RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 PRR25Q96S07 402 aa7.82□□□□□ -1.16
CPSF4-213ENST00000484112 HSPB9Q9BQS6 159 aa7.82□□□□□ -1.16
CPSF4-213ENST00000484112 TAS2R8Q9NYW2 309 aa7.82□□□□□ -1.16
CPSF4-213ENST00000484112 METTL1Q9UBP6 276 aaKnown RBP7.82□□□□□ -1.16
CPSF4-213ENST00000484112 MTFP1Q9UDX5 166 aa7.82□□□□□ -1.16
CPSF4-213ENST00000484112 LINC00527Q9UJ94 153 aa7.82□□□□□ -1.16
CPSF4-213ENST00000484112 MEIS3P1A6NDR6 274 aa7.81□□□□□ -1.16
CPSF4-213ENST00000484112 LINC00473A8K010 186 aa7.81□□□□□ -1.16
CPSF4-213ENST00000484112 CTDSP2O14595 271 aa7.81□□□□□ -1.16
CPSF4-213ENST00000484112 IGLV2-23P01705 113 aa7.81□□□□□ -1.16
CPSF4-213ENST00000484112 CRYGBP07316 175 aa7.81□□□□□ -1.16
CPSF4-213ENST00000484112 FGF2P09038 288 aa7.81□□□□□ -1.16
CPSF4-213ENST00000484112 CNTFRP26992 372 aa7.81□□□□□ -1.16
CPSF4-213ENST00000484112 S100GP29377 79 aa7.81□□□□□ -1.16
CPSF4-213ENST00000484112 HRH1P35367 487 aa7.81□□□□□ -1.16
CPSF4-213ENST00000484112 TSPAN5P62079 268 aa7.81□□□□□ -1.16
CPSF4-213ENST00000484112 CX3CL1P78423 397 aa7.81□□□□□ -1.16
CPSF4-213ENST00000484112 AKIRIN2Q53H80 203 aa7.81□□□□□ -1.16
CPSF4-213ENST00000484112 CXorf66Q5JRM2 361 aaPredicted RBP7.81□□□□□ -1.16
CPSF4-213ENST00000484112 TMEM17Q86X19 198 aa7.81□□□□□ -1.16
CPSF4-213ENST00000484112 LAX1Q8IWV1 398 aa7.81□□□□□ -1.16
CPSF4-213ENST00000484112 CMTM1Q8IZ96 169 aa7.81□□□□□ -1.16
CPSF4-213ENST00000484112 MFSD4AQ8N468 514 aa7.81□□□□□ -1.16
CPSF4-213ENST00000484112 OR5M8Q8NGP6 311 aa7.81□□□□□ -1.16
CPSF4-213ENST00000484112 SECTM1Q8WVN6 248 aa7.81□□□□□ -1.16
CPSF4-213ENST00000484112 DIRAS2Q96HU8 199 aa7.81□□□□□ -1.16
CPSF4-213ENST00000484112 ZNF2Q9BSG1 426 aaPredicted RBP7.81□□□□□ -1.16
CPSF4-213ENST00000484112 SLC5A7Q9GZV3 580 aa7.81□□□□□ -1.16
CPSF4-213ENST00000484112 MIXL1Q9H2W2 232 aa7.81□□□□□ -1.16
CPSF4-213ENST00000484112 FBXL15Q9H469 300 aa7.81□□□□□ -1.16
CPSF4-213ENST00000484112 FAM212BQ9NTI7 297 aaPredicted RBP7.81□□□□□ -1.16
CPSF4-213ENST00000484112 TRAV41A0A0B4J266 112 aa7.8□□□□□ -1.16
CPSF4-213ENST00000484112 LINC01548A6NM66 108 aa7.8□□□□□ -1.16
CPSF4-213ENST00000484112 ATP6V0E1O15342 81 aa7.8□□□□□ -1.16
CPSF4-213ENST00000484112 SLC25A17O43808 307 aa7.8□□□□□ -1.16
CPSF4-213ENST00000484112 RAMP3O60896 148 aa7.8□□□□□ -1.16
CPSF4-213ENST00000484112 FCGR3BO75015 233 aa7.8□□□□□ -1.16
CPSF4-213ENST00000484112 BRI3O95415 125 aa7.8□□□□□ -1.16
CPSF4-213ENST00000484112 CRYZL1O95825 349 aa7.8□□□□□ -1.16
CPSF4-213ENST00000484112 HRASP01112 189 aa7.8□□□□□ -1.16
CPSF4-213ENST00000484112 PMP2P02689 132 aa7.8□□□□□ -1.16
CPSF4-213ENST00000484112 IFNA6P05013 189 aa7.8□□□□□ -1.16
CPSF4-213ENST00000484112 PTBP1P26599 531 aaKnown RBP eCLIP7.8□□□□□ -1.16
CPSF4-213ENST00000484112 PSMB8P28062 276 aa7.8□□□□□ -1.16
CPSF4-213ENST00000484112 HLA-DMAP28067 261 aa7.8□□□□□ -1.16
CPSF4-213ENST00000484112 CD40LGP29965 261 aa7.8□□□□□ -1.16
CPSF4-213ENST00000484112 PPIFP30405 207 aaKnown RBP7.8□□□□□ -1.16
CPSF4-213ENST00000484112 ECI1P42126 302 aa7.8□□□□□ -1.16
CPSF4-213ENST00000484112 CDX1P47902 265 aaPredicted RBP7.8□□□□□ -1.16
CPSF4-213ENST00000484112 RFX2P48378 723 aa7.8□□□□□ -1.16
CPSF4-213ENST00000484112 UCP3P55916 312 aa7.8□□□□□ -1.16
CPSF4-213ENST00000484112 TAS2R19P59542 299 aa7.8□□□□□ -1.16
CPSF4-213ENST00000484112 CADM3Q8N126 398 aa7.8□□□□□ -1.16
CPSF4-213ENST00000484112 POC5Q8NA72 575 aa7.8□□□□□ -1.16
CPSF4-213ENST00000484112 TMEM229BQ8NBD8 167 aa7.8□□□□□ -1.16
CPSF4-213ENST00000484112 MINDY2Q8NBR6 621 aa7.8□□□□□ -1.16
CPSF4-213ENST00000484112 MCFD2Q8NI22 146 aa7.8□□□□□ -1.16
CPSF4-213ENST00000484112 SMIM4Q8WVI0 70 aa7.8□□□□□ -1.16
CPSF4-213ENST00000484112 TCTEX1D2Q8WW35 142 aa7.8□□□□□ -1.16
CPSF4-213ENST00000484112 ABHD1Q96SE0 405 aa7.8□□□□□ -1.16
CPSF4-213ENST00000484112 P2RX4Q99571 388 aa7.8□□□□□ -1.16
CPSF4-213ENST00000484112 C6orf62Q9GZU0 229 aaPredicted RBP7.8□□□□□ -1.16
CPSF4-213ENST00000484112 CCL28Q9NRJ3 127 aa7.8□□□□□ -1.16
CPSF4-213ENST00000484112 LSM4Q9Y4Z0 139 aaKnown RBP7.8□□□□□ -1.16
CPSF4-213ENST00000484112 H3BUA1 57 aa7.79□□□□□ -1.16
CPSF4-213ENST00000484112 GPR31O00270 319 aa7.79□□□□□ -1.16
CPSF4-213ENST00000484112 GSTZ1O43708 216 aaPredicted RBP7.79□□□□□ -1.16
CPSF4-213ENST00000484112 HPRT1P00492 218 aa7.79□□□□□ -1.16
CPSF4-213ENST00000484112 CA2P00918 260 aa7.79□□□□□ -1.16
CPSF4-213ENST00000484112 IGLV1-40P01703 118 aa7.79□□□□□ -1.16
CPSF4-213ENST00000484112 CD74P04233 296 aa7.79□□□□□ -1.16
CPSF4-213ENST00000484112 GNRHRP30968 328 aa7.79□□□□□ -1.16
CPSF4-213ENST00000484112 S100A5P33763 92 aa7.79□□□□□ -1.16
CPSF4-213ENST00000484112 MAS1LP35410 378 aa7.79□□□□□ -1.16
CPSF4-213ENST00000484112 LINC00205P59089 165 aa7.79□□□□□ -1.16
CPSF4-213ENST00000484112 TAS2R31P59538 309 aa7.79□□□□□ -1.16
CPSF4-213ENST00000484112 FXYD4P59646 89 aa7.79□□□□□ -1.16
CPSF4-213ENST00000484112 IL18Q14116 193 aa7.79□□□□□ -1.16
CPSF4-213ENST00000484112 MEF2DQ14814 521 aa7.79□□□□□ -1.16
CPSF4-213ENST00000484112 C19orf54Q5BKX5 351 aa7.79□□□□□ -1.16
CPSF4-213ENST00000484112 RNASE10Q5GAN6 216 aaKnown RBP7.79□□□□□ -1.16
CPSF4-213ENST00000484112 ZNF818PQ6ZRF7 136 aa7.79□□□□□ -1.16
CPSF4-213ENST00000484112 ZNF695Q8IW36 515 aa7.79□□□□□ -1.16
CPSF4-213ENST00000484112 MMD2Q8IY49 270 aa7.79□□□□□ -1.16
CPSF4-213ENST00000484112 SLC38A6Q8IZM9 456 aa7.79□□□□□ -1.16
CPSF4-213ENST00000484112 OR52I2Q8NH67 350 aa7.79□□□□□ -1.16
CPSF4-213ENST00000484112 OR4A5Q8NH83 315 aa7.79□□□□□ -1.16
CPSF4-213ENST00000484112 MYOZ3Q8TDC0 251 aa7.79□□□□□ -1.16
CPSF4-213ENST00000484112 DEDD2Q8WXF8 326 aa7.79□□□□□ -1.16
CPSF4-213ENST00000484112 ARPC1AQ92747 370 aa7.79□□□□□ -1.16
CPSF4-213ENST00000484112 ZNF486Q96H40 463 aaPredicted RBP7.79□□□□□ -1.16
CPSF4-213ENST00000484112 RAX2Q96IS3 184 aa7.79□□□□□ -1.16
CPSF4-213ENST00000484112 DCUN1D5Q9BTE7 237 aa7.79□□□□□ -1.16
CPSF4-213ENST00000484112 SLA2Q9H6Q3 261 aa7.79□□□□□ -1.16
CPSF4-213ENST00000484112 PLEKHA2Q9HB19 425 aa7.79□□□□□ -1.16
CPSF4-213ENST00000484112 PARP11Q9NR21 331 aa7.79□□□□□ -1.16
CPSF4-213ENST00000484112 KLK11Q9UBX7 282 aa7.79□□□□□ -1.16
CPSF4-213ENST00000484112 FOXA2Q9Y261 457 aaPredicted RBP7.79□□□□□ -1.16
CPSF4-213ENST00000484112 NUBP2Q9Y5Y2 271 aa7.79□□□□□ -1.16
CPSF4-213ENST00000484112 FABP12A6NFH5 140 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms