RNA–Protein interactions for RNA: ENST00000482722.5

COL9A2-207, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 2,887 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-207ENST00000482722 COX5AP20674 150 aa12□□□□□ -0.49
COL9A2-207ENST00000482722 GFRA1P56159 465 aa12□□□□□ -0.49
COL9A2-207ENST00000482722 SFRP2Q96HF1 295 aa12□□□□□ -0.49
COL9A2-207ENST00000482722 PRDM14Q9GZV8 571 aa12□□□□□ -0.49
COL9A2-207ENST00000482722 APC2O95996 2303 aa12□□□□□ -0.49
COL9A2-207ENST00000482722 TRAV24A0A0B4J272 114 aa12□□□□□ -0.49
COL9A2-207ENST00000482722 TMPRSS2O15393 492 aa12□□□□□ -0.49
COL9A2-207ENST00000482722 HNF1AP20823 631 aa12□□□□□ -0.49
COL9A2-207ENST00000482722 ZNF709Q8N972 641 aa12□□□□□ -0.49
COL9A2-207ENST00000482722 MAGEA5P43359 124 aa11.99□□□□□ -0.49
COL9A2-207ENST00000482722 SPINK9Q5DT21 86 aa11.99□□□□□ -0.49
COL9A2-207ENST00000482722 TMPRSS7Q7RTY8 843 aa11.99□□□□□ -0.49
COL9A2-207ENST00000482722 OR1L1Q8NH94 360 aa11.99□□□□□ -0.49
COL9A2-207ENST00000482722 SPSB4Q96A44 273 aa11.99□□□□□ -0.49
COL9A2-207ENST00000482722 SAMD10Q9BYL1 202 aa11.99□□□□□ -0.49
COL9A2-207ENST00000482722 SPRY4Q9C004 299 aa11.99□□□□□ -0.49
COL9A2-207ENST00000482722 C12orf49Q9H741 205 aa11.99□□□□□ -0.49
COL9A2-207ENST00000482722 FBXL7Q9UJT9 491 aa11.99□□□□□ -0.49
COL9A2-207ENST00000482722 BOKQ9UMX3 212 aaPredicted RBP11.99□□□□□ -0.49
COL9A2-207ENST00000482722 WIPI2Q9Y4P8 454 aa11.99□□□□□ -0.49
COL9A2-207ENST00000482722 NBASA2RRP1 2371 aa11.99□□□□□ -0.49
COL9A2-207ENST00000482722 PIGBOS1A0A0B4J2F0 54 aa11.99□□□□□ -0.49
COL9A2-207ENST00000482722 CCL25O15444 150 aa11.99□□□□□ -0.49
COL9A2-207ENST00000482722 RHBDL1O75783 438 aa11.99□□□□□ -0.49
COL9A2-207ENST00000482722 ESDP10768 282 aa11.99□□□□□ -0.49
COL9A2-207ENST00000482722 RPP30P78346 268 aaKnown RBP11.99□□□□□ -0.49
COL9A2-207ENST00000482722 BAGE3Q86Y29 109 aa11.99□□□□□ -0.49
COL9A2-207ENST00000482722 BAGE2Q86Y30 109 aa11.99□□□□□ -0.49
COL9A2-207ENST00000482722 DEFB124Q8NES8 71 aa11.99□□□□□ -0.49
COL9A2-207ENST00000482722 TECTBQ96PL2 329 aa11.99□□□□□ -0.49
COL9A2-207ENST00000482722 FAM103A1Q9BTL3 118 aaKnown RBP11.99□□□□□ -0.49
COL9A2-207ENST00000482722 TMEM147Q9BVK8 224 aa11.99□□□□□ -0.49
COL9A2-207ENST00000482722 CLN8Q9UBY8 286 aa11.99□□□□□ -0.49
COL9A2-207ENST00000482722 TRBV20OR9-2A0A075B6H5 130 aa11.98□□□□□ -0.49
COL9A2-207ENST00000482722 MDFIC2A0A1B0GVS7 189 aa11.98□□□□□ -0.49
COL9A2-207ENST00000482722 C20orf202A1L168 122 aa11.98□□□□□ -0.49
COL9A2-207ENST00000482722 WISP2O76076 250 aa11.98□□□□□ -0.49
COL9A2-207ENST00000482722 KRASP01116 189 aa11.98□□□□□ -0.49
COL9A2-207ENST00000482722 COTL1Q14019 142 aa11.98□□□□□ -0.49
COL9A2-207ENST00000482722 CEACAM21Q3KPI0 293 aa11.98□□□□□ -0.49
COL9A2-207ENST00000482722 FAM53AQ6NSI3 398 aaPredicted RBP11.98□□□□□ -0.49
COL9A2-207ENST00000482722 NPCDR1Q9BY65 106 aa11.98□□□□□ -0.49
COL9A2-207ENST00000482722 MRPL18Q9H0U6 180 aaKnown RBP11.98□□□□□ -0.49
COL9A2-207ENST00000482722 GTF3C1Q12789 2109 aa11.98□□□□□ -0.49
COL9A2-207ENST00000482722 F6UZH7 168 aa11.98□□□□□ -0.49
COL9A2-207ENST00000482722 SERPINA7P05543 415 aa11.98□□□□□ -0.49
COL9A2-207ENST00000482722 KITLGP21583 273 aa11.98□□□□□ -0.49
COL9A2-207ENST00000482722 THBS3P49746 956 aa11.98□□□□□ -0.49
COL9A2-207ENST00000482722 KRTDAPP60985 99 aa11.98□□□□□ -0.49
COL9A2-207ENST00000482722 ROS1P08922 2347 aa11.98□□□□□ -0.49
COL9A2-207ENST00000482722 ZZEF1O43149 2961 aa11.97□□□□□ -0.49
COL9A2-207ENST00000482722 NEURL1O76050 574 aa11.97□□□□□ -0.49
COL9A2-207ENST00000482722 SYNGR4O95473 234 aa11.97□□□□□ -0.49
COL9A2-207ENST00000482722 OR5G3P0C626 314 aa11.97□□□□□ -0.49
COL9A2-207ENST00000482722 CDC34P49427 236 aaPredicted RBP11.97□□□□□ -0.49
COL9A2-207ENST00000482722 PTTG1IPP53801 180 aa11.97□□□□□ -0.49
COL9A2-207ENST00000482722 TMEM164Q5U3C3 297 aa11.97□□□□□ -0.49
COL9A2-207ENST00000482722 MED12LQ86YW9 2145 aa11.97□□□□□ -0.49
COL9A2-207ENST00000482722 Q8N976 141 aa11.97□□□□□ -0.49
COL9A2-207ENST00000482722 PDE6DO43924 150 aa11.97□□□□□ -0.49
COL9A2-207ENST00000482722 RAMP3O60896 148 aa11.97□□□□□ -0.49
COL9A2-207ENST00000482722 FRMD6-AS1P0C7T7 363 aa11.97□□□□□ -0.49
COL9A2-207ENST00000482722 CA6P23280 308 aa11.97□□□□□ -0.49
COL9A2-207ENST00000482722 HOXA4Q00056 320 aaPredicted RBP11.97□□□□□ -0.49
COL9A2-207ENST00000482722 GCSAMLQ5JQS6 135 aa11.97□□□□□ -0.49
COL9A2-207ENST00000482722 COLCA1Q6ZS62 124 aa11.97□□□□□ -0.49
COL9A2-207ENST00000482722 Q6ZVH6 145 aa11.97□□□□□ -0.49
COL9A2-207ENST00000482722 FGFRL1Q8N441 504 aa11.97□□□□□ -0.49
COL9A2-207ENST00000482722 OR2M7Q8NG81 312 aa11.97□□□□□ -0.49
COL9A2-207ENST00000482722 OR4B1Q8NGF8 309 aa11.97□□□□□ -0.49
COL9A2-207ENST00000482722 C22orf15Q8WYQ4 148 aa11.97□□□□□ -0.49
COL9A2-207ENST00000482722 APOBEC3DQ96AK3 386 aaPredicted RBP11.97□□□□□ -0.49
COL9A2-207ENST00000482722 SIRPB1O00241 398 aa11.97□□□□□ -0.49
COL9A2-207ENST00000482722 IGHEP01854 428 aa11.97□□□□□ -0.49
COL9A2-207ENST00000482722 PLGLB1Q02325 96 aa11.97□□□□□ -0.49
COL9A2-207ENST00000482722 ZNF90Q03938 601 aa11.97□□□□□ -0.49
COL9A2-207ENST00000482722 TRIP6Q15654 476 aaKnown RBP11.97□□□□□ -0.49
COL9A2-207ENST00000482722 SPATA45Q537H7 98 aa11.97□□□□□ -0.49
COL9A2-207ENST00000482722 SAPCD1Q5SSQ6 148 aa11.97□□□□□ -0.49
COL9A2-207ENST00000482722 ABHD17BQ5VST6 288 aa11.97□□□□□ -0.49
COL9A2-207ENST00000482722 APH1AQ96BI3 265 aa11.97□□□□□ -0.49
COL9A2-207ENST00000482722 TMEM204Q9BSN7 226 aa11.97□□□□□ -0.49
COL9A2-207ENST00000482722 DLL3Q9NYJ7 618 aa11.97□□□□□ -0.49
COL9A2-207ENST00000482722 CADP27708 2225 aa11.96□□□□□ -0.49
COL9A2-207ENST00000482722 TRAV38-1A0A0B4J264 116 aa11.96□□□□□ -0.49
COL9A2-207ENST00000482722 AQP7O14520 342 aa11.96□□□□□ -0.49
COL9A2-207ENST00000482722 SH2D1BO14796 132 aa11.96□□□□□ -0.49
COL9A2-207ENST00000482722 G6PCP35575 357 aa11.96□□□□□ -0.49
COL9A2-207ENST00000482722 CTRLP40313 264 aa11.96□□□□□ -0.49
COL9A2-207ENST00000482722 LEMD1Q68G75 181 aa11.96□□□□□ -0.49
COL9A2-207ENST00000482722 SLC45A2Q9UMX9 530 aa11.96□□□□□ -0.49
COL9A2-207ENST00000482722 BSNQ9UPA5 3926 aa11.96□□□□□ -0.49
COL9A2-207ENST00000482722 PMS2P5A8MQ11 134 aa11.96□□□□□ -0.5
COL9A2-207ENST00000482722 DIRC3C9JPN6 131 aa11.96□□□□□ -0.5
COL9A2-207ENST00000482722 PLP2Q04941 152 aa11.96□□□□□ -0.5
COL9A2-207ENST00000482722 ZNF816Q0VGE8 651 aaPredicted RBP11.96□□□□□ -0.5
COL9A2-207ENST00000482722 ATP6V1FQ16864 119 aa11.96□□□□□ -0.5
COL9A2-207ENST00000482722 MCEMP1Q8IX19 187 aa11.96□□□□□ -0.5
COL9A2-207ENST00000482722 ZDHHC16Q969W1 377 aa11.96□□□□□ -0.5
COL9A2-207ENST00000482722 ZNF703Q9H7S9 590 aaPredicted RBP11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms