RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 MCFD2Q8NI22 146 aa9.92□□□□□ -0.82
HDAC6-227ENST00000485102 ARHGAP5-AS1Q96IT6 56 aa9.92□□□□□ -0.82
HDAC6-227ENST00000485102 ABHD14BQ96IU4 210 aa9.92□□□□□ -0.82
HDAC6-227ENST00000485102 PECRQ9BY49 303 aa9.92□□□□□ -0.82
HDAC6-227ENST00000485102 C11orf54Q9H0W9 315 aaPredicted RBP9.92□□□□□ -0.82
HDAC6-227ENST00000485102 SCPEP1Q9HB40 452 aa9.92□□□□□ -0.82
HDAC6-227ENST00000485102 C13orf42A0A1B0GVH6 325 aa9.91□□□□□ -0.82
HDAC6-227ENST00000485102 FOXI3A8MTJ6 420 aaPredicted RBP9.91□□□□□ -0.82
HDAC6-227ENST00000485102 SOCS1O15524 211 aa9.91□□□□□ -0.82
HDAC6-227ENST00000485102 JTBO76095 146 aa9.91□□□□□ -0.82
HDAC6-227ENST00000485102 IGKV1-16P04430 117 aa9.91□□□□□ -0.82
HDAC6-227ENST00000485102 CTXN2P0C2S0 81 aa9.91□□□□□ -0.82
HDAC6-227ENST00000485102 AADACP22760 399 aa9.91□□□□□ -0.82
HDAC6-227ENST00000485102 ZBTB25P24278 435 aa9.91□□□□□ -0.82
HDAC6-227ENST00000485102 PTBP1P26599 531 aaKnown RBP eCLIP9.91□□□□□ -0.82
HDAC6-227ENST00000485102 TGFBR1P36897 503 aa9.91□□□□□ -0.82
HDAC6-227ENST00000485102 SSBP2P81877 361 aaPredicted RBP9.91□□□□□ -0.82
HDAC6-227ENST00000485102 FXYD3Q14802 87 aa9.91□□□□□ -0.82
HDAC6-227ENST00000485102 CDNFQ49AH0 187 aa9.91□□□□□ -0.82
HDAC6-227ENST00000485102 ZNF343Q6P1L6 599 aa9.91□□□□□ -0.82
HDAC6-227ENST00000485102 Q6ZS49 121 aa9.91□□□□□ -0.82
HDAC6-227ENST00000485102 PDPNQ86YL7 162 aa9.91□□□□□ -0.82
HDAC6-227ENST00000485102 Q8N402 240 aa9.91□□□□□ -0.82
HDAC6-227ENST00000485102 NICN1Q9BSH3 213 aa9.91□□□□□ -0.82
HDAC6-227ENST00000485102 RSRP1Q9BUV0 290 aa9.91□□□□□ -0.82
HDAC6-227ENST00000485102 C6orf62Q9GZU0 229 aaPredicted RBP9.91□□□□□ -0.82
HDAC6-227ENST00000485102 PARP12Q9H0J9 701 aaKnown RBP9.91□□□□□ -0.82
HDAC6-227ENST00000485102 MFNGO00587 321 aa9.9□□□□□ -0.82
HDAC6-227ENST00000485102 CSN3P07498 182 aa9.9□□□□□ -0.82
HDAC6-227ENST00000485102 CEACAM6P40199 344 aa9.9□□□□□ -0.82
HDAC6-227ENST00000485102 LGALS7P47929 136 aa9.9□□□□□ -0.82
HDAC6-227ENST00000485102 TMEM50BP56557 158 aa9.9□□□□□ -0.82
HDAC6-227ENST00000485102 RPS16P62249 146 aaKnown RBP9.9□□□□□ -0.82
HDAC6-227ENST00000485102 TATDN3Q17R31 274 aa9.9□□□□□ -0.82
HDAC6-227ENST00000485102 LCN12Q6JVE5 192 aa9.9□□□□□ -0.82
HDAC6-227ENST00000485102 GTSCR1Q86UQ5 136 aa9.9□□□□□ -0.82
HDAC6-227ENST00000485102 ZNF383Q8NA42 475 aa9.9□□□□□ -0.82
HDAC6-227ENST00000485102 OR2K2Q8NGT1 345 aa9.9□□□□□ -0.82
HDAC6-227ENST00000485102 USMG5Q96IX5 58 aa9.9□□□□□ -0.82
HDAC6-227ENST00000485102 CLCC1Q96S66 551 aa9.9□□□□□ -0.82
HDAC6-227ENST00000485102 SLIRPQ9GZT3 109 aaKnown RBP9.9□□□□□ -0.82
HDAC6-227ENST00000485102 NXF2Q9GZY0 626 aaKnown RBP9.9□□□□□ -0.82
HDAC6-227ENST00000485102 TUBA4BQ9H853 241 aa9.9□□□□□ -0.82
HDAC6-227ENST00000485102 TRAV18A0A075B6X5 111 aa9.89□□□□□ -0.83
HDAC6-227ENST00000485102 A0A0B4J203 849 aa9.89□□□□□ -0.83
HDAC6-227ENST00000485102 A6NHS1 94 aa9.89□□□□□ -0.83
HDAC6-227ENST00000485102 CRYGBP07316 175 aa9.89□□□□□ -0.83
HDAC6-227ENST00000485102 PRSS3P35030 304 aa9.89□□□□□ -0.83
HDAC6-227ENST00000485102 SYNJ2BPP57105 145 aa9.89□□□□□ -0.83
HDAC6-227ENST00000485102 SSBP1Q04837 148 aaKnown RBP9.89□□□□□ -0.83
HDAC6-227ENST00000485102 SPANXN2Q5MJ10 180 aa9.89□□□□□ -0.83
HDAC6-227ENST00000485102 LAX1Q8IWV1 398 aa9.89□□□□□ -0.83
HDAC6-227ENST00000485102 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.89□□□□□ -0.83
HDAC6-227ENST00000485102 OR5T1Q8NG75 326 aa9.89□□□□□ -0.83
HDAC6-227ENST00000485102 OR4A4PQ8NGN8 299 aa9.89□□□□□ -0.83
HDAC6-227ENST00000485102 OR5H6Q8NGV6 325 aa9.89□□□□□ -0.83
HDAC6-227ENST00000485102 SLC25A38Q96DW6 304 aa9.89□□□□□ -0.83
HDAC6-227ENST00000485102 TINAGL1Q9GZM7 467 aaPredicted RBP9.89□□□□□ -0.83
HDAC6-227ENST00000485102 HIPK2Q9H2X6 1198 aa9.89□□□□□ -0.83
HDAC6-227ENST00000485102 ZNF355PQ9NSJ1 428 aa9.89□□□□□ -0.83
HDAC6-227ENST00000485102 PEF1Q9UBV8 284 aaKnown RBP9.89□□□□□ -0.83
HDAC6-227ENST00000485102 AK3Q9UIJ7 227 aa9.89□□□□□ -0.83
HDAC6-227ENST00000485102 A0A0A6YYD4 124 aa9.88□□□□□ -0.83
HDAC6-227ENST00000485102 ANKRD34BA5PLL1 514 aa9.88□□□□□ -0.83
HDAC6-227ENST00000485102 TRDCB7Z8K6 153 aa9.88□□□□□ -0.83
HDAC6-227ENST00000485102 SLC25A17O43808 307 aa9.88□□□□□ -0.83
HDAC6-227ENST00000485102 OR2A4O95047 310 aa9.88□□□□□ -0.83
HDAC6-227ENST00000485102 IGLV2-23P01705 113 aa9.88□□□□□ -0.83
HDAC6-227ENST00000485102 APOA2P02652 100 aa9.88□□□□□ -0.83
HDAC6-227ENST00000485102 GNB3P16520 340 aa9.88□□□□□ -0.83
HDAC6-227ENST00000485102 HLA-DRB3P79483 266 aa9.88□□□□□ -0.83
HDAC6-227ENST00000485102 TAGLNQ01995 201 aaKnown RBP9.88□□□□□ -0.83
HDAC6-227ENST00000485102 PLAC9Q5JTB6 97 aa9.88□□□□□ -0.83
HDAC6-227ENST00000485102 DRAXINQ8NBI3 349 aaPredicted RBP9.88□□□□□ -0.83
HDAC6-227ENST00000485102 GRPEL2Q8TAA5 225 aa9.88□□□□□ -0.83
HDAC6-227ENST00000485102 DIRAS2Q96HU8 199 aa9.88□□□□□ -0.83
HDAC6-227ENST00000485102 DCUN1D5Q9BTE7 237 aa9.88□□□□□ -0.83
HDAC6-227ENST00000485102 KCNK15Q9H427 330 aa9.88□□□□□ -0.83
HDAC6-227ENST00000485102 AUNIPQ9H7T9 357 aa9.88□□□□□ -0.83
HDAC6-227ENST00000485102 Q9N2K0 584 aa9.88□□□□□ -0.83
HDAC6-227ENST00000485102 IFT46Q9NQC8 304 aa9.88□□□□□ -0.83
HDAC6-227ENST00000485102 TAS2R8Q9NYW2 309 aa9.88□□□□□ -0.83
HDAC6-227ENST00000485102 OR1A1Q9P1Q5 309 aa9.88□□□□□ -0.83
HDAC6-227ENST00000485102 EXTL2Q9UBQ6 330 aa9.88□□□□□ -0.83
HDAC6-227ENST00000485102 ZNF221Q9UK13 617 aa9.88□□□□□ -0.83
HDAC6-227ENST00000485102 CTDSPLO15194 276 aa9.87□□□□□ -0.83
HDAC6-227ENST00000485102 HPGDSO60760 199 aa9.87□□□□□ -0.83
HDAC6-227ENST00000485102 CNIH1O95406 144 aa9.87□□□□□ -0.83
HDAC6-227ENST00000485102 ELK1P19419 428 aa9.87□□□□□ -0.83
HDAC6-227ENST00000485102 LINC00205P59089 165 aa9.87□□□□□ -0.83
HDAC6-227ENST00000485102 TAS2R20P59543 309 aa9.87□□□□□ -0.83
HDAC6-227ENST00000485102 DYRK1AQ13627 763 aa9.87□□□□□ -0.83
HDAC6-227ENST00000485102 SETD6Q8TBK2 473 aa9.87□□□□□ -0.83
HDAC6-227ENST00000485102 DEDD2Q8WXF8 326 aa9.87□□□□□ -0.83
HDAC6-227ENST00000485102 SNAPC3Q92966 411 aa9.87□□□□□ -0.83
HDAC6-227ENST00000485102 IZUMO1RA6ND01 250 aa9.86□□□□□ -0.83
HDAC6-227ENST00000485102 SLC22A5O76082 557 aa9.86□□□□□ -0.83
HDAC6-227ENST00000485102 FCGR3AP08637 254 aa9.86□□□□□ -0.83
HDAC6-227ENST00000485102 SCTP09683 121 aa9.86□□□□□ -0.83
HDAC6-227ENST00000485102 GSTT2BP0CG30 244 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms