RNA–Protein interactions for RNA: ENST00000483216.1

USP40-213, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 4

Gene USP40, Length 641 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-213ENST00000483216 GZMBP10144 247 aa4.05□□□□□ -1.76
USP40-213ENST00000483216 FKBP2P26885 142 aaKnown RBP4.05□□□□□ -1.76
USP40-213ENST00000483216 OTX1P32242 354 aaPredicted RBP4.05□□□□□ -1.76
USP40-213ENST00000483216 HRH1P35367 487 aa4.05□□□□□ -1.76
USP40-213ENST00000483216 CD200P41217 278 aa4.05□□□□□ -1.76
USP40-213ENST00000483216 NAA10P41227 235 aaPredicted RBP4.05□□□□□ -1.76
USP40-213ENST00000483216 ZNF136P52737 540 aa4.05□□□□□ -1.76
USP40-213ENST00000483216 FXYD6P3P58550 94 aa4.05□□□□□ -1.76
USP40-213ENST00000483216 HBG1P69891 147 aa4.05□□□□□ -1.76
USP40-213ENST00000483216 HBG2P69892 147 aa4.05□□□□□ -1.76
USP40-213ENST00000483216 IL24Q13007 206 aa4.05□□□□□ -1.76
USP40-213ENST00000483216 SKP2Q13309 424 aa4.05□□□□□ -1.76
USP40-213ENST00000483216 ARFRP1Q13795 201 aa4.05□□□□□ -1.76
USP40-213ENST00000483216 HERPUD1Q15011 391 aa4.05□□□□□ -1.76
USP40-213ENST00000483216 PSMG4Q5JS54 123 aa4.05□□□□□ -1.76
USP40-213ENST00000483216 MRPL2Q5T653 305 aaKnown RBP4.05□□□□□ -1.76
USP40-213ENST00000483216 RPL7L1Q6DKI1 246 aaKnown RBP4.05□□□□□ -1.76
USP40-213ENST00000483216 TMEM184AQ6ZMB5 413 aa4.05□□□□□ -1.76
USP40-213ENST00000483216 BIVMQ86UB2 503 aa4.05□□□□□ -1.76
USP40-213ENST00000483216 DEFB123Q8N688 67 aa4.05□□□□□ -1.76
USP40-213ENST00000483216 CYB561A3Q8NBI2 242 aa4.05□□□□□ -1.76
USP40-213ENST00000483216 APCDD1LQ8NCL9 501 aa4.05□□□□□ -1.76
USP40-213ENST00000483216 ZNF738Q8NE65 137 aa4.05□□□□□ -1.76
USP40-213ENST00000483216 OR4D6Q8NGJ1 314 aa4.05□□□□□ -1.76
USP40-213ENST00000483216 OR2G3Q8NGZ4 309 aa4.05□□□□□ -1.76
USP40-213ENST00000483216 OR10J5Q8NHC4 309 aa4.05□□□□□ -1.76
USP40-213ENST00000483216 NT5CQ8TCD5 201 aa4.05□□□□□ -1.76
USP40-213ENST00000483216 WFDC5Q8TCV5 224 aa4.05□□□□□ -1.76
USP40-213ENST00000483216 ISOC2Q96AB3 205 aa4.05□□□□□ -1.76
USP40-213ENST00000483216 C16orf74Q96GX8 76 aa4.05□□□□□ -1.76
USP40-213ENST00000483216 SLC35E1Q96K37 410 aa4.05□□□□□ -1.76
USP40-213ENST00000483216 SMIM14Q96QK8 99 aa4.05□□□□□ -1.76
USP40-213ENST00000483216 PRSS27Q9BQR3 290 aa4.05□□□□□ -1.76
USP40-213ENST00000483216 NICN1Q9BSH3 213 aa4.05□□□□□ -1.76
USP40-213ENST00000483216 TMEM231Q9H6L2 316 aa4.05□□□□□ -1.76
USP40-213ENST00000483216 MANBALQ9NQG1 85 aa4.05□□□□□ -1.76
USP40-213ENST00000483216 SLC2A9Q9NRM0 540 aa4.05□□□□□ -1.76
USP40-213ENST00000483216 BET1LQ9NYM9 111 aa4.05□□□□□ -1.76
USP40-213ENST00000483216 IL19Q9UHD0 177 aa4.05□□□□□ -1.76
USP40-213ENST00000483216 TAC3Q9UHF0 121 aa4.05□□□□□ -1.76
USP40-213ENST00000483216 ANAPC10Q9UM13 185 aa4.05□□□□□ -1.76
USP40-213ENST00000483216 R4GMQ9 66 aa4.05□□□□□ -1.76
USP40-213ENST00000483216 TDRD6O60522 2096 aaKnown RBP4.05□□□□□ -1.76
USP40-213ENST00000483216 RANBP2P49792 3224 aaKnown RBP4.04□□□□□ -1.76
USP40-213ENST00000483216 HELZP42694 1942 aaKnown RBP4.04□□□□□ -1.76
USP40-213ENST00000483216 TRAV27A0A087WT01 109 aa4.04□□□□□ -1.76
USP40-213ENST00000483216 KIR2DL5BA0A0G2JN68 375 aa4.04□□□□□ -1.76
USP40-213ENST00000483216 KIR2DL5BA0A0G2JPC4 375 aa4.04□□□□□ -1.76
USP40-213ENST00000483216 A0A1B0GWA3 101 aa4.04□□□□□ -1.76
USP40-213ENST00000483216 DHRS7CA6NNS2 312 aa4.04□□□□□ -1.76
USP40-213ENST00000483216 NPIPA7E9PJI5 369 aa4.04□□□□□ -1.76
USP40-213ENST00000483216 H0YL77 283 aa4.04□□□□□ -1.76
USP40-213ENST00000483216 H3BTX0 84 aa4.04□□□□□ -1.76
USP40-213ENST00000483216 AGPAT2O15120 278 aa4.04□□□□□ -1.76
USP40-213ENST00000483216 ZNF264O43296 627 aa4.04□□□□□ -1.76
USP40-213ENST00000483216 TNFSF13O75888 250 aa4.04□□□□□ -1.76
USP40-213ENST00000483216 PMP2P02689 132 aa4.04□□□□□ -1.76
USP40-213ENST00000483216 MT-ND6P03923 174 aa4.04□□□□□ -1.76
USP40-213ENST00000483216 ARG1P05089 322 aa4.04□□□□□ -1.76
USP40-213ENST00000483216 CTXN2P0C2S0 81 aa4.04□□□□□ -1.76
USP40-213ENST00000483216 GIMD1P0DJR0 217 aa4.04□□□□□ -1.76
USP40-213ENST00000483216 NPIPA8P0DM63 369 aa4.04□□□□□ -1.76
USP40-213ENST00000483216 OR13C7P0DN81 318 aa4.04□□□□□ -1.76
USP40-213ENST00000483216 SLC25A6P12236 298 aa4.04□□□□□ -1.76
USP40-213ENST00000483216 CPMP14384 443 aa4.04□□□□□ -1.76
USP40-213ENST00000483216 IGFBP3P17936 291 aaPredicted RBP4.04□□□□□ -1.76
USP40-213ENST00000483216 DTYMKP23919 212 aa4.04□□□□□ -1.76
USP40-213ENST00000483216 BMI1P35226 326 aa4.04□□□□□ -1.76
USP40-213ENST00000483216 GUCA1AP43080 201 aaPredicted RBP4.04□□□□□ -1.76
USP40-213ENST00000483216 PSMB3P49720 205 aa4.04□□□□□ -1.76
USP40-213ENST00000483216 EMDP50402 254 aa4.04□□□□□ -1.76
USP40-213ENST00000483216 DAP3P51398 398 aaKnown RBP4.04□□□□□ -1.76
USP40-213ENST00000483216 EMP2P54851 167 aa4.04□□□□□ -1.76
USP40-213ENST00000483216 BIDP55957 195 aa4.04□□□□□ -1.76
USP40-213ENST00000483216 BPIFB3P59826 476 aa4.04□□□□□ -1.76
USP40-213ENST00000483216 UBE2G2P60604 165 aa4.04□□□□□ -1.76
USP40-213ENST00000483216 RPL32P62910 135 aaKnown RBP4.04□□□□□ -1.76
USP40-213ENST00000483216 CSNK1G2P78368 415 aa4.04□□□□□ -1.76
USP40-213ENST00000483216 IL15RAQ13261 267 aa4.04□□□□□ -1.76
USP40-213ENST00000483216 FZD2Q14332 565 aa4.04□□□□□ -1.76
USP40-213ENST00000483216 OR8B8Q15620 311 aa4.04□□□□□ -1.76
USP40-213ENST00000483216 ZNF141Q15928 474 aa4.04□□□□□ -1.76
USP40-213ENST00000483216 PMCHL1Q16048 86 aa4.04□□□□□ -1.76
USP40-213ENST00000483216 KRTAP13-3Q3SY46 172 aa4.04□□□□□ -1.76
USP40-213ENST00000483216 NCR3LG1Q68D85 454 aa4.04□□□□□ -1.76
USP40-213ENST00000483216 ZNF705AQ6ZN79 300 aaPredicted RBP4.04□□□□□ -1.76
USP40-213ENST00000483216 CMTM1Q8IZ96 169 aa4.04□□□□□ -1.76
USP40-213ENST00000483216 KIR2DL5AQ8N109 375 aa4.04□□□□□ -1.76
USP40-213ENST00000483216 ZNF664Q8N3J9 261 aa4.04□□□□□ -1.76
USP40-213ENST00000483216 OR4D5Q8NGN0 318 aa4.04□□□□□ -1.76
USP40-213ENST00000483216 OR6N2Q8NGY6 317 aa4.04□□□□□ -1.76
USP40-213ENST00000483216 ZNF563Q8TA94 476 aa4.04□□□□□ -1.76
USP40-213ENST00000483216 FAM213BQ8TBF2 198 aa4.04□□□□□ -1.76
USP40-213ENST00000483216 GPR119Q8TDV5 335 aa4.04□□□□□ -1.76
USP40-213ENST00000483216 IL22RA2Q969J5 263 aa4.04□□□□□ -1.76
USP40-213ENST00000483216 RERGQ96A58 199 aaPredicted RBP4.04□□□□□ -1.76
USP40-213ENST00000483216 TMEM186Q96B77 213 aa4.04□□□□□ -1.76
USP40-213ENST00000483216 OR10C1Q96KK4 312 aa4.04□□□□□ -1.76
USP40-213ENST00000483216 YPEL4Q96NS1 127 aa4.04□□□□□ -1.76
USP40-213ENST00000483216 IP6K3Q96PC2 410 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms