RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 PLA2G2EQ9NZK7 142 aa13.62□□□□□ -0.23
CTSA-207ENST00000484855 GOSR1O95249 250 aa13.62□□□□□ -0.23
CTSA-207ENST00000484855 IL3RAP26951 378 aa13.62□□□□□ -0.23
CTSA-207ENST00000484855 TMEM14EPQ6UXP3 125 aa13.62□□□□□ -0.23
CTSA-207ENST00000484855 STPG2Q8N412 459 aa13.62□□□□□ -0.23
CTSA-207ENST00000484855 ZNF843Q8N446 348 aa13.62□□□□□ -0.23
CTSA-207ENST00000484855 NUP50Q9UKX7 468 aa13.62□□□□□ -0.23
CTSA-207ENST00000484855 IGHV2-26A0A0B4J1V2 119 aa13.61□□□□□ -0.23
CTSA-207ENST00000484855 TRAV3A0A0B4J244 114 aa13.61□□□□□ -0.23
CTSA-207ENST00000484855 C22orf46C9J442 243 aa13.61□□□□□ -0.23
CTSA-207ENST00000484855 IGKV1-16P04430 117 aa13.61□□□□□ -0.23
CTSA-207ENST00000484855 LIPFP07098 398 aa13.61□□□□□ -0.23
CTSA-207ENST00000484855 RNF224P0DH78 156 aa13.61□□□□□ -0.23
CTSA-207ENST00000484855 ATP6V0CP27449 155 aa13.61□□□□□ -0.23
CTSA-207ENST00000484855 ZNF137PP52743 207 aa13.61□□□□□ -0.23
CTSA-207ENST00000484855 ARL16Q0P5N6 197 aa13.61□□□□□ -0.23
CTSA-207ENST00000484855 POU2AF1Q16633 256 aa13.61□□□□□ -0.23
CTSA-207ENST00000484855 HAPLN4Q86UW8 402 aa13.61□□□□□ -0.23
CTSA-207ENST00000484855 LILRB2Q8N423 598 aa13.61□□□□□ -0.23
CTSA-207ENST00000484855 LY6G5BQ8NDX9 201 aa13.61□□□□□ -0.23
CTSA-207ENST00000484855 RBMXL1Q96E39 390 aaKnown RBP13.61□□□□□ -0.23
CTSA-207ENST00000484855 OR4C12Q96R67 309 aa13.61□□□□□ -0.23
CTSA-207ENST00000484855 SSBP3Q9BWW4 388 aaPredicted RBP13.61□□□□□ -0.23
CTSA-207ENST00000484855 ONECUT1Q9UBC0 465 aa13.61□□□□□ -0.23
CTSA-207ENST00000484855 STRAPQ9Y3F4 350 aaKnown RBP13.61□□□□□ -0.23
CTSA-207ENST00000484855 hCG_1809904A0A1W2PP81 198 aa13.61□□□□□ -0.23
CTSA-207ENST00000484855 A0A1W2PPE2 198 aa13.61□□□□□ -0.23
CTSA-207ENST00000484855 A0A1W2PR64 198 aa13.61□□□□□ -0.23
CTSA-207ENST00000484855 A0A1W2PRV1 198 aa13.61□□□□□ -0.23
CTSA-207ENST00000484855 C15orf61A6NNL5 157 aa13.61□□□□□ -0.23
CTSA-207ENST00000484855 H0YJW9 148 aa13.61□□□□□ -0.23
CTSA-207ENST00000484855 H7C2Y5 167 aa13.61□□□□□ -0.23
CTSA-207ENST00000484855 FGF2P09038 288 aa13.61□□□□□ -0.23
CTSA-207ENST00000484855 SPCS3P61009 180 aa13.61□□□□□ -0.23
CTSA-207ENST00000484855 TAGLNQ01995 201 aaKnown RBP13.61□□□□□ -0.23
CTSA-207ENST00000484855 OR52E5Q8NH55 327 aa13.61□□□□□ -0.23
CTSA-207ENST00000484855 TNFRSF14Q92956 283 aa13.61□□□□□ -0.23
CTSA-207ENST00000484855 ST6GALNAC6Q969X2 333 aa13.61□□□□□ -0.23
CTSA-207ENST00000484855 DLX1P56177 255 aa13.6□□□□□ -0.23
CTSA-207ENST00000484855 BLOC1S1P78537 153 aa13.6□□□□□ -0.23
CTSA-207ENST00000484855 DIAPH2-AS1Q14236 149 aa13.6□□□□□ -0.23
CTSA-207ENST00000484855 PXDC1Q5TGL8 231 aa13.6□□□□□ -0.23
CTSA-207ENST00000484855 SLC25A24Q6NUK1 477 aa13.6□□□□□ -0.23
CTSA-207ENST00000484855 ZNF429Q86V71 674 aa13.6□□□□□ -0.23
CTSA-207ENST00000484855 TGIF2LXQ8IUE1 241 aa13.6□□□□□ -0.23
CTSA-207ENST00000484855 EIF4E3Q8N5X7 224 aaKnown RBP13.6□□□□□ -0.23
CTSA-207ENST00000484855 OR5AN1Q8NGI8 311 aa13.6□□□□□ -0.23
CTSA-207ENST00000484855 TSNAXQ99598 290 aaKnown RBP13.6□□□□□ -0.23
CTSA-207ENST00000484855 NABP2Q9BQ15 211 aa13.6□□□□□ -0.23
CTSA-207ENST00000484855 CACFD1Q9UGQ2 172 aa13.6□□□□□ -0.23
CTSA-207ENST00000484855 IFNA5P01569 189 aa13.59□□□□□ -0.23
CTSA-207ENST00000484855 OR8G2PQ6IF36 304 aa13.59□□□□□ -0.23
CTSA-207ENST00000484855 TMEM182Q6ZP80 229 aaPredicted RBP13.59□□□□□ -0.23
CTSA-207ENST00000484855 Q6ZRG5 221 aa13.59□□□□□ -0.23
CTSA-207ENST00000484855 ZNF525Q8N782 197 aa13.59□□□□□ -0.23
CTSA-207ENST00000484855 CLCC1Q96S66 551 aa13.59□□□□□ -0.23
CTSA-207ENST00000484855 CLEC7AQ9BXN2 247 aa13.59□□□□□ -0.23
CTSA-207ENST00000484855 ZFYVE26Q68DK2 2539 aa13.59□□□□□ -0.23
CTSA-207ENST00000484855 DOPEY1Q5JWR5 2465 aa13.59□□□□□ -0.23
CTSA-207ENST00000484855 SHOXO15266 292 aa13.59□□□□□ -0.23
CTSA-207ENST00000484855 PRRX1P54821 245 aa13.59□□□□□ -0.23
CTSA-207ENST00000484855 PRB3Q04118 309 aaPredicted RBP13.59□□□□□ -0.23
CTSA-207ENST00000484855 SLC38A11Q08AI6 406 aa13.59□□□□□ -0.23
CTSA-207ENST00000484855 HLA-DRB5Q30154 266 aa13.59□□□□□ -0.23
CTSA-207ENST00000484855 PDLIM3Q53GG5 364 aaPredicted RBP13.59□□□□□ -0.23
CTSA-207ENST00000484855 OR2G3Q8NGZ4 309 aa13.59□□□□□ -0.23
CTSA-207ENST00000484855 OSR1Q8TAX0 266 aaPredicted RBP13.59□□□□□ -0.23
CTSA-207ENST00000484855 GNPNAT1Q96EK6 184 aaPredicted RBP13.59□□□□□ -0.23
CTSA-207ENST00000484855 AIFM2Q9BRQ8 373 aa13.59□□□□□ -0.23
CTSA-207ENST00000484855 FOXA2Q9Y261 457 aaPredicted RBP13.59□□□□□ -0.23
CTSA-207ENST00000484855 ARHGAP32A7KAX9 2087 aa13.59□□□□□ -0.23
CTSA-207ENST00000484855 LOC105371242A0A075B767 164 aa13.58□□□□□ -0.24
CTSA-207ENST00000484855 A8MXK9 166 aa13.58□□□□□ -0.24
CTSA-207ENST00000484855 LY86O95711 162 aa13.58□□□□□ -0.24
CTSA-207ENST00000484855 RAB5CP51148 216 aa13.58□□□□□ -0.24
CTSA-207ENST00000484855 RUNX1Q01196 453 aa13.58□□□□□ -0.24
CTSA-207ENST00000484855 TLE4Q04727 773 aa13.58□□□□□ -0.24
CTSA-207ENST00000484855 PDPNQ86YL7 162 aa13.58□□□□□ -0.24
CTSA-207ENST00000484855 MARC2Q969Z3 335 aa13.58□□□□□ -0.24
CTSA-207ENST00000484855 MARVELD3Q96A59 401 aa13.58□□□□□ -0.24
CTSA-207ENST00000484855 HARBI1Q96MB7 349 aa13.58□□□□□ -0.24
CTSA-207ENST00000484855 PARP11Q9NR21 331 aa13.58□□□□□ -0.24
CTSA-207ENST00000484855 KLF2Q9Y5W3 355 aaPredicted RBP13.58□□□□□ -0.24
CTSA-207ENST00000484855 FLNCQ14315 2725 aa13.58□□□□□ -0.24
CTSA-207ENST00000484855 OVOL3O00110 214 aa13.58□□□□□ -0.24
CTSA-207ENST00000484855 C1QL1O75973 258 aa13.58□□□□□ -0.24
CTSA-207ENST00000484855 IGLV1-47P01700 117 aa13.58□□□□□ -0.24
CTSA-207ENST00000484855 COX7A1P24310 79 aa13.58□□□□□ -0.24
CTSA-207ENST00000484855 PCGF1Q9BSM1 259 aa13.58□□□□□ -0.24
CTSA-207ENST00000484855 HRH4Q9H3N8 390 aa13.58□□□□□ -0.24
CTSA-207ENST00000484855 MMP26Q9NRE1 261 aa13.58□□□□□ -0.24
CTSA-207ENST00000484855 TMEM14BQ9NUH8 114 aa13.58□□□□□ -0.24
CTSA-207ENST00000484855 TCF19Q9Y242 345 aa13.58□□□□□ -0.24
CTSA-207ENST00000484855 SRRM4A7MD48 611 aaKnown RBP13.57□□□□□ -0.24
CTSA-207ENST00000484855 PRH1P02810 166 aa13.57□□□□□ -0.24
CTSA-207ENST00000484855 HOXA1P49639 335 aaPredicted RBP13.57□□□□□ -0.24
CTSA-207ENST00000484855 TMEM177Q53S58 311 aa13.57□□□□□ -0.24
CTSA-207ENST00000484855 BEND2Q8NDZ0 799 aa13.57□□□□□ -0.24
CTSA-207ENST00000484855 FLYWCH2Q96CP2 140 aaKnown RBP13.57□□□□□ -0.24
CTSA-207ENST00000484855 HIPK2Q9H2X6 1198 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms