RNA–Protein interactions for RNA: ENST00000486204.5

SSR4-211, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 658 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-211ENST00000486204 PRELID3BQ9Y3B1 194 aa10.13□□□□□ -0.79
SSR4-211ENST00000486204 TENM3Q9P273 2699 aa10.13□□□□□ -0.79
SSR4-211ENST00000486204 RYR2Q92736 4967 aa10.13□□□□□ -0.79
SSR4-211ENST00000486204 ANKRD20A5PA0PJZ0 165 aa10.12□□□□□ -0.79
SSR4-211ENST00000486204 PSMB11A5LHX3 300 aa10.12□□□□□ -0.79
SSR4-211ENST00000486204 SHOXO15266 292 aa10.12□□□□□ -0.79
SSR4-211ENST00000486204 RAMP3O60896 148 aa10.12□□□□□ -0.79
SSR4-211ENST00000486204 RAB3DO95716 219 aa10.12□□□□□ -0.79
SSR4-211ENST00000486204 CA2P00918 260 aa10.12□□□□□ -0.79
SSR4-211ENST00000486204 PTBP1P26599 531 aaKnown RBP eCLIP10.12□□□□□ -0.79
SSR4-211ENST00000486204 CRIP2P52943 208 aaPredicted RBP10.12□□□□□ -0.79
SSR4-211ENST00000486204 UCP3P55916 312 aa10.12□□□□□ -0.79
SSR4-211ENST00000486204 TSPAN5P62079 268 aa10.12□□□□□ -0.79
SSR4-211ENST00000486204 CX3CL1P78423 397 aa10.12□□□□□ -0.79
SSR4-211ENST00000486204 CD83Q01151 205 aa10.12□□□□□ -0.79
SSR4-211ENST00000486204 CBX3Q13185 183 aa10.12□□□□□ -0.79
SSR4-211ENST00000486204 CENPVQ7Z7K6 275 aaPredicted RBP10.12□□□□□ -0.79
SSR4-211ENST00000486204 ZNF329Q86UD4 541 aa10.12□□□□□ -0.79
SSR4-211ENST00000486204 PPP1R27Q86WC6 154 aa10.12□□□□□ -0.79
SSR4-211ENST00000486204 OR4C16Q8NGL9 310 aa10.12□□□□□ -0.79
SSR4-211ENST00000486204 OR4S2Q8NH73 311 aa10.12□□□□□ -0.79
SSR4-211ENST00000486204 BORCS5Q969J3 196 aa10.12□□□□□ -0.79
SSR4-211ENST00000486204 CITED2Q99967 270 aaPredicted RBP10.12□□□□□ -0.79
SSR4-211ENST00000486204 RSRP1Q9BUV0 290 aa10.12□□□□□ -0.79
SSR4-211ENST00000486204 GPR31O00270 319 aa10.11□□□□□ -0.79
SSR4-211ENST00000486204 ARPC1BO15143 372 aaKnown RBP10.11□□□□□ -0.79
SSR4-211ENST00000486204 RBFOX2O43251 390 aaKnown RBP eCLIP10.11□□□□□ -0.79
SSR4-211ENST00000486204 PGLYRP1O75594 196 aaPredicted RBP10.11□□□□□ -0.79
SSR4-211ENST00000486204 RLN1P04808 185 aa10.11□□□□□ -0.79
SSR4-211ENST00000486204 SAA1P0DJI8 122 aaPredicted RBP10.11□□□□□ -0.79
SSR4-211ENST00000486204 EGR2P11161 476 aaPredicted RBP10.11□□□□□ -0.79
SSR4-211ENST00000486204 UBE2KP61086 200 aa10.11□□□□□ -0.79
SSR4-211ENST00000486204 PJVKQ0ZLH3 352 aa10.11□□□□□ -0.79
SSR4-211ENST00000486204 CATR1Q13166 79 aa10.11□□□□□ -0.79
SSR4-211ENST00000486204 PLGLAQ15195 96 aa10.11□□□□□ -0.79
SSR4-211ENST00000486204 OR51H1Q8NH63 302 aa10.11□□□□□ -0.79
SSR4-211ENST00000486204 SRRQ9GZT4 340 aa10.11□□□□□ -0.79
SSR4-211ENST00000486204 PARP11Q9NR21 331 aa10.11□□□□□ -0.79
SSR4-211ENST00000486204 COL7A1Q02388 2944 aa10.11□□□□□ -0.79
SSR4-211ENST00000486204 G3V318 75 aa10.1□□□□□ -0.79
SSR4-211ENST00000486204 IFNA6P05013 189 aa10.1□□□□□ -0.79
SSR4-211ENST00000486204 AKAIN1P0CW23 69 aa10.1□□□□□ -0.79
SSR4-211ENST00000486204 PPIFP30405 207 aaKnown RBP10.1□□□□□ -0.79
SSR4-211ENST00000486204 KIR2DS2P43631 304 aa10.1□□□□□ -0.79
SSR4-211ENST00000486204 PPP5CP53041 499 aa10.1□□□□□ -0.79
SSR4-211ENST00000486204 MEF2DQ14814 521 aa10.1□□□□□ -0.79
SSR4-211ENST00000486204 PHLDA2Q53GA4 152 aa10.1□□□□□ -0.79
SSR4-211ENST00000486204 ZNF562Q6V9R5 426 aa10.1□□□□□ -0.79
SSR4-211ENST00000486204 IDO2Q6ZQW0 420 aa10.1□□□□□ -0.79
SSR4-211ENST00000486204 SLC38A6Q8IZM9 456 aa10.1□□□□□ -0.79
SSR4-211ENST00000486204 SPAG16Q8N0X2 631 aa10.1□□□□□ -0.79
SSR4-211ENST00000486204 TEX45Q8NA69 505 aa10.1□□□□□ -0.79
SSR4-211ENST00000486204 OR4X2Q8NGF9 303 aa10.1□□□□□ -0.79
SSR4-211ENST00000486204 CLCC1Q96S66 551 aa10.1□□□□□ -0.79
SSR4-211ENST00000486204 THAP7Q9BT49 309 aaPredicted RBP10.1□□□□□ -0.79
SSR4-211ENST00000486204 TRAV41A0A0B4J266 112 aa10.09□□□□□ -0.79
SSR4-211ENST00000486204 SOX15O60248 233 aa10.09□□□□□ -0.79
SSR4-211ENST00000486204 IGHG4P01861 327 aa10.09□□□□□ -0.79
SSR4-211ENST00000486204 KLF9Q13886 244 aaPredicted RBP10.09□□□□□ -0.79
SSR4-211ENST00000486204 POU2AF1Q16633 256 aa10.09□□□□□ -0.79
SSR4-211ENST00000486204 VMA21Q3ZAQ7 101 aa10.09□□□□□ -0.79
SSR4-211ENST00000486204 PYDC2Q56P42 97 aa10.09□□□□□ -0.79
SSR4-211ENST00000486204 SPANXN2Q5MJ10 180 aa10.09□□□□□ -0.79
SSR4-211ENST00000486204 LPCAT3Q6P1A2 487 aa10.09□□□□□ -0.79
SSR4-211ENST00000486204 NDUFA11Q86Y39 141 aa10.09□□□□□ -0.79
SSR4-211ENST00000486204 CMTM1Q8IZ96 169 aa10.09□□□□□ -0.79
SSR4-211ENST00000486204 VKORC1L1Q8N0U8 176 aa10.09□□□□□ -0.79
SSR4-211ENST00000486204 PUSL1Q8N0Z8 303 aaKnown RBP10.09□□□□□ -0.79
SSR4-211ENST00000486204 Q8N402 240 aa10.09□□□□□ -0.79
SSR4-211ENST00000486204 RNF152Q8N8N0 203 aa10.09□□□□□ -0.79
SSR4-211ENST00000486204 OR13C8Q8NGS7 320 aa10.09□□□□□ -0.79
SSR4-211ENST00000486204 TERB2Q8NHR7 220 aa10.09□□□□□ -0.79
SSR4-211ENST00000486204 SDHCQ99643 169 aaPredicted RBP10.09□□□□□ -0.79
SSR4-211ENST00000486204 FAM103A1Q9BTL3 118 aaKnown RBP10.09□□□□□ -0.79
SSR4-211ENST00000486204 SLC2A9Q9NRM0 540 aa10.09□□□□□ -0.79
SSR4-211ENST00000486204 SLC2A8Q9NY64 477 aa10.09□□□□□ -0.79
SSR4-211ENST00000486204 NUBP2Q9Y5Y2 271 aa10.09□□□□□ -0.79
SSR4-211ENST00000486204 KBTBD11O94819 623 aa10.08□□□□□ -0.8
SSR4-211ENST00000486204 S1PR2O95136 353 aa10.08□□□□□ -0.8
SSR4-211ENST00000486204 IGLV1-40P01703 118 aa10.08□□□□□ -0.8
SSR4-211ENST00000486204 PI3P19957 117 aa10.08□□□□□ -0.8
SSR4-211ENST00000486204 VDAC1P21796 283 aa10.08□□□□□ -0.8
SSR4-211ENST00000486204 F2RP25116 425 aa10.08□□□□□ -0.8
SSR4-211ENST00000486204 PSMB8P28062 276 aa10.08□□□□□ -0.8
SSR4-211ENST00000486204 RND3P61587 244 aa10.08□□□□□ -0.8
SSR4-211ENST00000486204 SLC35B1P78383 322 aa10.08□□□□□ -0.8
SSR4-211ENST00000486204 PRSS8Q16651 343 aa10.08□□□□□ -0.8
SSR4-211ENST00000486204 CNPY1Q3B7I2 92 aa10.08□□□□□ -0.8
SSR4-211ENST00000486204 SCGB2B2Q4G0G5 96 aa10.08□□□□□ -0.8
SSR4-211ENST00000486204 ZNF585BQ52M93 769 aa10.08□□□□□ -0.8
SSR4-211ENST00000486204 DEFB121Q5J5C9 76 aa10.08□□□□□ -0.8
SSR4-211ENST00000486204 TBC1D26Q86UD7 250 aa10.08□□□□□ -0.8
SSR4-211ENST00000486204 COMMD1Q8N668 190 aa10.08□□□□□ -0.8
SSR4-211ENST00000486204 MINDY2Q8NBR6 621 aa10.08□□□□□ -0.8
SSR4-211ENST00000486204 TMEM167AQ8TBQ9 72 aa10.08□□□□□ -0.8
SSR4-211ENST00000486204 MARCH1Q8TCQ1 289 aa10.08□□□□□ -0.8
SSR4-211ENST00000486204 MYOZ3Q8TDC0 251 aa10.08□□□□□ -0.8
SSR4-211ENST00000486204 ARPC1AQ92747 370 aa10.08□□□□□ -0.8
SSR4-211ENST00000486204 ZNF486Q96H40 463 aaPredicted RBP10.08□□□□□ -0.8
SSR4-211ENST00000486204 RHOVQ96L33 236 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms