RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 AIREO43918 545 aa5.56□□□□□ -1.52
CSDE1-206ENST00000483030 SNAPINO95295 136 aa5.56□□□□□ -1.52
CSDE1-206ENST00000483030 CRYGBP07316 175 aa5.56□□□□□ -1.52
CSDE1-206ENST00000483030 SCTP09683 121 aa5.56□□□□□ -1.52
CSDE1-206ENST00000483030 UBBP0CG47 229 aa5.56□□□□□ -1.52
CSDE1-206ENST00000483030 CELP19835 753 aa5.56□□□□□ -1.52
CSDE1-206ENST00000483030 GALP22466 123 aa5.56□□□□□ -1.52
CSDE1-206ENST00000483030 PMS2P11Q13670 270 aa5.56□□□□□ -1.52
CSDE1-206ENST00000483030 DEFB114Q30KQ6 69 aa5.56□□□□□ -1.52
CSDE1-206ENST00000483030 TMEM177Q53S58 311 aa5.56□□□□□ -1.52
CSDE1-206ENST00000483030 ZFP1Q6P2D0 407 aa5.56□□□□□ -1.52
CSDE1-206ENST00000483030 MOB1BQ7L9L4 216 aa5.56□□□□□ -1.52
CSDE1-206ENST00000483030 LAX1Q8IWV1 398 aa5.56□□□□□ -1.52
CSDE1-206ENST00000483030 SLC24A4Q8NFF2 622 aa5.56□□□□□ -1.52
CSDE1-206ENST00000483030 KCNG3Q8TAE7 436 aa5.56□□□□□ -1.52
CSDE1-206ENST00000483030 DYNLRB2Q8TF09 96 aa5.56□□□□□ -1.52
CSDE1-206ENST00000483030 PTX4Q96A99 478 aa5.56□□□□□ -1.52
CSDE1-206ENST00000483030 TMEM80Q96HE8 168 aa5.56□□□□□ -1.52
CSDE1-206ENST00000483030 PHB2Q99623 299 aa5.56□□□□□ -1.52
CSDE1-206ENST00000483030 NICN1Q9BSH3 213 aa5.56□□□□□ -1.52
CSDE1-206ENST00000483030 HDHD3Q9BSH5 251 aaPredicted RBP5.56□□□□□ -1.52
CSDE1-206ENST00000483030 ST6GALNAC5Q9BVH7 336 aa5.56□□□□□ -1.52
CSDE1-206ENST00000483030 TMEM59Q9BXS4 323 aa5.56□□□□□ -1.52
CSDE1-206ENST00000483030 RIMS4Q9H426 269 aaPredicted RBP5.56□□□□□ -1.52
CSDE1-206ENST00000483030 KCNK15Q9H427 330 aa5.56□□□□□ -1.52
CSDE1-206ENST00000483030 AK3Q9UIJ7 227 aa5.56□□□□□ -1.52
CSDE1-206ENST00000483030 A0A0A6YYD4 124 aa5.55□□□□□ -1.52
CSDE1-206ENST00000483030 TRBV6-6A0A0A6YYG2 114 aa5.55□□□□□ -1.52
CSDE1-206ENST00000483030 IGKV1-6A0A0C4DH72 117 aa5.55□□□□□ -1.52
CSDE1-206ENST00000483030 PGPEP1LA6NFU8 196 aa5.55□□□□□ -1.52
CSDE1-206ENST00000483030 BET1O15155 118 aa5.55□□□□□ -1.52
CSDE1-206ENST00000483030 SOCS1O15524 211 aa5.55□□□□□ -1.52
CSDE1-206ENST00000483030 SSX5O60225 188 aa5.55□□□□□ -1.52
CSDE1-206ENST00000483030 PRH1P02810 166 aa5.55□□□□□ -1.52
CSDE1-206ENST00000483030 OR9G9P0C7N8 305 aa5.55□□□□□ -1.52
CSDE1-206ENST00000483030 FOLR2P14207 255 aa5.55□□□□□ -1.52
CSDE1-206ENST00000483030 EDN2P20800 178 aa5.55□□□□□ -1.52
CSDE1-206ENST00000483030 PTBP1P26599 531 aaKnown RBP eCLIP5.55□□□□□ -1.524e-9■■■■■ 37.3
CSDE1-206ENST00000483030 NUP62P37198 522 aaPredicted RBP5.55□□□□□ -1.52
CSDE1-206ENST00000483030 KIR2DS2P43631 304 aa5.55□□□□□ -1.52
CSDE1-206ENST00000483030 TAS2R43P59537 309 aa5.55□□□□□ -1.52
CSDE1-206ENST00000483030 HLA-DRB3P79483 266 aa5.55□□□□□ -1.52
CSDE1-206ENST00000483030 RHOGP84095 191 aa5.55□□□□□ -1.52
CSDE1-206ENST00000483030 ATP5G2Q06055 141 aa5.55□□□□□ -1.52
CSDE1-206ENST00000483030 ST3GAL4Q11206 333 aa5.55□□□□□ -1.52
CSDE1-206ENST00000483030 UNC119Q13432 240 aa5.55□□□□□ -1.52
CSDE1-206ENST00000483030 MED21Q13503 144 aa5.55□□□□□ -1.52
CSDE1-206ENST00000483030 INSL4Q14641 139 aa5.55□□□□□ -1.52
CSDE1-206ENST00000483030 PLECQ15149 4684 aaKnown RBP5.55□□□□□ -1.52
CSDE1-206ENST00000483030 MRGPRG-AS1Q2M3A8 158 aa5.55□□□□□ -1.52
CSDE1-206ENST00000483030 C1orf100Q5SVJ3 147 aa5.55□□□□□ -1.52
CSDE1-206ENST00000483030 GLT8D1Q68CQ7 371 aa5.55□□□□□ -1.52
CSDE1-206ENST00000483030 ZBTB34Q8NCN2 500 aa5.55□□□□□ -1.52
CSDE1-206ENST00000483030 ADAD2Q8NCV1 583 aaKnown RBP5.55□□□□□ -1.52
CSDE1-206ENST00000483030 ZNF555Q8NEP9 628 aa5.55□□□□□ -1.52
CSDE1-206ENST00000483030 GGHQ92820 318 aa5.55□□□□□ -1.52
CSDE1-206ENST00000483030 HARBI1Q96MB7 349 aa5.55□□□□□ -1.52
CSDE1-206ENST00000483030 ATP6V0BQ99437 205 aa5.55□□□□□ -1.52
CSDE1-206ENST00000483030 OVOL2Q9BRP0 275 aa5.55□□□□□ -1.52
CSDE1-206ENST00000483030 TM2D1Q9BX74 207 aa5.55□□□□□ -1.52
CSDE1-206ENST00000483030 Q9N2K0 584 aa5.55□□□□□ -1.52
CSDE1-206ENST00000483030 AKIP1Q9NQ31 210 aa5.55□□□□□ -1.52
CSDE1-206ENST00000483030 RDH8Q9NYR8 311 aa5.55□□□□□ -1.52
CSDE1-206ENST00000483030 ZNF230Q9UIE0 474 aaPredicted RBP5.55□□□□□ -1.52
CSDE1-206ENST00000483030 SELENOKQ9Y6D0 94 aa5.55□□□□□ -1.52
CSDE1-206ENST00000483030 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.54□□□□□ -1.52
CSDE1-206ENST00000483030 C2orf70A6NJV1 201 aa5.54□□□□□ -1.52
CSDE1-206ENST00000483030 TMEM14DPA8MWL7 114 aa5.54□□□□□ -1.52
CSDE1-206ENST00000483030 MPPED1O15442 326 aa5.54□□□□□ -1.52
CSDE1-206ENST00000483030 TUSC2O75896 110 aa5.54□□□□□ -1.52
CSDE1-206ENST00000483030 OR2C1O95371 312 aa5.54□□□□□ -1.52
CSDE1-206ENST00000483030 HLA-AP01891 365 aaKnown RBP5.54□□□□□ -1.52
CSDE1-206ENST00000483030 CD1AP06126 327 aa5.54□□□□□ -1.52
CSDE1-206ENST00000483030 QRFPP83859 136 aa5.54□□□□□ -1.52
CSDE1-206ENST00000483030 ZNF45Q02386 682 aa5.54□□□□□ -1.52
CSDE1-206ENST00000483030 EXOSC2Q13868 293 aaKnown RBP5.54□□□□□ -1.52
CSDE1-206ENST00000483030 TNXAQ16473 311 aa5.54□□□□□ -1.52
CSDE1-206ENST00000483030 PRSS8Q16651 343 aa5.54□□□□□ -1.52
CSDE1-206ENST00000483030 C2orf76Q3KRA6 126 aa5.54□□□□□ -1.52
CSDE1-206ENST00000483030 ACSM3Q53FZ2 586 aa5.54□□□□□ -1.52
CSDE1-206ENST00000483030 SAPCD1Q5SSQ6 148 aa5.54□□□□□ -1.52
CSDE1-206ENST00000483030 IDO2Q6ZQW0 420 aa5.54□□□□□ -1.52
CSDE1-206ENST00000483030 LRRTM1Q86UE6 522 aa5.54□□□□□ -1.52
CSDE1-206ENST00000483030 RPP25LQ8N5L8 163 aaKnown RBP5.54□□□□□ -1.52
CSDE1-206ENST00000483030 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.54□□□□□ -1.52
CSDE1-206ENST00000483030 DDB2Q92466 427 aa5.54□□□□□ -1.52
CSDE1-206ENST00000483030 FANCD2OSQ96PS1 177 aa5.54□□□□□ -1.52
CSDE1-206ENST00000483030 SPXQ9BT56 116 aa5.54□□□□□ -1.52
CSDE1-206ENST00000483030 KRTAP9-2Q9BYQ4 174 aa5.54□□□□□ -1.52
CSDE1-206ENST00000483030 SDHAF2Q9NX18 166 aa5.54□□□□□ -1.52
CSDE1-206ENST00000483030 TECRQ9NZ01 308 aaKnown RBP5.54□□□□□ -1.52
CSDE1-206ENST00000483030 MGAT4AQ9UM21 535 aa5.54□□□□□ -1.52
CSDE1-206ENST00000483030 ALMS1Q8TCU4 4167 aa5.53□□□□□ -1.52
CSDE1-206ENST00000483030 ELOA3CA0A087WX78 387 aaPredicted RBP5.53□□□□□ -1.52
CSDE1-206ENST00000483030 TRBV9A0A0B4J1U6 114 aa5.53□□□□□ -1.52
CSDE1-206ENST00000483030 A0A0J9YWU9 116 aa5.53□□□□□ -1.52
CSDE1-206ENST00000483030 EFCAB10A6NFE3 127 aa5.53□□□□□ -1.52
CSDE1-206ENST00000483030 FAM223BA6NKX1 122 aa5.53□□□□□ -1.52
CSDE1-206ENST00000483030 TRDCB7Z8K6 153 aa5.53□□□□□ -1.52
CSDE1-206ENST00000483030 PPP5D1E7EU14 171 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms