RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 FAM25GB3EWG6 89 aa10.78□□□□□ -0.68
VARS-225ENST00000482996 ARPC1BO15143 372 aaKnown RBP10.78□□□□□ -0.68
VARS-225ENST00000482996 CREBL2O60519 120 aaPredicted RBP10.78□□□□□ -0.68
VARS-225ENST00000482996 FCGR3BO75015 233 aa10.78□□□□□ -0.68
VARS-225ENST00000482996 LGALS1P09382 135 aaKnown RBP10.78□□□□□ -0.68
VARS-225ENST00000482996 FCGR2CP31995 323 aa10.78□□□□□ -0.68
VARS-225ENST00000482996 TPPP2P59282 170 aa10.78□□□□□ -0.68
VARS-225ENST00000482996 KRTAP10-11P60412 298 aa10.78□□□□□ -0.68
VARS-225ENST00000482996 PJVKQ0ZLH3 352 aa10.78□□□□□ -0.68
VARS-225ENST00000482996 SPANXN2Q5MJ10 180 aa10.78□□□□□ -0.68
VARS-225ENST00000482996 TMEM69Q5SWH9 247 aa10.78□□□□□ -0.68
VARS-225ENST00000482996 C9orf66Q5T8R8 295 aa10.78□□□□□ -0.68
VARS-225ENST00000482996 LINC00299Q6ZSB3 139 aa10.78□□□□□ -0.68
VARS-225ENST00000482996 CASTOR1Q8WTX7 329 aa10.78□□□□□ -0.68
VARS-225ENST00000482996 TCTEX1D2Q8WW35 142 aa10.78□□□□□ -0.68
VARS-225ENST00000482996 S100ZQ8WXG8 99 aa10.78□□□□□ -0.68
VARS-225ENST00000482996 MS4A10Q96PG2 267 aa10.78□□□□□ -0.68
VARS-225ENST00000482996 ZNF355PQ9NSJ1 428 aa10.78□□□□□ -0.68
VARS-225ENST00000482996 COMMD3Q9UBI1 195 aa10.78□□□□□ -0.68
VARS-225ENST00000482996 SEC14L6B5MCN3 397 aa10.77□□□□□ -0.69
VARS-225ENST00000482996 H3BUA1 57 aa10.77□□□□□ -0.69
VARS-225ENST00000482996 TRGV3P03979 118 aa10.77□□□□□ -0.69
VARS-225ENST00000482996 PTHLHP12272 177 aa10.77□□□□□ -0.69
VARS-225ENST00000482996 AADACP22760 399 aa10.77□□□□□ -0.69
VARS-225ENST00000482996 TAS2R20P59543 309 aa10.77□□□□□ -0.69
VARS-225ENST00000482996 MSMO1Q15800 293 aa10.77□□□□□ -0.69
VARS-225ENST00000482996 PRSS8Q16651 343 aa10.77□□□□□ -0.69
VARS-225ENST00000482996 ZNF66Q6ZN08 573 aa10.77□□□□□ -0.69
VARS-225ENST00000482996 OVCH2Q7RTZ1 564 aa10.77□□□□□ -0.69
VARS-225ENST00000482996 POC5Q8NA72 575 aa10.77□□□□□ -0.69
VARS-225ENST00000482996 OR5T1Q8NG75 326 aa10.77□□□□□ -0.69
VARS-225ENST00000482996 OR4S2Q8NH73 311 aa10.77□□□□□ -0.69
VARS-225ENST00000482996 SECTM1Q8WVN6 248 aa10.77□□□□□ -0.69
VARS-225ENST00000482996 PHB2Q99623 299 aa10.77□□□□□ -0.69
VARS-225ENST00000482996 TNCP24821 2201 aa10.77□□□□□ -0.69
VARS-225ENST00000482996 MEIS3P1A6NDR6 274 aa10.76□□□□□ -0.69
VARS-225ENST00000482996 LINC01619G3V211 115 aa10.76□□□□□ -0.69
VARS-225ENST00000482996 K7EIL1 84 aa10.76□□□□□ -0.69
VARS-225ENST00000482996 ACTL6BO94805 426 aa10.76□□□□□ -0.69
VARS-225ENST00000482996 PPYP01298 95 aa10.76□□□□□ -0.69
VARS-225ENST00000482996 IGLV2-14P01704 120 aa10.76□□□□□ -0.69
VARS-225ENST00000482996 FCER2P06734 321 aa10.76□□□□□ -0.69
VARS-225ENST00000482996 KIR2DS2P43631 304 aa10.76□□□□□ -0.69
VARS-225ENST00000482996 RPL30P62888 115 aaKnown RBP10.76□□□□□ -0.69
VARS-225ENST00000482996 SSBP2P81877 361 aaPredicted RBP10.76□□□□□ -0.69
VARS-225ENST00000482996 DGCR2P98153 550 aa10.76□□□□□ -0.69
VARS-225ENST00000482996 CDK10Q15131 360 aa10.76□□□□□ -0.69
VARS-225ENST00000482996 TNXAQ16473 311 aa10.76□□□□□ -0.69
VARS-225ENST00000482996 OR2B11Q5JQS5 317 aa10.76□□□□□ -0.69
VARS-225ENST00000482996 MFSD4AQ8N468 514 aa10.76□□□□□ -0.69
VARS-225ENST00000482996 ZBTB34Q8NCN2 500 aa10.76□□□□□ -0.69
VARS-225ENST00000482996 OR5AP2Q8NGF4 316 aa10.76□□□□□ -0.69
VARS-225ENST00000482996 SNAPC3Q92966 411 aa10.76□□□□□ -0.69
VARS-225ENST00000482996 WDR12Q9GZL7 423 aaKnown RBP10.76□□□□□ -0.69
VARS-225ENST00000482996 NXF2Q9GZY0 626 aaKnown RBP10.76□□□□□ -0.69
VARS-225ENST00000482996 TAS2R8Q9NYW2 309 aa10.76□□□□□ -0.69
VARS-225ENST00000482996 A0A0G2JLM5 398 aa10.75□□□□□ -0.69
VARS-225ENST00000482996 C13orf42A0A1B0GVH6 325 aa10.75□□□□□ -0.69
VARS-225ENST00000482996 WI2-2373I1.2A0A1W2PRP0 233 aa10.75□□□□□ -0.69
VARS-225ENST00000482996 MPPED1O15442 326 aa10.75□□□□□ -0.69
VARS-225ENST00000482996 RAMP3O60896 148 aa10.75□□□□□ -0.69
VARS-225ENST00000482996 IGHV3-11P01762 117 aa10.75□□□□□ -0.69
VARS-225ENST00000482996 SAA1P0DJI8 122 aaPredicted RBP10.75□□□□□ -0.69
VARS-225ENST00000482996 PRSS3P35030 304 aa10.75□□□□□ -0.69
VARS-225ENST00000482996 HERV-K104P61576 105 aa10.75□□□□□ -0.69
VARS-225ENST00000482996 DCTN2Q13561 401 aaKnown RBP10.75□□□□□ -0.69
VARS-225ENST00000482996 DEFB121Q5J5C9 76 aa10.75□□□□□ -0.69
VARS-225ENST00000482996 ASPHD1Q5U4P2 390 aa10.75□□□□□ -0.69
VARS-225ENST00000482996 IDO2Q6ZQW0 420 aa10.75□□□□□ -0.69
VARS-225ENST00000482996 MMD2Q8IY49 270 aa10.75□□□□□ -0.69
VARS-225ENST00000482996 OR6Q1Q8NGQ2 317 aa10.75□□□□□ -0.69
VARS-225ENST00000482996 VSTM2AQ8TAG5 236 aa10.75□□□□□ -0.69
VARS-225ENST00000482996 GIMAP1Q8WWP7 306 aa10.75□□□□□ -0.69
VARS-225ENST00000482996 CMTM3Q96MX0 182 aa10.75□□□□□ -0.69
VARS-225ENST00000482996 SLC5A7Q9GZV3 580 aa10.75□□□□□ -0.69
VARS-225ENST00000482996 ALX4Q9H161 411 aaPredicted RBP10.75□□□□□ -0.69
VARS-225ENST00000482996 CCL28Q9NRJ3 127 aa10.75□□□□□ -0.69
VARS-225ENST00000482996 MSGN1A6NI15 193 aa10.74□□□□□ -0.69
VARS-225ENST00000482996 OVOL1O14753 267 aa10.74□□□□□ -0.69
VARS-225ENST00000482996 HRASP01112 189 aa10.74□□□□□ -0.69
VARS-225ENST00000482996 APOA1P02647 267 aa10.74□□□□□ -0.69
VARS-225ENST00000482996 HSPB1P04792 205 aaKnown RBP10.74□□□□□ -0.69
VARS-225ENST00000482996 INSL3P51460 131 aa10.74□□□□□ -0.69
VARS-225ENST00000482996 TAS2R46P59540 309 aa10.74□□□□□ -0.69
VARS-225ENST00000482996 FXYD4P59646 89 aa10.74□□□□□ -0.69
VARS-225ENST00000482996 EIF4EBP1Q13541 118 aaPredicted RBP10.74□□□□□ -0.69
VARS-225ENST00000482996 ZNF846Q147U1 533 aa10.74□□□□□ -0.69
VARS-225ENST00000482996 SRSF12Q8WXF0 261 aaKnown RBP10.74□□□□□ -0.69
VARS-225ENST00000482996 BORCS5Q969J3 196 aa10.74□□□□□ -0.69
VARS-225ENST00000482996 DIRAS2Q96HU8 199 aa10.74□□□□□ -0.69
VARS-225ENST00000482996 RHOVQ96L33 236 aa10.74□□□□□ -0.69
VARS-225ENST00000482996 SPIN2AQ99865 258 aa10.74□□□□□ -0.69
VARS-225ENST00000482996 SPIN2BQ9BPZ2 258 aa10.74□□□□□ -0.69
VARS-225ENST00000482996 ZNF430Q9H8G1 570 aaPredicted RBP10.74□□□□□ -0.69
VARS-225ENST00000482996 COA4Q9NYJ1 87 aa10.74□□□□□ -0.69
VARS-225ENST00000482996 EHFQ9NZC4 300 aa10.74□□□□□ -0.69
VARS-225ENST00000482996 IGHV4OR15-8A0A075B7B6 117 aa10.73□□□□□ -0.69
VARS-225ENST00000482996 A0A087WW49 117 aa10.73□□□□□ -0.69
VARS-225ENST00000482996 CTDSP2O14595 271 aa10.73□□□□□ -0.69
VARS-225ENST00000482996 TNFSF12O43508 249 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms