RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 VCX3BQ9H321 246 aa1.09□□□□□ -2.23
LTN1-206ENST00000486427 RBM7Q9Y580 266 aaKnown RBP1.09□□□□□ -2.23
LTN1-206ENST00000486427 MED13Q9UHV7 2174 aa1.08□□□□□ -2.24
LTN1-206ENST00000486427 NAV1Q8NEY1 1877 aa1.08□□□□□ -2.24
LTN1-206ENST00000486427 ITGB1BP1O14713 200 aa1.08□□□□□ -2.24
LTN1-206ENST00000486427 HLA-DRAP01903 254 aa1.08□□□□□ -2.24
LTN1-206ENST00000486427 UGT2B7P16662 529 aa1.08□□□□□ -2.24
LTN1-206ENST00000486427 DDTP30046 118 aa1.08□□□□□ -2.24
LTN1-206ENST00000486427 CD151P48509 253 aa1.08□□□□□ -2.24
LTN1-206ENST00000486427 TAS2R20P59543 309 aa1.08□□□□□ -2.24
LTN1-206ENST00000486427 SAPCD1Q5SSQ6 148 aa1.08□□□□□ -2.24
LTN1-206ENST00000486427 LYZL1Q6UWQ5 148 aa1.08□□□□□ -2.24
LTN1-206ENST00000486427 NAA40Q86UY6 237 aa1.08□□□□□ -2.24
LTN1-206ENST00000486427 OR8B12Q8NGG6 310 aa1.08□□□□□ -2.24
LTN1-206ENST00000486427 C12orf43Q96C57 262 aaKnown RBP1.08□□□□□ -2.24
LTN1-206ENST00000486427 KCTD7Q96MP8 289 aa1.08□□□□□ -2.24
LTN1-206ENST00000486427 UPF3BQ9BZI7 483 aaKnown RBP1.08□□□□□ -2.24
LTN1-206ENST00000486427 PLEKHJ1Q9NW61 149 aa1.08□□□□□ -2.24
LTN1-206ENST00000486427 KRT75O95678 551 aa1.07□□□□□ -2.24
LTN1-206ENST00000486427 CA5AP35218 305 aa1.07□□□□□ -2.24
LTN1-206ENST00000486427 CCR2P41597 374 aa1.07□□□□□ -2.24
LTN1-206ENST00000486427 MAGEA12P43365 314 aa1.07□□□□□ -2.24
LTN1-206ENST00000486427 FXYD7P58549 80 aa1.07□□□□□ -2.24
LTN1-206ENST00000486427 TMEM42Q69YG0 159 aa1.07□□□□□ -2.24
LTN1-206ENST00000486427 SBSNQ6UWP8 590 aa1.07□□□□□ -2.24
LTN1-206ENST00000486427 Q8N402 240 aa1.07□□□□□ -2.24
LTN1-206ENST00000486427 TMEM251Q8N6I4 163 aa1.07□□□□□ -2.24
LTN1-206ENST00000486427 UBL4BQ8N7F7 174 aa1.07□□□□□ -2.24
LTN1-206ENST00000486427 HAVCR2Q8TDQ0 301 aa1.07□□□□□ -2.24
LTN1-206ENST00000486427 RAB2BQ8WUD1 216 aa1.07□□□□□ -2.24
LTN1-206ENST00000486427 HSPB9Q9BQS6 159 aa1.07□□□□□ -2.24
LTN1-206ENST00000486427 CYSTM1Q9H1C7 97 aa1.07□□□□□ -2.24
LTN1-206ENST00000486427 ZNHIT6Q9NWK9 470 aaKnown RBP1.07□□□□□ -2.24
LTN1-206ENST00000486427 CFAP45Q9UL16 551 aa1.07□□□□□ -2.24
LTN1-206ENST00000486427 SIPA1L1O43166 1804 aa1.07□□□□□ -2.24
LTN1-206ENST00000486427 KIF15Q9NS87 1388 aa1.07□□□□□ -2.24
LTN1-206ENST00000486427 NUP160Q12769 1436 aa1.06□□□□□ -2.24
LTN1-206ENST00000486427 A0A1B0GW54 56 aa1.06□□□□□ -2.24
LTN1-206ENST00000486427 GOLGA8KD6RF30 607 aa1.06□□□□□ -2.24
LTN1-206ENST00000486427 GOLGA8MH3BSY2 632 aa1.06□□□□□ -2.24
LTN1-206ENST00000486427 COX7A2LO14548 114 aa1.06□□□□□ -2.24
LTN1-206ENST00000486427 KLRC4O43908 158 aa1.06□□□□□ -2.24
LTN1-206ENST00000486427 ZNF737O75373 536 aa1.06□□□□□ -2.24
LTN1-206ENST00000486427 CD40LGP29965 261 aa1.06□□□□□ -2.24
LTN1-206ENST00000486427 TPI1P60174 286 aa1.06□□□□□ -2.24
LTN1-206ENST00000486427 MED21Q13503 144 aa1.06□□□□□ -2.24
LTN1-206ENST00000486427 LRRC75BQ2VPJ9 315 aa1.06□□□□□ -2.24
LTN1-206ENST00000486427 TMEM155Q4W5P6 130 aa1.06□□□□□ -2.24
LTN1-206ENST00000486427 PDPK2PQ6A1A2 396 aa1.06□□□□□ -2.24
LTN1-206ENST00000486427 RASSF6Q6ZTQ3 369 aa1.06□□□□□ -2.24
LTN1-206ENST00000486427 KTN1-AS1Q86SY8 53 aa1.06□□□□□ -2.24
LTN1-206ENST00000486427 JOSD2Q8TAC2 188 aa1.06□□□□□ -2.24
LTN1-206ENST00000486427 GNPNAT1Q96EK6 184 aaPredicted RBP1.06□□□□□ -2.24
LTN1-206ENST00000486427 HRASLSQ9HDD0 168 aa1.06□□□□□ -2.24
LTN1-206ENST00000486427 C8orf4Q9NR00 106 aa1.06□□□□□ -2.24
LTN1-206ENST00000486427 NUMA1Q14980 2115 aa1.06□□□□□ -2.24
LTN1-206ENST00000486427 IGHV1-18A0A0C4DH31 117 aa1.05□□□□□ -2.24
LTN1-206ENST00000486427 A0A0J9YW62 118 aa1.05□□□□□ -2.24
LTN1-206ENST00000486427 C8orf88P0DMB2 117 aa1.05□□□□□ -2.24
LTN1-206ENST00000486427 GPX2P18283 190 aa1.05□□□□□ -2.24
LTN1-206ENST00000486427 PSMB8P28062 276 aa1.05□□□□□ -2.24
LTN1-206ENST00000486427 ALDH3A1P30838 453 aa1.05□□□□□ -2.24
LTN1-206ENST00000486427 CDC34P49427 236 aaPredicted RBP1.05□□□□□ -2.24
LTN1-206ENST00000486427 EMP1P54849 157 aa1.05□□□□□ -2.24
LTN1-206ENST00000486427 TNFAIP8L2Q6P589 184 aaPredicted RBP1.05□□□□□ -2.24
LTN1-206ENST00000486427 OR2T27Q8NH04 317 aa1.05□□□□□ -2.24
LTN1-206ENST00000486427 RNF133Q8WVZ7 376 aa1.05□□□□□ -2.24
LTN1-206ENST00000486427 SLC7A6Q92536 515 aa1.05□□□□□ -2.24
LTN1-206ENST00000486427 IMMP2LQ96T52 175 aa1.05□□□□□ -2.24
LTN1-206ENST00000486427 DOHHQ9BU89 302 aa1.05□□□□□ -2.24
LTN1-206ENST00000486427 COQ4Q9Y3A0 265 aa1.05□□□□□ -2.24
LTN1-206ENST00000486427 KIAA2026Q5HYC2 2103 aa1.04□□□□□ -2.24
LTN1-206ENST00000486427 TRAV7A0A075B6U4 112 aa1.04□□□□□ -2.24
LTN1-206ENST00000486427 CIAO1O76071 339 aa1.04□□□□□ -2.24
LTN1-206ENST00000486427 SERPINA7P05543 415 aa1.04□□□□□ -2.24
LTN1-206ENST00000486427 IL3P08700 152 aa1.04□□□□□ -2.24
LTN1-206ENST00000486427 LGALS1P09382 135 aaKnown RBP1.04□□□□□ -2.24
LTN1-206ENST00000486427 CCL5P13501 91 aa1.04□□□□□ -2.24
LTN1-206ENST00000486427 CCL1P22362 96 aa1.04□□□□□ -2.24
LTN1-206ENST00000486427 SLCO1A2P46721 670 aa1.04□□□□□ -2.24
LTN1-206ENST00000486427 AP1S1P61966 158 aa1.04□□□□□ -2.24
LTN1-206ENST00000486427 ACSM3Q53FZ2 586 aa1.04□□□□□ -2.24
LTN1-206ENST00000486427 C1orf194Q5T5A4 169 aa1.04□□□□□ -2.24
LTN1-206ENST00000486427 FAM78BQ5VT40 261 aa1.04□□□□□ -2.24
LTN1-206ENST00000486427 CST9Q5W186 159 aa1.04□□□□□ -2.24
LTN1-206ENST00000486427 FAM9CQ8IZT9 166 aa1.04□□□□□ -2.24
LTN1-206ENST00000486427 DYNAPQ8N1N2 210 aa1.04□□□□□ -2.24
LTN1-206ENST00000486427 UMODL1-AS1Q8N2C9 162 aa1.04□□□□□ -2.24
LTN1-206ENST00000486427 TMEM156Q8N614 296 aa1.04□□□□□ -2.24
LTN1-206ENST00000486427 TMEM161BQ8NDZ6 487 aa1.04□□□□□ -2.24
LTN1-206ENST00000486427 SGMS2Q8NHU3 365 aa1.04□□□□□ -2.24
LTN1-206ENST00000486427 RETNLBQ9BQ08 111 aa1.04□□□□□ -2.24
LTN1-206ENST00000486427 ANAPC10Q9UM13 185 aa1.04□□□□□ -2.24
LTN1-206ENST00000486427 PRELID1Q9Y255 219 aa1.04□□□□□ -2.24
LTN1-206ENST00000486427 POLR1DQ9Y2S0 133 aa1.04□□□□□ -2.24
LTN1-206ENST00000486427 CCDC88CQ9P219 2028 aa1.04□□□□□ -2.24
LTN1-206ENST00000486427 PIK3R4Q99570 1358 aa1.04□□□□□ -2.24
LTN1-206ENST00000486427 SDK1Q7Z5N4 2213 aa1.03□□□□□ -2.24
LTN1-206ENST00000486427 MEIKINA0A087WXM9 373 aa1.03□□□□□ -2.24
LTN1-206ENST00000486427 C1orf232A0A0U1RR37 186 aa1.03□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms