RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 DEFA5Q01523 94 aa6.4□□□□□ -1.38
SNX13-208ENST00000482558 EWSR1Q01844 656 aaKnown RBP eCLIP6.4□□□□□ -1.38
SNX13-208ENST00000482558 TMEM30BQ3MIR4 351 aa6.4□□□□□ -1.38
SNX13-208ENST00000482558 ZNF66Q6ZN08 573 aa6.4□□□□□ -1.38
SNX13-208ENST00000482558 ACP7Q6ZNF0 438 aa6.4□□□□□ -1.38
SNX13-208ENST00000482558 WDR86Q86TI4 376 aa6.4□□□□□ -1.38
SNX13-208ENST00000482558 ZNF645Q8N7E2 425 aa6.4□□□□□ -1.38
SNX13-208ENST00000482558 RNASE11Q8TAA1 199 aaKnown RBP6.4□□□□□ -1.38
SNX13-208ENST00000482558 COQ2Q96H96 371 aa6.4□□□□□ -1.38
SNX13-208ENST00000482558 OR51B6Q9H340 312 aa6.4□□□□□ -1.38
SNX13-208ENST00000482558 SLC25A15Q9Y619 301 aa6.4□□□□□ -1.38
SNX13-208ENST00000482558 KPTNQ9Y664 436 aa6.4□□□□□ -1.38
SNX13-208ENST00000482558 ZNF318Q5VUA4 2279 aa6.39□□□□□ -1.39
SNX13-208ENST00000482558 IGKV1D-13A0A0B4J2D9 117 aa6.39□□□□□ -1.39
SNX13-208ENST00000482558 MARCH11A6NNE9 402 aa6.39□□□□□ -1.39
SNX13-208ENST00000482558 RNASEK-C17orf49H0YIS7 233 aa6.39□□□□□ -1.39
SNX13-208ENST00000482558 HSPB6O14558 160 aa6.39□□□□□ -1.39
SNX13-208ENST00000482558 ABCD4O14678 606 aa6.39□□□□□ -1.39
SNX13-208ENST00000482558 SOX15O60248 233 aa6.39□□□□□ -1.39
SNX13-208ENST00000482558 IFNA5P01569 189 aa6.39□□□□□ -1.39
SNX13-208ENST00000482558 IGHV3-13P01766 116 aa6.39□□□□□ -1.39
SNX13-208ENST00000482558 HBE1P02100 147 aa6.39□□□□□ -1.39
SNX13-208ENST00000482558 PRH1P02810 166 aa6.39□□□□□ -1.39
SNX13-208ENST00000482558 CD5P06127 495 aa6.39□□□□□ -1.39
SNX13-208ENST00000482558 OR8U8P0C7N1 319 aa6.39□□□□□ -1.39
SNX13-208ENST00000482558 IGKV1-13P0DP09 117 aa6.39□□□□□ -1.39
SNX13-208ENST00000482558 RCC1P18754 421 aaPredicted RBP6.39□□□□□ -1.39
SNX13-208ENST00000482558 CEACAM6P40199 344 aa6.39□□□□□ -1.39
SNX13-208ENST00000482558 SULT1A1P50225 295 aa6.39□□□□□ -1.39
SNX13-208ENST00000482558 BTN1A1Q13410 526 aa6.39□□□□□ -1.39
SNX13-208ENST00000482558 VWA1Q6PCB0 445 aa6.39□□□□□ -1.39
SNX13-208ENST00000482558 WDR82Q6UXN9 313 aa6.39□□□□□ -1.39
SNX13-208ENST00000482558 Q6ZRG5 221 aa6.39□□□□□ -1.39
SNX13-208ENST00000482558 TMEM252Q8N6L7 170 aa6.39□□□□□ -1.39
SNX13-208ENST00000482558 SSMEM1Q8WWF3 244 aa6.39□□□□□ -1.39
SNX13-208ENST00000482558 IL1F10Q8WWZ1 152 aa6.39□□□□□ -1.39
SNX13-208ENST00000482558 ZNF488Q96MN9 340 aa6.39□□□□□ -1.39
SNX13-208ENST00000482558 HSD17B10Q99714 261 aaKnown RBP6.39□□□□□ -1.39
SNX13-208ENST00000482558 PARD6GQ9BYG4 376 aaPredicted RBP6.39□□□□□ -1.39
SNX13-208ENST00000482558 ELOVL5Q9NYP7 299 aa6.39□□□□□ -1.39
SNX13-208ENST00000482558 IL36RNQ9UBH0 155 aa6.39□□□□□ -1.39
SNX13-208ENST00000482558 TINAGQ9UJW2 476 aa6.39□□□□□ -1.39
SNX13-208ENST00000482558 GAB2Q9UQC2 676 aa6.39□□□□□ -1.39
SNX13-208ENST00000482558 TNFRSF18Q9Y5U5 241 aa6.39□□□□□ -1.39
SNX13-208ENST00000482558 FAM186AA6NE01 2351 aa6.38□□□□□ -1.39
SNX13-208ENST00000482558 TRAV25A0A0B4J276 109 aa6.38□□□□□ -1.39
SNX13-208ENST00000482558 IGHV1-18A0A0C4DH31 117 aa6.38□□□□□ -1.39
SNX13-208ENST00000482558 ITGB1BP1O14713 200 aa6.38□□□□□ -1.39
SNX13-208ENST00000482558 CHEK1O14757 476 aa6.38□□□□□ -1.39
SNX13-208ENST00000482558 MLNRO43193 412 aa6.38□□□□□ -1.39
SNX13-208ENST00000482558 SSSCA1O60232 199 aa6.38□□□□□ -1.39
SNX13-208ENST00000482558 NDUFB4O95168 129 aa6.38□□□□□ -1.39
SNX13-208ENST00000482558 NPSP0C0P6 89 aa6.38□□□□□ -1.39
SNX13-208ENST00000482558 OR8U9P0C7N5 309 aa6.38□□□□□ -1.39
SNX13-208ENST00000482558 WT1P19544 449 aaPredicted RBP6.38□□□□□ -1.39
SNX13-208ENST00000482558 CEACAM8P31997 349 aaPredicted RBP6.38□□□□□ -1.39
SNX13-208ENST00000482558 MPV17P39210 176 aa6.38□□□□□ -1.39
SNX13-208ENST00000482558 LPAR6P43657 344 aa6.38□□□□□ -1.39
SNX13-208ENST00000482558 AKR1C2P52895 323 aa6.38□□□□□ -1.39
SNX13-208ENST00000482558 KLF3P57682 345 aaPredicted RBP6.38□□□□□ -1.39
SNX13-208ENST00000482558 TLE4Q04727 773 aa6.38□□□□□ -1.39
SNX13-208ENST00000482558 ATP6V1FQ16864 119 aa6.38□□□□□ -1.39
SNX13-208ENST00000482558 BEAN1Q3B7T3 259 aa6.38□□□□□ -1.39
SNX13-208ENST00000482558 KRTAP15-1Q3LI76 137 aa6.38□□□□□ -1.39
SNX13-208ENST00000482558 IL17RELQ6ZVW7 336 aa6.38□□□□□ -1.39
SNX13-208ENST00000482558 C11orf53Q8IXP5 236 aa6.38□□□□□ -1.39
SNX13-208ENST00000482558 OR51H1Q8NH63 302 aa6.38□□□□□ -1.39
SNX13-208ENST00000482558 IL17DQ8TAD2 202 aa6.38□□□□□ -1.39
SNX13-208ENST00000482558 PLPPR1Q8TBJ4 325 aa6.38□□□□□ -1.39
SNX13-208ENST00000482558 FAM57AQ8TBR7 257 aa6.38□□□□□ -1.39
SNX13-208ENST00000482558 RBMXL1Q96E39 390 aaKnown RBP6.38□□□□□ -1.39
SNX13-208ENST00000482558 CYYR1Q96J86 154 aa6.38□□□□□ -1.39
SNX13-208ENST00000482558 CIB3Q96Q77 187 aaPredicted RBP6.38□□□□□ -1.39
SNX13-208ENST00000482558 ATP5SQ99766 215 aa6.38□□□□□ -1.39
SNX13-208ENST00000482558 C1QTNF6Q9BXI9 259 aa6.38□□□□□ -1.39
SNX13-208ENST00000482558 GEMIN7Q9H840 131 aaKnown RBP6.38□□□□□ -1.39
SNX13-208ENST00000482558 GSN-AS1Q9NRJ2 163 aa6.38□□□□□ -1.39
SNX13-208ENST00000482558 C19orf12Q9NSK7 152 aa6.38□□□□□ -1.39
SNX13-208ENST00000482558 KCNS2Q9ULS6 477 aa6.38□□□□□ -1.39
SNX13-208ENST00000482558 RNF115Q9Y4L5 304 aa6.38□□□□□ -1.39
SNX13-208ENST00000482558 PTPRBP23467 1997 aa6.38□□□□□ -1.39
SNX13-208ENST00000482558 DOCK7Q96N67 2140 aa6.38□□□□□ -1.39
SNX13-208ENST00000482558 A0A1W2PR80 420 aa6.37□□□□□ -1.39
SNX13-208ENST00000482558 SRRM5B3KS81 715 aa6.37□□□□□ -1.39
SNX13-208ENST00000482558 MGST3O14880 152 aa6.37□□□□□ -1.39
SNX13-208ENST00000482558 SYNGR2O43760 224 aa6.37□□□□□ -1.39
SNX13-208ENST00000482558 CHST1O43916 411 aa6.37□□□□□ -1.39
SNX13-208ENST00000482558 NDUFS6O75380 124 aaKnown RBP6.37□□□□□ -1.39
SNX13-208ENST00000482558 SCO1O75880 301 aa6.37□□□□□ -1.39
SNX13-208ENST00000482558 PSG2P11465 335 aa6.37□□□□□ -1.39
SNX13-208ENST00000482558 PAX6P26367 422 aa6.37□□□□□ -1.39
SNX13-208ENST00000482558 SNCAP37840 140 aa6.37□□□□□ -1.39
SNX13-208ENST00000482558 KIR2DS2P43631 304 aa6.37□□□□□ -1.39
SNX13-208ENST00000482558 FABP6P51161 128 aa6.37□□□□□ -1.39
SNX13-208ENST00000482558 SEC61GP60059 68 aa6.37□□□□□ -1.39
SNX13-208ENST00000482558 POLR2GP62487 172 aaKnown RBP eCLIP6.37□□□□□ -1.39
SNX13-208ENST00000482558 HERV-K104P63124 156 aa6.37□□□□□ -1.39
SNX13-208ENST00000482558 SERF2P84101 59 aa6.37□□□□□ -1.39
SNX13-208ENST00000482558 FOXF2Q12947 444 aa6.37□□□□□ -1.39
SNX13-208ENST00000482558 MYPOPQ86VE0 399 aaPredicted RBP6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms