RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 AUP1Q9Y679 476 aa16.08■□□□□ 0.16
CCM2-214ENST00000481194 CTXND1A0A1B0GTU2 59 aa16.08■□□□□ 0.16
CCM2-214ENST00000481194 H7BYZ3 331 aa16.08■□□□□ 0.16
CCM2-214ENST00000481194 PPP1R2P9O14990 202 aa16.08■□□□□ 0.16
CCM2-214ENST00000481194 TGOLN2O43493 480 aa16.08■□□□□ 0.16
CCM2-214ENST00000481194 CD300CQ08708 224 aa16.08■□□□□ 0.16
CCM2-214ENST00000481194 BTN1A1Q13410 526 aa16.08■□□□□ 0.16
CCM2-214ENST00000481194 RPUSD4Q96CM3 377 aaKnown RBP16.08■□□□□ 0.16
CCM2-214ENST00000481194 K7EM74 188 aa16.07■□□□□ 0.16
CCM2-214ENST00000481194 NDUFS8O00217 210 aa16.07■□□□□ 0.16
CCM2-214ENST00000481194 TLNRD1Q9H1K6 362 aa16.07■□□□□ 0.16
CCM2-214ENST00000481194 SLC25A22Q9H936 323 aa16.07■□□□□ 0.16
CCM2-214ENST00000481194 NPIPB11E5RHQ5 1161 aa16.07■□□□□ 0.16
CCM2-214ENST00000481194 KRTAP27-1Q3LI81 207 aa16.07■□□□□ 0.16
CCM2-214ENST00000481194 GAFA1Q96PS6 74 aa16.07■□□□□ 0.16
CCM2-214ENST00000481194 ORM2P19652 201 aa16.07■□□□□ 0.16
CCM2-214ENST00000481194 WDFY1Q8IWB7 410 aa16.07■□□□□ 0.16
CCM2-214ENST00000481194 UBE2G2P60604 165 aa16.06■□□□□ 0.16
CCM2-214ENST00000481194 ZCCHC24Q8N2G6 241 aaKnown RBP16.06■□□□□ 0.16
CCM2-214ENST00000481194 TNFRSF19Q9NS68 423 aa16.06■□□□□ 0.16
CCM2-214ENST00000481194 HIF1ANQ9NWT6 349 aa16.06■□□□□ 0.16
CCM2-214ENST00000481194 RPUSD1Q9UJJ7 312 aaKnown RBP16.06■□□□□ 0.16
CCM2-214ENST00000481194 CXCL2P19875 107 aa16.06■□□□□ 0.16
CCM2-214ENST00000481194 ATP6V0CP27449 155 aa16.06■□□□□ 0.16
CCM2-214ENST00000481194 DLK1P80370 383 aa16.06■□□□□ 0.16
CCM2-214ENST00000481194 HEPN1Q6WQI6 88 aa16.06■□□□□ 0.16
CCM2-214ENST00000481194 LHFPL1Q86WI0 220 aa16.06■□□□□ 0.16
CCM2-214ENST00000481194 IGLV3-9A0A075B6K5 115 aa16.06■□□□□ 0.16
CCM2-214ENST00000481194 CXorf1O96002 111 aa16.06■□□□□ 0.16
CCM2-214ENST00000481194 ZP3P21754 424 aa16.06■□□□□ 0.16
CCM2-214ENST00000481194 OR4X1Q8NH49 305 aa16.06■□□□□ 0.16
CCM2-214ENST00000481194 C18orf12Q96KH6 178 aa16.06■□□□□ 0.16
CCM2-214ENST00000481194 GINS3Q9BRX5 216 aa16.06■□□□□ 0.16
CCM2-214ENST00000481194 M0R1W7 72 aa16.06■□□□□ 0.16
CCM2-214ENST00000481194 SPP1P10451 314 aa16.06■□□□□ 0.16
CCM2-214ENST00000481194 GGACTQ9BVM4 153 aa16.06■□□□□ 0.16
CCM2-214ENST00000481194 SAMD10Q9BYL1 202 aa16.06■□□□□ 0.16
CCM2-214ENST00000481194 SAA2-SAA4A0A096LPE2 208 aa16.05■□□□□ 0.16
CCM2-214ENST00000481194 A6NNC1 897 aa16.05■□□□□ 0.16
CCM2-214ENST00000481194 MOSP00540 346 aa16.05■□□□□ 0.16
CCM2-214ENST00000481194 SAA2P0DJI9 122 aaPredicted RBP16.05■□□□□ 0.16
CCM2-214ENST00000481194 EGR1P18146 543 aa16.05■□□□□ 0.16
CCM2-214ENST00000481194 SIGIRRQ6IA17 410 aa16.05■□□□□ 0.16
CCM2-214ENST00000481194 TOLLIPQ9H0E2 274 aa16.05■□□□□ 0.16
CCM2-214ENST00000481194 UBE2L3P68036 154 aaKnown RBP16.05■□□□□ 0.16
CCM2-214ENST00000481194 MRPL20Q9BYC9 149 aaKnown RBP16.05■□□□□ 0.16
CCM2-214ENST00000481194 SLC35B3Q9H1N7 401 aa16.05■□□□□ 0.16
CCM2-214ENST00000481194 OOSP1A8MZH6 123 aa16.05■□□□□ 0.16
CCM2-214ENST00000481194 CCL3L1P16619 93 aa16.05■□□□□ 0.16
CCM2-214ENST00000481194 UNQ5815/PRO19632Q6UWF5 114 aa16.05■□□□□ 0.16
CCM2-214ENST00000481194 CLEC9AQ6UXN8 241 aa16.05■□□□□ 0.16
CCM2-214ENST00000481194 SFTA3P0C7M3 94 aa16.05■□□□□ 0.16
CCM2-214ENST00000481194 NHLH2Q02577 135 aa16.05■□□□□ 0.16
CCM2-214ENST00000481194 ZFP82Q8N141 532 aa16.05■□□□□ 0.16
CCM2-214ENST00000481194 ALPK2Q86TB3 2170 aa16.05■□□□□ 0.16
CCM2-214ENST00000481194 ZNF503-AS2A6NEH8 195 aa16.04■□□□□ 0.16
CCM2-214ENST00000481194 C17orf98A8MV24 154 aa16.04■□□□□ 0.16
CCM2-214ENST00000481194 ZNF430Q9H8G1 570 aaPredicted RBP16.04■□□□□ 0.16
CCM2-214ENST00000481194 SLC25A16P16260 332 aa16.04■□□□□ 0.16
CCM2-214ENST00000481194 RSPO1Q2MKA7 263 aaPredicted RBP16.04■□□□□ 0.16
CCM2-214ENST00000481194 TDGF1P3P51864 188 aa16.04■□□□□ 0.16
CCM2-214ENST00000481194 C20orf24Q9BUV8 137 aa16.04■□□□□ 0.16
CCM2-214ENST00000481194 PATZ1Q9HBE1 687 aaKnown RBP16.04■□□□□ 0.16
CCM2-214ENST00000481194 LRTM2Q8N967 370 aa16.04■□□□□ 0.16
CCM2-214ENST00000481194 HIGD1AQ9Y241 93 aa16.04■□□□□ 0.16
CCM2-214ENST00000481194 SLC25A5P05141 298 aaKnown RBP16.04■□□□□ 0.16
CCM2-214ENST00000481194 WDR25Q64LD2 544 aaPredicted RBP16.04■□□□□ 0.16
CCM2-214ENST00000481194 C7orf69Q9H7B7 122 aa16.04■□□□□ 0.16
CCM2-214ENST00000481194 OR4A47Q6IF82 309 aa16.03■□□□□ 0.16
CCM2-214ENST00000481194 ZNF788Q6ZQV5 615 aa16.03■□□□□ 0.16
CCM2-214ENST00000481194 SMDT1Q9H4I9 107 aa16.03■□□□□ 0.16
CCM2-214ENST00000481194 DOK5Q9P104 306 aa16.03■□□□□ 0.16
CCM2-214ENST00000481194 RBFOX3A6NFN3 312 aa16.03■□□□□ 0.16
CCM2-214ENST00000481194 KCNAB3O43448 404 aa16.03■□□□□ 0.16
CCM2-214ENST00000481194 MFAP4P55083 255 aa16.03■□□□□ 0.16
CCM2-214ENST00000481194 HLA-DRB5Q30154 266 aa16.03■□□□□ 0.16
CCM2-214ENST00000481194 FAM78BQ5VT40 261 aa16.03■□□□□ 0.16
CCM2-214ENST00000481194 PSPNO60542 156 aa16.03■□□□□ 0.16
CCM2-214ENST00000481194 LMO1P25800 156 aa16.03■□□□□ 0.16
CCM2-214ENST00000481194 SULT1A2P50226 295 aa16.03■□□□□ 0.16
CCM2-214ENST00000481194 FXYD3Q14802 87 aa16.03■□□□□ 0.16
CCM2-214ENST00000481194 SSMEM1Q8WWF3 244 aa16.03■□□□□ 0.16
CCM2-214ENST00000481194 C19orf24Q9BVV8 132 aa16.03■□□□□ 0.16
CCM2-214ENST00000481194 IGKV1D-13A0A0B4J2D9 117 aa16.03■□□□□ 0.16
CCM2-214ENST00000481194 TSTD3H0UI37 97 aa16.03■□□□□ 0.16
CCM2-214ENST00000481194 IGKV1-13P0DP09 117 aa16.03■□□□□ 0.16
CCM2-214ENST00000481194 DMRTA2Q96SC8 542 aa16.03■□□□□ 0.16
CCM2-214ENST00000481194 GPHA2Q96T91 129 aa16.03■□□□□ 0.16
CCM2-214ENST00000481194 RAB4AP20338 218 aa16.02■□□□□ 0.16
CCM2-214ENST00000481194 CFHR2P36980 270 aa16.02■□□□□ 0.16
CCM2-214ENST00000481194 FAM71F2Q6NXP2 309 aa16.02■□□□□ 0.16
CCM2-214ENST00000481194 ACACAQ13085 2346 aa16.02■□□□□ 0.16
CCM2-214ENST00000481194 IGKV1D-17A0A075B6S4 117 aa16.02■□□□□ 0.16
CCM2-214ENST00000481194 LYNX1G3V0Z9 82 aa16.02■□□□□ 0.16
CCM2-214ENST00000481194 M0QZK8 103 aa16.02■□□□□ 0.16
CCM2-214ENST00000481194 HYPMO75409 117 aa16.02■□□□□ 0.16
CCM2-214ENST00000481194 LYNX1P0DP58 116 aa16.02■□□□□ 0.16
CCM2-214ENST00000481194 F8VVB4 439 aa16.02■□□□□ 0.15
CCM2-214ENST00000481194 F8VWA3 439 aa16.02■□□□□ 0.15
CCM2-214ENST00000481194 Q6ZSR3 168 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms