RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 TANC2Q9HCD6 1990 aa11.96□□□□□ -0.5
CHD3-211ENST00000481999 C17orf100A8MU93 164 aa11.95□□□□□ -0.5
CHD3-211ENST00000481999 TMPRSS2O15393 492 aa11.95□□□□□ -0.5
CHD3-211ENST00000481999 PPIHO43447 177 aaKnown RBP11.95□□□□□ -0.5
CHD3-211ENST00000481999 KRASP01116 189 aa11.95□□□□□ -0.5
CHD3-211ENST00000481999 G6PCP35575 357 aa11.95□□□□□ -0.5
CHD3-211ENST00000481999 CA7P43166 264 aa11.95□□□□□ -0.5
CHD3-211ENST00000481999 CTAG1AP78358 180 aa11.95□□□□□ -0.5
CHD3-211ENST00000481999 ADORA2A-AS1P86434 159 aa11.95□□□□□ -0.5
CHD3-211ENST00000481999 ARL16Q0P5N6 197 aa11.95□□□□□ -0.5
CHD3-211ENST00000481999 LRRC75BQ2VPJ9 315 aa11.95□□□□□ -0.5
CHD3-211ENST00000481999 TCF23Q7RTU1 214 aa11.95□□□□□ -0.5
CHD3-211ENST00000481999 ZNF645Q8N7E2 425 aa11.95□□□□□ -0.5
CHD3-211ENST00000481999 SEBOXQ9HB31 216 aaPredicted RBP11.95□□□□□ -0.5
CHD3-211ENST00000481999 CISD1Q9NZ45 108 aaKnown RBP11.95□□□□□ -0.5
CHD3-211ENST00000481999 GNG12Q9UBI6 72 aa11.95□□□□□ -0.5
CHD3-211ENST00000481999 MMP24Q9Y5R2 645 aa11.95□□□□□ -0.5
CHD3-211ENST00000481999 MMP23AO75900 390 aa11.95□□□□□ -0.5
CHD3-211ENST00000481999 RPL39P5Q59GN2 51 aa11.95□□□□□ -0.5
CHD3-211ENST00000481999 STUMQ69YW2 141 aa11.95□□□□□ -0.5
CHD3-211ENST00000481999 ZNF787Q6DD87 383 aa11.95□□□□□ -0.5
CHD3-211ENST00000481999 HAPLN4Q86UW8 402 aa11.95□□□□□ -0.5
CHD3-211ENST00000481999 TCTEX1D2Q8WW35 142 aa11.95□□□□□ -0.5
CHD3-211ENST00000481999 GAFA1Q96PS6 74 aa11.95□□□□□ -0.5
CHD3-211ENST00000481999 B4DEV8 164 aa11.94□□□□□ -0.5
CHD3-211ENST00000481999 MGST3O14880 152 aa11.94□□□□□ -0.5
CHD3-211ENST00000481999 BCL2P10415 239 aa11.94□□□□□ -0.5
CHD3-211ENST00000481999 NQO2P16083 231 aa11.94□□□□□ -0.5
CHD3-211ENST00000481999 RBMS3Q6XE24 437 aaKnown RBP11.94□□□□□ -0.5
CHD3-211ENST00000481999 PINX1Q96BK5 328 aaKnown RBP11.94□□□□□ -0.5
CHD3-211ENST00000481999 SNX22Q96L94 193 aa11.94□□□□□ -0.5
CHD3-211ENST00000481999 MED13LQ71F56 2210 aa11.94□□□□□ -0.5
CHD3-211ENST00000481999 HCFC1P51610 2035 aa11.94□□□□□ -0.5
CHD3-211ENST00000481999 ZNF727A8MUV8 499 aa11.94□□□□□ -0.5
CHD3-211ENST00000481999 LYNX1G3V0Z9 82 aa11.94□□□□□ -0.5
CHD3-211ENST00000481999 S1PR2O95136 353 aa11.94□□□□□ -0.5
CHD3-211ENST00000481999 LYNX1P0DP58 116 aa11.94□□□□□ -0.5
CHD3-211ENST00000481999 RPS10P46783 165 aaKnown RBP11.94□□□□□ -0.5
CHD3-211ENST00000481999 SPANXN5Q5MJ07 72 aa11.94□□□□□ -0.5
CHD3-211ENST00000481999 WDR61Q9GZS3 305 aaKnown RBP11.94□□□□□ -0.5
CHD3-211ENST00000481999 SAP30LQ9HAJ7 183 aa11.94□□□□□ -0.5
CHD3-211ENST00000481999 KMT2BQ9UMN6 2715 aaPredicted RBP11.93□□□□□ -0.5
CHD3-211ENST00000481999 LOXL3P58215 753 aa11.93□□□□□ -0.5
CHD3-211ENST00000481999 B2MP61769 119 aa11.93□□□□□ -0.5
CHD3-211ENST00000481999 MSMO1Q15800 293 aa11.93□□□□□ -0.5
CHD3-211ENST00000481999 SPINK9Q5DT21 86 aa11.93□□□□□ -0.5
CHD3-211ENST00000481999 LCN15Q6UWW0 184 aa11.93□□□□□ -0.5
CHD3-211ENST00000481999 NANPQ8TBE9 248 aa11.93□□□□□ -0.5
CHD3-211ENST00000481999 LURAP1Q96LR2 239 aa11.93□□□□□ -0.5
CHD3-211ENST00000481999 ZNF251Q9BRH9 671 aa11.93□□□□□ -0.5
CHD3-211ENST00000481999 ZFP92A6NM28 416 aa11.93□□□□□ -0.5
CHD3-211ENST00000481999 SPINT2O43291 252 aa11.93□□□□□ -0.5
CHD3-211ENST00000481999 CLDN14O95500 239 aa11.93□□□□□ -0.5
CHD3-211ENST00000481999 RAB11AP62491 216 aa11.93□□□□□ -0.5
CHD3-211ENST00000481999 TNFRSF9Q07011 255 aa11.93□□□□□ -0.5
CHD3-211ENST00000481999 EIF4EBP1Q13541 118 aaPredicted RBP11.93□□□□□ -0.5
CHD3-211ENST00000481999 ELOBQ15370 118 aa11.93□□□□□ -0.5
CHD3-211ENST00000481999 ZNF726P1Q15940 193 aa11.93□□□□□ -0.5
CHD3-211ENST00000481999 TMEM41BQ5BJD5 291 aa11.93□□□□□ -0.5
CHD3-211ENST00000481999 RCC1LQ96I51 464 aaKnown RBP11.93□□□□□ -0.5
CHD3-211ENST00000481999 OR4C12Q96R67 309 aa11.93□□□□□ -0.5
CHD3-211ENST00000481999 VSIRQ9H7M9 311 aa11.93□□□□□ -0.5
CHD3-211ENST00000481999 ZNF665Q9H7R5 613 aa11.93□□□□□ -0.5
CHD3-211ENST00000481999 TNFSF4P23510 183 aa11.92□□□□□ -0.5
CHD3-211ENST00000481999 SLC38A11Q08AI6 406 aa11.92□□□□□ -0.5
CHD3-211ENST00000481999 PNRC1Q12796 327 aaPredicted RBP11.92□□□□□ -0.5
CHD3-211ENST00000481999 C17orf58Q2M2W7 97 aa11.92□□□□□ -0.5
CHD3-211ENST00000481999 MORN2Q502X0 79 aa11.92□□□□□ -0.5
CHD3-211ENST00000481999 NCMAPQ5T1S8 102 aa11.92□□□□□ -0.5
CHD3-211ENST00000481999 TMEM14EPQ6UXP3 125 aa11.92□□□□□ -0.5
CHD3-211ENST00000481999 SLC16A13Q7RTY0 426 aa11.92□□□□□ -0.5
CHD3-211ENST00000481999 VKORC1L1Q8N0U8 176 aa11.92□□□□□ -0.5
CHD3-211ENST00000481999 Q8WTZ3 238 aa11.92□□□□□ -0.5
CHD3-211ENST00000481999 FAM222BQ8WU58 562 aa11.92□□□□□ -0.5
CHD3-211ENST00000481999 P2RX4Q99571 388 aa11.92□□□□□ -0.5
CHD3-211ENST00000481999 HSPB7Q9UBY9 170 aa11.92□□□□□ -0.5
CHD3-211ENST00000481999 CLDN1O95832 211 aa11.92□□□□□ -0.5
CHD3-211ENST00000481999 CASP6P55212 293 aa11.92□□□□□ -0.5
CHD3-211ENST00000481999 CATR1Q13166 79 aa11.92□□□□□ -0.5
CHD3-211ENST00000481999 KIAA0141Q14154 515 aaPredicted RBP11.92□□□□□ -0.5
CHD3-211ENST00000481999 FAM90A2PQ658T7 463 aa11.92□□□□□ -0.5
CHD3-211ENST00000481999 NCR3LG1Q68D85 454 aa11.92□□□□□ -0.5
CHD3-211ENST00000481999 LYPD2Q6UXB3 125 aa11.92□□□□□ -0.5
CHD3-211ENST00000481999 TAF15Q92804 592 aaKnown RBP eCLIP11.92□□□□□ -0.5
CHD3-211ENST00000481999 RNASE6Q93091 150 aaKnown RBP11.92□□□□□ -0.5
CHD3-211ENST00000481999 TOLLIPQ9H0E2 274 aa11.92□□□□□ -0.5
CHD3-211ENST00000481999 RBKSQ9H477 322 aa11.92□□□□□ -0.5
CHD3-211ENST00000481999 CALYQ9NYX4 217 aa11.92□□□□□ -0.5
CHD3-211ENST00000481999 TIMM9Q9Y5J7 89 aa11.92□□□□□ -0.5
CHD3-211ENST00000481999 LY6HO94772 140 aa11.91□□□□□ -0.5
CHD3-211ENST00000481999 IFNA1P01562 189 aa11.91□□□□□ -0.5
CHD3-211ENST00000481999 GNG10P50151 68 aa11.91□□□□□ -0.5
CHD3-211ENST00000481999 RPS16P62249 146 aaKnown RBP11.91□□□□□ -0.5
CHD3-211ENST00000481999 ST6GALNAC3Q8NDV1 305 aa11.91□□□□□ -0.5
CHD3-211ENST00000481999 NDUFB7P17568 137 aa11.91□□□□□ -0.5
CHD3-211ENST00000481999 HNF4GQ14541 408 aa11.91□□□□□ -0.5
CHD3-211ENST00000481999 ZNF343Q6P1L6 599 aa11.91□□□□□ -0.5
CHD3-211ENST00000481999 SSX9Q7RTT3 188 aa11.91□□□□□ -0.5
CHD3-211ENST00000481999 DYNLRB1Q9NP97 96 aa11.91□□□□□ -0.5
CHD3-211ENST00000481999 VAX2Q9UIW0 290 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms