RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 PXT1Q8NFP0 134 aa3.79□□□□□ -1.8
PTPN4-210ENST00000485247 OR10G2Q8NGC3 310 aa3.79□□□□□ -1.8
PTPN4-210ENST00000485247 OR51A4Q8NGJ6 313 aa3.79□□□□□ -1.8
PTPN4-210ENST00000485247 OR13C3Q8NGS6 347 aa3.79□□□□□ -1.8
PTPN4-210ENST00000485247 OR52N1Q8NH53 320 aa3.79□□□□□ -1.8
PTPN4-210ENST00000485247 TNFAIP8L1Q8WVP5 186 aa3.79□□□□□ -1.8
PTPN4-210ENST00000485247 MARC2Q969Z3 335 aa3.79□□□□□ -1.8
PTPN4-210ENST00000485247 TLCD1Q96CP7 247 aa3.79□□□□□ -1.8
PTPN4-210ENST00000485247 C17orf77Q96MU5 243 aa3.79□□□□□ -1.8
PTPN4-210ENST00000485247 GPER1Q99527 375 aa3.79□□□□□ -1.8
PTPN4-210ENST00000485247 FEVQ99581 238 aa3.79□□□□□ -1.8
PTPN4-210ENST00000485247 ADGRL4Q9HBW9 690 aa3.79□□□□□ -1.8
PTPN4-210ENST00000485247 CLN6Q9NWW5 311 aa3.79□□□□□ -1.8
PTPN4-210ENST00000485247 TVP23BQ9NYZ1 205 aa3.79□□□□□ -1.8
PTPN4-210ENST00000485247 MRPL27Q9P0M9 148 aaKnown RBP3.79□□□□□ -1.8
PTPN4-210ENST00000485247 PIPOXQ9P0Z9 390 aa3.79□□□□□ -1.8
PTPN4-210ENST00000485247 JPT1Q9UK76 154 aa3.79□□□□□ -1.8
PTPN4-210ENST00000485247 RAB21Q9UL25 225 aa3.79□□□□□ -1.8
PTPN4-210ENST00000485247 S4R3C0 116 aa3.79□□□□□ -1.8
PTPN4-210ENST00000485247 IGHV3-35A0A0C4DH35 117 aa3.78□□□□□ -1.8
PTPN4-210ENST00000485247 NBDYA0A0U1RRE5 68 aa3.78□□□□□ -1.8
PTPN4-210ENST00000485247 A0A1W2PQL4 384 aaPredicted RBP3.78□□□□□ -1.8
PTPN4-210ENST00000485247 OR4C46A6NHA9 309 aa3.78□□□□□ -1.8
PTPN4-210ENST00000485247 FAM90A7PA6NKC0 464 aa3.78□□□□□ -1.8
PTPN4-210ENST00000485247 GABRPO00591 440 aa3.78□□□□□ -1.8
PTPN4-210ENST00000485247 RAB29O14966 203 aa3.78□□□□□ -1.8
PTPN4-210ENST00000485247 YPEL1O60688 119 aa3.78□□□□□ -1.8
PTPN4-210ENST00000485247 CDRT1O95170 752 aa3.78□□□□□ -1.8
PTPN4-210ENST00000485247 MAS1P04201 325 aa3.78□□□□□ -1.8
PTPN4-210ENST00000485247 MIFP14174 115 aa3.78□□□□□ -1.8
PTPN4-210ENST00000485247 HOXB6P17509 224 aaKnown RBP3.78□□□□□ -1.8
PTPN4-210ENST00000485247 FUSP35637 526 aaKnown RBP eCLIP3.78□□□□□ -1.8
PTPN4-210ENST00000485247 RBM11P57052 281 aaKnown RBP3.78□□□□□ -1.8
PTPN4-210ENST00000485247 PSME3P61289 254 aa3.78□□□□□ -1.8
PTPN4-210ENST00000485247 DMKNQ6E0U4 476 aaPredicted RBP3.78□□□□□ -1.8
PTPN4-210ENST00000485247 LAMTOR1Q6IAA8 161 aa3.78□□□□□ -1.8
PTPN4-210ENST00000485247 WDR93Q6P2C0 686 aa3.78□□□□□ -1.8
PTPN4-210ENST00000485247 TRAT1Q6PIZ9 186 aa3.78□□□□□ -1.8
PTPN4-210ENST00000485247 ABHD14BQ96IU4 210 aa3.78□□□□□ -1.8
PTPN4-210ENST00000485247 NSMCE2Q96MF7 247 aa3.78□□□□□ -1.8
PTPN4-210ENST00000485247 YPEL2Q96QA6 119 aa3.78□□□□□ -1.8
PTPN4-210ENST00000485247 SULT4A1Q9BR01 284 aa3.78□□□□□ -1.8
PTPN4-210ENST00000485247 SIKE1Q9BRV8 207 aa3.78□□□□□ -1.8
PTPN4-210ENST00000485247 RNF167Q9H6Y7 350 aa3.78□□□□□ -1.8
PTPN4-210ENST00000485247 REEP1Q9H902 201 aa3.78□□□□□ -1.8
PTPN4-210ENST00000485247 EFCAB1Q9HAE3 211 aa3.78□□□□□ -1.8
PTPN4-210ENST00000485247 MRGBPQ9NV56 204 aa3.78□□□□□ -1.8
PTPN4-210ENST00000485247 KCNIP1Q9NZI2 227 aa3.78□□□□□ -1.8
PTPN4-210ENST00000485247 ABCD2Q9UBJ2 740 aa3.78□□□□□ -1.8
PTPN4-210ENST00000485247 V9GYY5 206 aaPredicted RBP3.78□□□□□ -1.8
PTPN4-210ENST00000485247 NACAE9PAV3 2078 aa3.78□□□□□ -1.8
PTPN4-210ENST00000485247 HMCN2Q8NDA2 5059 aa3.77□□□□□ -1.81
PTPN4-210ENST00000485247 A0A1W2PP11 408 aa3.77□□□□□ -1.81
PTPN4-210ENST00000485247 C15orf61A6NNL5 157 aa3.77□□□□□ -1.81
PTPN4-210ENST00000485247 MCRIP1C9JLW8 97 aa3.77□□□□□ -1.81
PTPN4-210ENST00000485247 ARPC2O15144 300 aa3.77□□□□□ -1.81
PTPN4-210ENST00000485247 EDF1O60869 148 aaKnown RBP3.77□□□□□ -1.81
PTPN4-210ENST00000485247 SULT1C4O75897 302 aa3.77□□□□□ -1.81
PTPN4-210ENST00000485247 IGLV2-23P01705 113 aa3.77□□□□□ -1.81
PTPN4-210ENST00000485247 ISG15P05161 165 aa3.77□□□□□ -1.81
PTPN4-210ENST00000485247 CRYGBP07316 175 aa3.77□□□□□ -1.81
PTPN4-210ENST00000485247 COX4I1P13073 169 aa3.77□□□□□ -1.81
PTPN4-210ENST00000485247 RPA2P15927 270 aa3.77□□□□□ -1.81
PTPN4-210ENST00000485247 SERPINA2P20848 420 aa3.77□□□□□ -1.81
PTPN4-210ENST00000485247 ATP6V1B2P21281 511 aa3.77□□□□□ -1.81
PTPN4-210ENST00000485247 NPY1RP25929 384 aa3.77□□□□□ -1.81
PTPN4-210ENST00000485247 TFPI2P48307 235 aa3.77□□□□□ -1.81
PTPN4-210ENST00000485247 CRISP1P54107 249 aa3.77□□□□□ -1.81
PTPN4-210ENST00000485247 TNXAQ16473 311 aa3.77□□□□□ -1.81
PTPN4-210ENST00000485247 MPV17LQ2QL34 196 aa3.77□□□□□ -1.81
PTPN4-210ENST00000485247 TP53I3Q53FA7 332 aa3.77□□□□□ -1.81
PTPN4-210ENST00000485247 NHLRC3Q5JS37 347 aa3.77□□□□□ -1.81
PTPN4-210ENST00000485247 OR2T5Q6IEZ7 315 aa3.77□□□□□ -1.81
PTPN4-210ENST00000485247 C9orf47Q6ZRZ4 202 aa3.77□□□□□ -1.81
PTPN4-210ENST00000485247 ZNF383Q8NA42 475 aa3.77□□□□□ -1.81
PTPN4-210ENST00000485247 OR10H4Q8NGA5 316 aa3.77□□□□□ -1.81
PTPN4-210ENST00000485247 OR5D14Q8NGL3 314 aa3.77□□□□□ -1.81
PTPN4-210ENST00000485247 OR2G2Q8NGZ5 317 aa3.77□□□□□ -1.81
PTPN4-210ENST00000485247 OR2T29Q8NH02 315 aa3.77□□□□□ -1.81
PTPN4-210ENST00000485247 GIPC3Q8TF64 312 aa3.77□□□□□ -1.81
PTPN4-210ENST00000485247 GLMPQ8WWB7 406 aa3.77□□□□□ -1.81
PTPN4-210ENST00000485247 IL1F10Q8WWZ1 152 aa3.77□□□□□ -1.81
PTPN4-210ENST00000485247 SRSF12Q8WXF0 261 aaKnown RBP3.77□□□□□ -1.81
PTPN4-210ENST00000485247 PELI1Q96FA3 418 aa3.77□□□□□ -1.81
PTPN4-210ENST00000485247 CYYR1Q96J86 154 aa3.77□□□□□ -1.81
PTPN4-210ENST00000485247 NICN1Q9BSH3 213 aa3.77□□□□□ -1.81
PTPN4-210ENST00000485247 TEX12Q9BXU0 123 aa3.77□□□□□ -1.81
PTPN4-210ENST00000485247 YTHDF1Q9BYJ9 559 aaKnown RBP3.77□□□□□ -1.81
PTPN4-210ENST00000485247 TMBIM4Q9HC24 238 aa3.77□□□□□ -1.81
PTPN4-210ENST00000485247 ARL8BQ9NVJ2 186 aa3.77□□□□□ -1.81
PTPN4-210ENST00000485247 GNG8Q9UK08 70 aa3.77□□□□□ -1.81
PTPN4-210ENST00000485247 UFC1Q9Y3C8 167 aa3.77□□□□□ -1.81
PTPN4-210ENST00000485247 IGKV3-7A0A075B6H7 116 aa3.76□□□□□ -1.81
PTPN4-210ENST00000485247 A0A1B0GW64 132 aa3.76□□□□□ -1.81
PTPN4-210ENST00000485247 M0R129 80 aa3.76□□□□□ -1.81
PTPN4-210ENST00000485247 PRYO14603 147 aa3.76□□□□□ -1.81
PTPN4-210ENST00000485247 TGOLN2O43493 480 aa3.76□□□□□ -1.81
PTPN4-210ENST00000485247 PRKYO43930 277 aa3.76□□□□□ -1.81
PTPN4-210ENST00000485247 MRPS14O60783 128 aaKnown RBP3.76□□□□□ -1.81
PTPN4-210ENST00000485247 APOA2P02652 100 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 291.3 ms