RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 TMEM140Q9NV12 185 aa16.73■□□□□ 0.27
HPS3-206ENST00000486530 KAAG1Q9UBP8 84 aa16.73■□□□□ 0.27
HPS3-206ENST00000486530 PKDREJQ9NTG1 2253 aa16.72■□□□□ 0.27
HPS3-206ENST00000486530 UBE2L5PA0A1B0GUS4 154 aa16.72■□□□□ 0.27
HPS3-206ENST00000486530 PMS2P5A8MQ11 134 aa16.72■□□□□ 0.27
HPS3-206ENST00000486530 GPR37O15354 613 aa16.72■□□□□ 0.27
HPS3-206ENST00000486530 PLAUP00749 431 aa16.72■□□□□ 0.27
HPS3-206ENST00000486530 IFNA17P01571 189 aa16.72■□□□□ 0.27
HPS3-206ENST00000486530 HBE1P02100 147 aa16.72■□□□□ 0.27
HPS3-206ENST00000486530 PPT1P50897 306 aa16.72■□□□□ 0.27
HPS3-206ENST00000486530 RAB2AP61019 212 aa16.72■□□□□ 0.27
HPS3-206ENST00000486530 PDLIM3Q53GG5 364 aaPredicted RBP16.72■□□□□ 0.27
HPS3-206ENST00000486530 OR10P1Q8NGE3 313 aa16.72■□□□□ 0.27
HPS3-206ENST00000486530 TMEM147Q9BVK8 224 aa16.72■□□□□ 0.27
HPS3-206ENST00000486530 SMDT1Q9H4I9 107 aa16.72■□□□□ 0.27
HPS3-206ENST00000486530 NDUFA2O43678 99 aa16.71■□□□□ 0.27
HPS3-206ENST00000486530 FCN3O75636 299 aa16.71■□□□□ 0.27
HPS3-206ENST00000486530 ZNF383Q8NA42 475 aa16.71■□□□□ 0.27
HPS3-206ENST00000486530 TAF15Q92804 592 aaKnown RBP eCLIP16.71■□□□□ 0.27
HPS3-206ENST00000486530 CLCC1Q96S66 551 aa16.71■□□□□ 0.27
HPS3-206ENST00000486530 KIAA1456Q9P272 454 aa16.71■□□□□ 0.27
HPS3-206ENST00000486530 TIMM9Q9Y5J7 89 aa16.71■□□□□ 0.27
HPS3-206ENST00000486530 A0A1B0GV50 99 aa16.71■□□□□ 0.27
HPS3-206ENST00000486530 TSPAN4O14817 238 aa16.71■□□□□ 0.27
HPS3-206ENST00000486530 RELBQ01201 579 aa16.71■□□□□ 0.27
HPS3-206ENST00000486530 TAGLNQ01995 201 aaKnown RBP16.71■□□□□ 0.27
HPS3-206ENST00000486530 SPINK9Q5DT21 86 aa16.71■□□□□ 0.27
HPS3-206ENST00000486530 TMEM200BQ69YZ2 307 aa16.71■□□□□ 0.27
HPS3-206ENST00000486530 SP5Q6BEB4 398 aaPredicted RBP16.71■□□□□ 0.27
HPS3-206ENST00000486530 LYPD2Q6UXB3 125 aa16.71■□□□□ 0.27
HPS3-206ENST00000486530 VKORC1L1Q8N0U8 176 aa16.71■□□□□ 0.27
HPS3-206ENST00000486530 MUC15Q8N387 334 aa16.71■□□□□ 0.27
HPS3-206ENST00000486530 CA5BP1Q8WTZ4 195 aa16.71■□□□□ 0.27
HPS3-206ENST00000486530 FAM74A7A6NL05 159 aa16.7■□□□□ 0.26
HPS3-206ENST00000486530 SIAH2O43255 324 aa16.7■□□□□ 0.26
HPS3-206ENST00000486530 F12P00748 615 aaPredicted RBP16.7■□□□□ 0.26
HPS3-206ENST00000486530 HFEQ30201 348 aa16.7■□□□□ 0.26
HPS3-206ENST00000486530 ZNF672Q499Z4 452 aaPredicted RBP16.7■□□□□ 0.26
HPS3-206ENST00000486530 FAM74A3Q4VXF1 159 aa16.7■□□□□ 0.26
HPS3-206ENST00000486530 ZNF429Q86V71 674 aa16.7■□□□□ 0.26
HPS3-206ENST00000486530 H1FXQ92522 213 aaKnown RBP16.7■□□□□ 0.26
HPS3-206ENST00000486530 RAB39BQ96DA2 213 aa16.7■□□□□ 0.26
HPS3-206ENST00000486530 RBMXL1Q96E39 390 aaKnown RBP16.7■□□□□ 0.26
HPS3-206ENST00000486530 CTSZQ9UBR2 303 aa16.7■□□□□ 0.26
HPS3-206ENST00000486530 ADGRG4Q8IZF6 3080 aa16.7■□□□□ 0.26
HPS3-206ENST00000486530 DVL1O14640 695 aa16.69■□□□□ 0.26
HPS3-206ENST00000486530 NUPL2O15504 423 aaKnown RBP16.69■□□□□ 0.26
HPS3-206ENST00000486530 ARG1P05089 322 aa16.69■□□□□ 0.26
HPS3-206ENST00000486530 CCL3L1P16619 93 aa16.69■□□□□ 0.26
HPS3-206ENST00000486530 GNB2P62879 340 aa16.69■□□□□ 0.26
HPS3-206ENST00000486530 RPP30P78346 268 aaKnown RBP16.69■□□□□ 0.26
HPS3-206ENST00000486530 SFT2D1Q8WV19 159 aa16.69■□□□□ 0.26
HPS3-206ENST00000486530 TET2Q6N021 2002 aaPredicted RBP16.69■□□□□ 0.26
HPS3-206ENST00000486530 TRAV1-1A0A0B4J248 108 aa16.69■□□□□ 0.26
HPS3-206ENST00000486530 POU2AF1Q16633 256 aa16.69■□□□□ 0.26
HPS3-206ENST00000486530 DHRS7BQ6IAN0 325 aaPredicted RBP16.69■□□□□ 0.26
HPS3-206ENST00000486530 COL6A6A6NMZ7 2263 aa16.68■□□□□ 0.26
HPS3-206ENST00000486530 RBFOX3A6NFN3 312 aa16.68■□□□□ 0.26
HPS3-206ENST00000486530 C15orf61A6NNL5 157 aa16.68■□□□□ 0.26
HPS3-206ENST00000486530 C15orf62A8K5M9 175 aa16.68■□□□□ 0.26
HPS3-206ENST00000486530 HRASP01112 189 aa16.68■□□□□ 0.26
HPS3-206ENST00000486530 NPBWR1P48145 328 aa16.68■□□□□ 0.26
HPS3-206ENST00000486530 CCL20P78556 96 aa16.68■□□□□ 0.26
HPS3-206ENST00000486530 VWC2Q2TAL6 325 aa16.68■□□□□ 0.26
HPS3-206ENST00000486530 ZNF833PQ6ZTB9 187 aa16.68■□□□□ 0.26
HPS3-206ENST00000486530 CENPVQ7Z7K6 275 aaPredicted RBP16.68■□□□□ 0.26
HPS3-206ENST00000486530 RHOVQ96L33 236 aa16.68■□□□□ 0.26
HPS3-206ENST00000486530 SLC35B3Q9H1N7 401 aa16.68■□□□□ 0.26
HPS3-206ENST00000486530 RPRMQ9NS64 109 aa16.68■□□□□ 0.26
HPS3-206ENST00000486530 LOXP28300 417 aaPredicted RBP16.67■□□□□ 0.26
HPS3-206ENST00000486530 TFF3Q07654 80 aa16.67■□□□□ 0.26
HPS3-206ENST00000486530 RTL8BQ17RB0 113 aa16.67■□□□□ 0.26
HPS3-206ENST00000486530 TMEM41BQ5BJD5 291 aa16.67■□□□□ 0.26
HPS3-206ENST00000486530 OR4A47Q6IF82 309 aa16.67■□□□□ 0.26
HPS3-206ENST00000486530 RELNP78509 3460 aa16.67■□□□□ 0.26
HPS3-206ENST00000486530 NBASA2RRP1 2371 aa16.67■□□□□ 0.26
HPS3-206ENST00000486530 ANKHD1Q8IWZ3 2542 aaKnown RBP16.67■□□□□ 0.26
HPS3-206ENST00000486530 TRAV3A0A0B4J244 114 aa16.67■□□□□ 0.26
HPS3-206ENST00000486530 CT45A6P0DMU7 189 aa16.67■□□□□ 0.26
HPS3-206ENST00000486530 CT45A5P0DMU8 189 aa16.67■□□□□ 0.26
HPS3-206ENST00000486530 CT45A7P0DMV0 189 aa16.67■□□□□ 0.26
HPS3-206ENST00000486530 CLRN3Q8NCR9 226 aa16.67■□□□□ 0.26
HPS3-206ENST00000486530 TMEM204Q9BSN7 226 aa16.67■□□□□ 0.26
HPS3-206ENST00000486530 FOXA2Q9Y261 457 aaPredicted RBP16.67■□□□□ 0.26
HPS3-206ENST00000486530 VDAC2P45880 294 aaPredicted RBP16.66■□□□□ 0.26
HPS3-206ENST00000486530 PPOXP50336 477 aa16.66■□□□□ 0.26
HPS3-206ENST00000486530 C8orf31Q8N9H6 132 aa16.66■□□□□ 0.26
HPS3-206ENST00000486530 C17orf50Q8WW18 174 aa16.66■□□□□ 0.26
HPS3-206ENST00000486530 SLC35D1Q9NTN3 355 aa16.66■□□□□ 0.26
HPS3-206ENST00000486530 TCF19Q9Y242 345 aa16.66■□□□□ 0.26
HPS3-206ENST00000486530 FSTL3O95633 263 aa16.65■□□□□ 0.26
HPS3-206ENST00000486530 FGF7P21781 194 aa16.65■□□□□ 0.26
HPS3-206ENST00000486530 ERVFRD-1P60508 538 aa16.65■□□□□ 0.26
HPS3-206ENST00000486530 MBD3L1Q8WWY6 194 aa16.65■□□□□ 0.26
HPS3-206ENST00000486530 RARRES2Q99969 163 aa16.65■□□□□ 0.26
HPS3-206ENST00000486530 VSIRQ9H7M9 311 aa16.65■□□□□ 0.26
HPS3-206ENST00000486530 HEYLQ9NQ87 328 aaPredicted RBP16.65■□□□□ 0.26
HPS3-206ENST00000486530 TMEM14BQ9NUH8 114 aa16.65■□□□□ 0.26
HPS3-206ENST00000486530 TMEM155Q4W5P6 130 aa16.65■□□□□ 0.26
HPS3-206ENST00000486530 FAM71F2Q6NXP2 309 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms