RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 C1orf122Q6ZSJ8 110 aa11.41□□□□□ -0.58
CLK3-204ENST00000483723 TMED6Q8WW62 240 aa11.41□□□□□ -0.58
CLK3-204ENST00000483723 AIFM2Q9BRQ8 373 aa11.41□□□□□ -0.58
CLK3-204ENST00000483723 CLEC7AQ9BXN2 247 aa11.41□□□□□ -0.58
CLK3-204ENST00000483723 QTRT1Q9BXR0 403 aaKnown RBP11.41□□□□□ -0.58
CLK3-204ENST00000483723 PLA2G2EQ9NZK7 142 aa11.41□□□□□ -0.58
CLK3-204ENST00000483723 TRAV3A0A0B4J244 114 aa11.4□□□□□ -0.58
CLK3-204ENST00000483723 CST7O76096 145 aa11.4□□□□□ -0.58
CLK3-204ENST00000483723 LY86O95711 162 aa11.4□□□□□ -0.58
CLK3-204ENST00000483723 SPCS3P61009 180 aa11.4□□□□□ -0.58
CLK3-204ENST00000483723 DIAPH2-AS1Q14236 149 aa11.4□□□□□ -0.58
CLK3-204ENST00000483723 OR4A47Q6IF82 309 aa11.4□□□□□ -0.58
CLK3-204ENST00000483723 SSX9Q7RTT3 188 aa11.4□□□□□ -0.58
CLK3-204ENST00000483723 VKORC1L1Q8N0U8 176 aa11.4□□□□□ -0.58
CLK3-204ENST00000483723 OR13D1Q8NGV5 346 aa11.4□□□□□ -0.58
CLK3-204ENST00000483723 OR4A16Q8NH70 328 aa11.4□□□□□ -0.58
CLK3-204ENST00000483723 OSR1Q8TAX0 266 aaPredicted RBP11.4□□□□□ -0.58
CLK3-204ENST00000483723 CIB3Q96Q77 187 aaPredicted RBP11.4□□□□□ -0.58
CLK3-204ENST00000483723 BARX1Q9HBU1 254 aaPredicted RBP11.4□□□□□ -0.58
CLK3-204ENST00000483723 SRRM4A7MD48 611 aaKnown RBP11.4□□□□□ -0.58
CLK3-204ENST00000483723 A8MXK9 166 aa11.4□□□□□ -0.58
CLK3-204ENST00000483723 APOA2P02652 100 aa11.4□□□□□ -0.58
CLK3-204ENST00000483723 IGKV1-16P04430 117 aa11.4□□□□□ -0.58
CLK3-204ENST00000483723 SEC11BP0C7V7 166 aa11.4□□□□□ -0.58
CLK3-204ENST00000483723 LMO4P61968 165 aa11.4□□□□□ -0.58
CLK3-204ENST00000483723 PAX2Q02962 417 aa11.4□□□□□ -0.58
CLK3-204ENST00000483723 ZNF266Q14584 549 aa11.4□□□□□ -0.58
CLK3-204ENST00000483723 HAPLN4Q86UW8 402 aa11.4□□□□□ -0.58
CLK3-204ENST00000483723 STX12Q86Y82 276 aa11.4□□□□□ -0.58
CLK3-204ENST00000483723 PDPNQ86YL7 162 aa11.4□□□□□ -0.58
CLK3-204ENST00000483723 KIR3DL3Q8N743 410 aa11.4□□□□□ -0.58
CLK3-204ENST00000483723 ZNF525Q8N782 197 aa11.4□□□□□ -0.58
CLK3-204ENST00000483723 OR11H6Q8NGC7 330 aa11.4□□□□□ -0.58
CLK3-204ENST00000483723 OR5C1Q8NGR4 320 aa11.4□□□□□ -0.58
CLK3-204ENST00000483723 RNF141Q8WVD5 230 aa11.4□□□□□ -0.58
CLK3-204ENST00000483723 CXorf58Q96LI9 332 aa11.4□□□□□ -0.58
CLK3-204ENST00000483723 PMS2P5A8MQ11 134 aa11.39□□□□□ -0.59
CLK3-204ENST00000483723 H3BP45 60 aa11.39□□□□□ -0.59
CLK3-204ENST00000483723 LY6LH3BQJ8 138 aa11.39□□□□□ -0.59
CLK3-204ENST00000483723 BUB1B-PAK6H3BSN5 160 aa11.39□□□□□ -0.59
CLK3-204ENST00000483723 UPK2O00526 184 aa11.39□□□□□ -0.59
CLK3-204ENST00000483723 SPP1P10451 314 aa11.39□□□□□ -0.59
CLK3-204ENST00000483723 PRTN3P24158 256 aa11.39□□□□□ -0.59
CLK3-204ENST00000483723 MC5RP33032 325 aa11.39□□□□□ -0.59
CLK3-204ENST00000483723 SULT1A2P50226 295 aa11.39□□□□□ -0.59
CLK3-204ENST00000483723 PDLIM4P50479 330 aa11.39□□□□□ -0.59
CLK3-204ENST00000483723 ARL16Q0P5N6 197 aa11.39□□□□□ -0.59
CLK3-204ENST00000483723 TGIF2LXQ8IUE1 241 aa11.39□□□□□ -0.59
CLK3-204ENST00000483723 PUSL1Q8N0Z8 303 aaKnown RBP11.39□□□□□ -0.59
CLK3-204ENST00000483723 OR1S2Q8NGQ3 325 aa11.39□□□□□ -0.59
CLK3-204ENST00000483723 DTD1Q8TEA8 209 aa11.39□□□□□ -0.59
CLK3-204ENST00000483723 LHX4Q969G2 390 aa11.39□□□□□ -0.59
CLK3-204ENST00000483723 REG4Q9BYZ8 158 aa11.39□□□□□ -0.59
CLK3-204ENST00000483723 NARFLQ9H6Q4 476 aa11.39□□□□□ -0.59
CLK3-204ENST00000483723 UNKLQ9H9P5 680 aaKnown RBP11.39□□□□□ -0.59
CLK3-204ENST00000483723 TMEM14BQ9NUH8 114 aa11.39□□□□□ -0.59
CLK3-204ENST00000483723 BET1LQ9NYM9 111 aa11.39□□□□□ -0.59
CLK3-204ENST00000483723 FOXA2Q9Y261 457 aaPredicted RBP11.39□□□□□ -0.59
CLK3-204ENST00000483723 DOPEY1Q5JWR5 2465 aa11.39□□□□□ -0.59
CLK3-204ENST00000483723 TET2Q6N021 2002 aaPredicted RBP11.38□□□□□ -0.59
CLK3-204ENST00000483723 C15orf61A6NNL5 157 aa11.38□□□□□ -0.59
CLK3-204ENST00000483723 ZFP36P26651 326 aaKnown RBP11.38□□□□□ -0.59
CLK3-204ENST00000483723 VDAC2P45880 294 aaPredicted RBP11.38□□□□□ -0.59
CLK3-204ENST00000483723 DLX1P56177 255 aa11.38□□□□□ -0.59
CLK3-204ENST00000483723 ARF6P62330 175 aa11.38□□□□□ -0.59
CLK3-204ENST00000483723 SPANXN5Q5MJ07 72 aa11.38□□□□□ -0.59
CLK3-204ENST00000483723 SP5Q6BEB4 398 aaPredicted RBP11.38□□□□□ -0.59
CLK3-204ENST00000483723 OR4P4Q8NGL7 312 aa11.38□□□□□ -0.59
CLK3-204ENST00000483723 ZDHHC16Q969W1 377 aa11.38□□□□□ -0.59
CLK3-204ENST00000483723 SAT2Q96F10 170 aaPredicted RBP11.38□□□□□ -0.59
CLK3-204ENST00000483723 OR4C12Q96R67 309 aa11.38□□□□□ -0.59
CLK3-204ENST00000483723 CCL19Q99731 98 aa11.38□□□□□ -0.59
CLK3-204ENST00000483723 ONECUT1Q9UBC0 465 aa11.38□□□□□ -0.59
CLK3-204ENST00000483723 LRBAP50851 2863 aa11.38□□□□□ -0.59
CLK3-204ENST00000483723 CEBPZOSA8MTT3 80 aa11.38□□□□□ -0.59
CLK3-204ENST00000483723 RBMXL2O75526 392 aaKnown RBP11.38□□□□□ -0.59
CLK3-204ENST00000483723 DFFBO76075 338 aa11.38□□□□□ -0.59
CLK3-204ENST00000483723 METTL15P1P0C7V9 234 aa11.38□□□□□ -0.59
CLK3-204ENST00000483723 REG1BP48304 166 aa11.38□□□□□ -0.59
CLK3-204ENST00000483723 OR2B8PP59922 312 aa11.38□□□□□ -0.59
CLK3-204ENST00000483723 HSPE1P61604 102 aaKnown RBP11.38□□□□□ -0.59
CLK3-204ENST00000483723 TMEM267Q0VDI3 215 aaPredicted RBP11.38□□□□□ -0.59
CLK3-204ENST00000483723 CLINT1Q14677 625 aa11.38□□□□□ -0.59
CLK3-204ENST00000483723 HCP5Q6MZN7 132 aa11.38□□□□□ -0.59
CLK3-204ENST00000483723 COMMD7Q86VX2 200 aa11.38□□□□□ -0.59
CLK3-204ENST00000483723 TMEM217Q8N7C4 229 aa11.38□□□□□ -0.59
CLK3-204ENST00000483723 OR4C13Q8NGP0 309 aa11.38□□□□□ -0.59
CLK3-204ENST00000483723 CLDND2Q8NHS1 167 aa11.38□□□□□ -0.59
CLK3-204ENST00000483723 FLYWCH2Q96CP2 140 aaKnown RBP11.38□□□□□ -0.59
CLK3-204ENST00000483723 ATP5SQ99766 215 aa11.38□□□□□ -0.59
CLK3-204ENST00000483723 BPESC1Q9GZL8 116 aa11.38□□□□□ -0.59
CLK3-204ENST00000483723 WASHC3Q9Y3C0 194 aa11.38□□□□□ -0.59
CLK3-204ENST00000483723 AMMECR1Q9Y4X0 333 aaPredicted RBP11.38□□□□□ -0.59
CLK3-204ENST00000483723 SHOXO15266 292 aa11.37□□□□□ -0.59
CLK3-204ENST00000483723 FBXO24O75426 580 aa11.37□□□□□ -0.59
CLK3-204ENST00000483723 ARG1P05089 322 aa11.37□□□□□ -0.59
CLK3-204ENST00000483723 PAX1P15863 534 aa11.37□□□□□ -0.59
CLK3-204ENST00000483723 PNKDQ8N490 385 aa11.37□□□□□ -0.59
CLK3-204ENST00000483723 RBMXL1Q96E39 390 aaKnown RBP11.37□□□□□ -0.59
CLK3-204ENST00000483723 PRNDQ9UKY0 176 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms