486665 RBM14Q96PK6 669 aaKnown RBP10.18□□□□□ -0.78
HDAC6-229ENST00000486665 RNF5Q99942 180 aa10.18□□□□□ -0.78
HDAC6-229ENST00000486665 CHIAQ9BZP6 476 aa10.18□□□□□ -0.78
HDAC6-229ENST00000486665 PLEKHA2Q9HB19 425 aa10.18□□□□□ -0.78
HDAC6-229ENST00000486665 TMEM56-RWDD3S4R434 201 aa10.18□□□□□ -0.78
HDAC6-229ENST00000486665 DNAJC9-AS1A6NH13 148 aa10.17□□□□□ -0.78
HDAC6-229ENST00000486665 CHST1O43916 411 aa10.17□□□□□ -0.78
HDAC6-229ENST00000486665 OR2F2O95006 317 aa10.17□□□□□ -0.78
HDAC6-229ENST00000486665 DHFRP00374 187 aa10.17□□□□□ -0.78
HDAC6-229ENST00000486665 KRASP01116 189 aa10.17□□□□□ -0.78
HDAC6-229ENST00000486665 IGKV1-5P01602 117 aa10.17□□□□□ -0.78
HDAC6-229ENST00000486665 HLA-AP01891 365 aaKnown RBP10.17□□□□□ -0.78
HDAC6-229ENST00000486665 CRYGBP07316 175 aa10.17□□□□□ -0.78
HDAC6-229ENST00000486665 ANXA3P12429 323 aa10.17□□□□□ -0.78
HDAC6-229ENST00000486665 G6PCP35575 357 aa10.17□□□□□ -0.78
HDAC6-229ENST00000486665 LGALS7P47929 136 aa10.17□□□□□ -0.78
HDAC6-229ENST00000486665 TMEM268Q5VZI3 342 aa10.17□□□□□ -0.78
HDAC6-229ENST00000486665 C11orf88Q6PI97 169 aa10.17□□□□□ -0.78
HDAC6-229ENST00000486665 TMEM86BQ8N661 226 aa10.17□□□□□ -0.78
HDAC6-229ENST00000486665 ZNF431Q8TF32 576 aaPredicted RBP10.17□□□□□ -0.78
HDAC6-229ENST00000486665 R3HDM4Q96D70 268 aa10.17□□□□□ -0.78
HDAC6-229ENST00000486665 SLC25A33Q9BSK2 321 aa10.17□□□□□ -0.78
HDAC6-229ENST00000486665 VPREB3Q9UKI3 123 aa10.17□□□□□ -0.78
HDAC6-229ENST00000486665 POMT1Q9Y6A1 747 aa10.17□□□□□ -0.78
HDAC6-229ENST00000486665 A0A0A6YYJ9 748 aa10.16□□□□□ -0.78
HDAC6-229ENST00000486665 BTBD17A6NE02 478 aa10.16□□□□□ -0.78
HDAC6-229ENST00000486665 SH2D7A6NKC9 451 aaPredicted RBP10.16□□□□□ -0.78
HDAC6-229ENST00000486665 NCBP2LA6PVI3 153 aaKnown RBP10.16□□□□□ -0.78
HDAC6-229ENST00000486665 NBR2O15453 112 aa10.16□□□□□ -0.78
HDAC6-229ENST00000486665 SLC25A17O43808 307 aa10.16□□□□□ -0.78
HDAC6-229ENST00000486665 DUS4LO95620 317 aaKnown RBP10.16□□□□□ -0.78
HDAC6-229ENST00000486665 AMY1AP04745 511 aa10.16□□□□□ -0.78
HDAC6-229ENST00000486665 NQO2P16083 231 aa10.16□□□□□ -0.78
HDAC6-229ENST00000486665 HILS1P60008 231 aa10.16□□□□□ -0.78
HDAC6-229ENST00000486665 MMDQ15546 238 aa10.16□□□□□ -0.78
HDAC6-229ENST00000486665 POU2AF1Q16633 256 aa10.16□□□□□ -0.78
HDAC6-229ENST00000486665 MRGPRG-AS1Q2M3A8 158 aa10.16□□□□□ -0.78
HDAC6-229ENST00000486665 SSX9Q7RTT3 188 aa10.16□□□□□ -0.78
HDAC6-229ENST00000486665 LYZL2Q7Z4W2 148 aa10.16□□□□□ -0.78
HDAC6-229ENST00000486665 ZNF695Q8IW36 515 aa10.16□□□□□ -0.78
HDAC6-229ENST00000486665 LGI3Q8N145 548 aa10.16□□□□□ -0.78
HDAC6-229ENST00000486665 Q8N9W7 124 aa10.16□□□□□ -0.78
HDAC6-229ENST00000486665 MINDY2Q8NBR6 621 aa10.16□□□□□ -0.78
HDAC6-229ENST00000486665 MITD1Q8WV92 249 aa10.16□□□□□ -0.78
HDAC6-229ENST00000486665 SEC22AQ96IW7 307 aa10.16□□□□□ -0.78
HDAC6-229ENST00000486665 TSNAXQ99598 290 aaKnown RBP10.16□□□□□ -0.78
HDAC6-229ENST00000486665 FBXL15Q9H469 300 aa10.16□□□□□ -0.78
HDAC6-229ENST00000486665 TPSG1Q9NRR2 321 aa10.16□□□□□ -0.78
HDAC6-229ENST00000486665 COMMD9Q9P000 198 aa10.16□□□□□ -0.78
HDAC6-229ENST00000486665 PITPNC1Q9UKF7 332 aa10.16□□□□□ -0.78
HDAC6-229ENST00000486665 ALG5Q9Y673 324 aa10.16□□□□□ -0.78
HDAC6-229ENST00000486665 TRAV3A0A0B4J244 114 aa10.15□□□□□ -0.78
HDAC6-229ENST00000486665 A0A0G2JRQ6 117 aa10.15□□□□□ -0.78
HDAC6-229ENST00000486665 FCN1O00602 326 aa10.15□□□□□ -0.78
HDAC6-229ENST00000486665 RRHO14718 337 aa10.15□□□□□ -0.78
HDAC6-229ENST00000486665 PRAF2O60831 178 aa10.15□□□□□ -0.78
HDAC6-229ENST00000486665 NDUFA3O95167 84 aa10.15□□□□□ -0.78
HDAC6-229ENST00000486665 HRASP01112 189 aa10.15□□□□□ -0.78
HDAC6-229ENST00000486665 IL6RP08887 468 aaPredicted RBP10.15□□□□□ -0.78
HDAC6-229ENST00000486665 P0C879 139 aa10.15□□□□□ -0.78
HDAC6-229ENST00000486665 SAA1P0DJI8 122 aaPredicted RBP10.15□□□□□ -0.78
HDAC6-229ENST00000486665 COMPP49747 757 aaPredicted RBP10.15□□□□□ -0.78
HDAC6-229ENST00000486665 UBE2KP61086 200 aa10.15□□□□□ -0.78
HDAC6-229ENST00000486665 TATDN3Q17R31 274 aa10.15□□□□□ -0.78
HDAC6-229ENST00000486665 IZUMO4Q1ZYL8 232 aa10.15□□□□□ -0.78
HDAC6-229ENST00000486665 OR4A47Q6IF82 309 aa10.15□□□□□ -0.78
HDAC6-229ENST00000486665 PUSL1Q8N0Z8 303 aaKnown RBP10.15□□□□□ -0.78
HDAC6-229ENST00000486665 LRTM2Q8N967 370 aa10.15□□□□□ -0.78
HDAC6-229ENST00000486665 OR8H1Q8NGG4 311 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms