RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 VPREB3Q9UKI3 123 aa4.5□□□□□ -1.69
COPS3-208ENST00000486032 TBC1D24Q9ULP9 559 aa4.5□□□□□ -1.69
COPS3-208ENST00000486032 GPR132Q9UNW8 380 aa4.5□□□□□ -1.69
COPS3-208ENST00000486032 GAB2Q9UQC2 676 aa4.5□□□□□ -1.69
COPS3-208ENST00000486032 TCF19Q9Y242 345 aa4.5□□□□□ -1.69
COPS3-208ENST00000486032 WASHC3Q9Y3C0 194 aa4.5□□□□□ -1.69
COPS3-208ENST00000486032 JMJD1CQ15652 2540 aa4.5□□□□□ -1.69
COPS3-208ENST00000486032 MXRA5Q9NR99 2828 aa4.5□□□□□ -1.69
COPS3-208ENST00000486032 C3orf85A0A1B0GTC6 90 aa4.49□□□□□ -1.69
COPS3-208ENST00000486032 FAM90A9PA6NNJ1 464 aa4.49□□□□□ -1.69
COPS3-208ENST00000486032 RNF212BA8MTL3 300 aa4.49□□□□□ -1.69
COPS3-208ENST00000486032 TRIM77I1YAP6 450 aa4.49□□□□□ -1.69
COPS3-208ENST00000486032 MPPED1O15442 326 aa4.49□□□□□ -1.69
COPS3-208ENST00000486032 SLC25A17O43808 307 aa4.49□□□□□ -1.69
COPS3-208ENST00000486032 CHST1O43916 411 aa4.49□□□□□ -1.69
COPS3-208ENST00000486032 GPR137BO60478 399 aa4.49□□□□□ -1.69
COPS3-208ENST00000486032 RAMP3O60896 148 aa4.49□□□□□ -1.69
COPS3-208ENST00000486032 S1PR2O95136 353 aa4.49□□□□□ -1.69
COPS3-208ENST00000486032 NDUFB6O95139 128 aa4.49□□□□□ -1.69
COPS3-208ENST00000486032 IGKV1-16P04430 117 aa4.49□□□□□ -1.69
COPS3-208ENST00000486032 TCRBP04435 133 aa4.49□□□□□ -1.69
COPS3-208ENST00000486032 OR5AC1P0C628 307 aa4.49□□□□□ -1.69
COPS3-208ENST00000486032 RRASP10301 218 aa4.49□□□□□ -1.69
COPS3-208ENST00000486032 ANXA7P20073 488 aaKnown RBP4.49□□□□□ -1.69
COPS3-208ENST00000486032 VAMP1P23763 118 aa4.49□□□□□ -1.69
COPS3-208ENST00000486032 BTCP35070 178 aa4.49□□□□□ -1.69
COPS3-208ENST00000486032 LPAR6P43657 344 aa4.49□□□□□ -1.69
COPS3-208ENST00000486032 F2RL1P55085 397 aa4.49□□□□□ -1.69
COPS3-208ENST00000486032 RIPPLY3P57055 190 aa4.49□□□□□ -1.69
COPS3-208ENST00000486032 GNB1P62873 340 aa4.49□□□□□ -1.69
COPS3-208ENST00000486032 UBA52P62987 128 aaKnown RBP4.49□□□□□ -1.69
COPS3-208ENST00000486032 ID3Q02535 119 aa4.49□□□□□ -1.69
COPS3-208ENST00000486032 ASAH1Q13510 395 aa4.49□□□□□ -1.69
COPS3-208ENST00000486032 RBMS2Q15434 407 aaKnown RBP4.49□□□□□ -1.69
COPS3-208ENST00000486032 PDPNQ86YL7 162 aa4.49□□□□□ -1.69
COPS3-208ENST00000486032 SGPP2Q8IWX5 399 aa4.49□□□□□ -1.69
COPS3-208ENST00000486032 VKORC1L1Q8N0U8 176 aa4.49□□□□□ -1.69
COPS3-208ENST00000486032 CENPSQ8N2Z9 138 aa4.49□□□□□ -1.69
COPS3-208ENST00000486032 OR5AN1Q8NGI8 311 aa4.49□□□□□ -1.69
COPS3-208ENST00000486032 OR4S2Q8NH73 311 aa4.49□□□□□ -1.69
COPS3-208ENST00000486032 RNASE11Q8TAA1 199 aaKnown RBP4.49□□□□□ -1.69
COPS3-208ENST00000486032 ABHD5Q8WTS1 349 aa4.49□□□□□ -1.69
COPS3-208ENST00000486032 CASTOR1Q8WTX7 329 aa4.49□□□□□ -1.69
COPS3-208ENST00000486032 FAM216AQ8WUB2 273 aa4.49□□□□□ -1.69
COPS3-208ENST00000486032 ZNF486Q96H40 463 aaPredicted RBP4.49□□□□□ -1.69
COPS3-208ENST00000486032 RASL11BQ9BPW5 248 aa4.49□□□□□ -1.69
COPS3-208ENST00000486032 SLC25A21Q9BQT8 299 aaPredicted RBP4.49□□□□□ -1.69
COPS3-208ENST00000486032 C20orf85Q9H1P6 137 aa4.49□□□□□ -1.69
COPS3-208ENST00000486032 FBXL15Q9H469 300 aa4.49□□□□□ -1.69
COPS3-208ENST00000486032 C5orf66Q9H5L9 145 aa4.49□□□□□ -1.69
COPS3-208ENST00000486032 NAA60Q9H7X0 242 aa4.49□□□□□ -1.69
COPS3-208ENST00000486032 KIAA1456Q9P272 454 aa4.49□□□□□ -1.69
COPS3-208ENST00000486032 MOB4Q9Y3A3 225 aa4.49□□□□□ -1.69
COPS3-208ENST00000486032 CRYM-AS1A6NIL9 109 aa4.48□□□□□ -1.69
COPS3-208ENST00000486032 SRRM4A7MD48 611 aaKnown RBP4.48□□□□□ -1.69
COPS3-208ENST00000486032 VGLL3A8MV65 326 aa4.48□□□□□ -1.69
COPS3-208ENST00000486032 NBR2O15453 112 aa4.48□□□□□ -1.69
COPS3-208ENST00000486032 OR2F2O95006 317 aa4.48□□□□□ -1.69
COPS3-208ENST00000486032 SERPINE2P07093 398 aa4.48□□□□□ -1.69
COPS3-208ENST00000486032 SPNP16150 400 aa4.48□□□□□ -1.69
COPS3-208ENST00000486032 F2RP25116 425 aa4.48□□□□□ -1.69
COPS3-208ENST00000486032 G6PCP35575 357 aa4.48□□□□□ -1.69
COPS3-208ENST00000486032 KIR2DS2P43631 304 aa4.48□□□□□ -1.69
COPS3-208ENST00000486032 DYNLT3P51808 116 aa4.48□□□□□ -1.69
COPS3-208ENST00000486032 ERVK-16P61578 105 aa4.48□□□□□ -1.69
COPS3-208ENST00000486032 RND3P61587 244 aa4.48□□□□□ -1.69
COPS3-208ENST00000486032 BLCAPP62952 87 aa4.48□□□□□ -1.69
COPS3-208ENST00000486032 PPP1R1AQ13522 171 aa4.48□□□□□ -1.69
COPS3-208ENST00000486032 EIF4EBP1Q13541 118 aaPredicted RBP4.48□□□□□ -1.69
COPS3-208ENST00000486032 DCTN2Q13561 401 aaKnown RBP4.48□□□□□ -1.69
COPS3-208ENST00000486032 HABP2Q14520 560 aaPredicted RBP4.48□□□□□ -1.69
COPS3-208ENST00000486032 PSG5Q15238 335 aa4.48□□□□□ -1.69
COPS3-208ENST00000486032 SURF2Q15527 256 aaPredicted RBP4.48□□□□□ -1.69
COPS3-208ENST00000486032 MSMO1Q15800 293 aa4.48□□□□□ -1.69
COPS3-208ENST00000486032 AANATQ16613 207 aa4.48□□□□□ -1.69
COPS3-208ENST00000486032 KRTAP24-1Q3LI83 254 aa4.48□□□□□ -1.69
COPS3-208ENST00000486032 VMA21Q3ZAQ7 101 aa4.48□□□□□ -1.69
COPS3-208ENST00000486032 C4orf46Q504U0 113 aa4.48□□□□□ -1.69
COPS3-208ENST00000486032 LIN54Q6MZP7 749 aa4.48□□□□□ -1.69
COPS3-208ENST00000486032 PLET1Q6UQ28 207 aa4.48□□□□□ -1.69
COPS3-208ENST00000486032 NRARPQ7Z6K4 114 aa4.48□□□□□ -1.69
COPS3-208ENST00000486032 THNSL2Q86YJ6 484 aa4.48□□□□□ -1.69
COPS3-208ENST00000486032 ZNF695Q8IW36 515 aa4.48□□□□□ -1.69
COPS3-208ENST00000486032 Q8N9W7 124 aa4.48□□□□□ -1.69
COPS3-208ENST00000486032 UXS1Q8NBZ7 420 aa4.48□□□□□ -1.69
COPS3-208ENST00000486032 DMBX1Q8NFW5 382 aa4.48□□□□□ -1.69
COPS3-208ENST00000486032 OR52B4Q8NGK2 314 aa4.48□□□□□ -1.69
COPS3-208ENST00000486032 OR4C13Q8NGP0 309 aa4.48□□□□□ -1.69
COPS3-208ENST00000486032 DEDD2Q8WXF8 326 aa4.48□□□□□ -1.69
COPS3-208ENST00000486032 DDB2Q92466 427 aa4.48□□□□□ -1.69
COPS3-208ENST00000486032 TMEM230Q96A57 120 aa4.48□□□□□ -1.69
COPS3-208ENST00000486032 RBM14Q96PK6 669 aaKnown RBP4.48□□□□□ -1.69
COPS3-208ENST00000486032 TP53RKQ96S44 253 aa4.48□□□□□ -1.69
COPS3-208ENST00000486032 TSNAXQ99598 290 aaKnown RBP4.48□□□□□ -1.69
COPS3-208ENST00000486032 SEC22CQ9BRL7 303 aa4.48□□□□□ -1.69
COPS3-208ENST00000486032 PRDM13Q9H4Q3 707 aa4.48□□□□□ -1.69
COPS3-208ENST00000486032 RAB18Q9NP72 206 aa4.48□□□□□ -1.69
COPS3-208ENST00000486032 LIN7CQ9NUP9 197 aaKnown RBP4.48□□□□□ -1.69
COPS3-208ENST00000486032 NUDT15Q9NV35 164 aa4.48□□□□□ -1.69
COPS3-208ENST00000486032 C1RLQ9NZP8 487 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms