RNA–Protein interactions for RNA: ENST00000480539.1

ABCF3-213, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-213ENST00000480539 CX3CL1P78423 397 aa11.92□□□□□ -0.5
ABCF3-213ENST00000480539 ECSCRQ19T08 205 aa11.92□□□□□ -0.5
ABCF3-213ENST00000480539 LPCAT3Q6P1A2 487 aa11.92□□□□□ -0.5
ABCF3-213ENST00000480539 SSX9Q7RTT3 188 aa11.92□□□□□ -0.5
ABCF3-213ENST00000480539 TBC1D26Q86UD7 250 aa11.92□□□□□ -0.5
ABCF3-213ENST00000480539 TOMM5Q8N4H5 51 aa11.92□□□□□ -0.5
ABCF3-213ENST00000480539 OR51S1Q8NGJ8 323 aa11.92□□□□□ -0.5
ABCF3-213ENST00000480539 OR13C8Q8NGS7 320 aa11.92□□□□□ -0.5
ABCF3-213ENST00000480539 TERB2Q8NHR7 220 aa11.92□□□□□ -0.5
ABCF3-213ENST00000480539 MARCH1Q8TCQ1 289 aa11.92□□□□□ -0.5
ABCF3-213ENST00000480539 SLC2A9Q9NRM0 540 aa11.92□□□□□ -0.5
ABCF3-213ENST00000480539 PTTG2Q9NZH5 202 aa11.92□□□□□ -0.5
ABCF3-213ENST00000480539 VDAC1P21796 283 aa11.91□□□□□ -0.5
ABCF3-213ENST00000480539 S100GP29377 79 aa11.91□□□□□ -0.5
ABCF3-213ENST00000480539 AP3S2P59780 193 aa11.91□□□□□ -0.5
ABCF3-213ENST00000480539 KHDC1LQ5JSQ8 128 aa11.91□□□□□ -0.5
ABCF3-213ENST00000480539 TRIQKQ629K1 86 aa11.91□□□□□ -0.5
ABCF3-213ENST00000480539 ZNF57Q68EA5 555 aaPredicted RBP11.91□□□□□ -0.5
ABCF3-213ENST00000480539 PPP1R27Q86WC6 154 aa11.91□□□□□ -0.5
ABCF3-213ENST00000480539 POC5Q8NA72 575 aa11.91□□□□□ -0.5
ABCF3-213ENST00000480539 OR4X2Q8NGF9 303 aa11.91□□□□□ -0.5
ABCF3-213ENST00000480539 GRPEL2Q8TAA5 225 aa11.91□□□□□ -0.5
ABCF3-213ENST00000480539 SDHCQ99643 169 aaPredicted RBP11.91□□□□□ -0.5
ABCF3-213ENST00000480539 CITED2Q99967 270 aaPredicted RBP11.91□□□□□ -0.5
ABCF3-213ENST00000480539 FAM103A1Q9BTL3 118 aaKnown RBP11.91□□□□□ -0.5
ABCF3-213ENST00000480539 WSB1Q9Y6I7 421 aa11.91□□□□□ -0.5
ABCF3-213ENST00000480539 A0A1W2PRX2 142 aa11.9□□□□□ -0.5
ABCF3-213ENST00000480539 G3V318 75 aa11.9□□□□□ -0.5
ABCF3-213ENST00000480539 ARPC1BO15143 372 aaKnown RBP11.9□□□□□ -0.5
ABCF3-213ENST00000480539 RBFOX2O43251 390 aaKnown RBP eCLIP11.9□□□□□ -0.5
ABCF3-213ENST00000480539 IGF1P05019 195 aa11.9□□□□□ -0.5
ABCF3-213ENST00000480539 PIGPP57054 158 aa11.9□□□□□ -0.5
ABCF3-213ENST00000480539 SLC35B1P78383 322 aa11.9□□□□□ -0.5
ABCF3-213ENST00000480539 SSBP2P81877 361 aaPredicted RBP11.9□□□□□ -0.5
ABCF3-213ENST00000480539 TNXAQ16473 311 aa11.9□□□□□ -0.5
ABCF3-213ENST00000480539 BAK1Q16611 211 aa11.9□□□□□ -0.5
ABCF3-213ENST00000480539 TCTEX1D4Q5JR98 221 aa11.9□□□□□ -0.5
ABCF3-213ENST00000480539 GDPD1Q8N9F7 314 aa11.9□□□□□ -0.5
ABCF3-213ENST00000480539 ARPC1AQ92747 370 aa11.9□□□□□ -0.5
ABCF3-213ENST00000480539 PRRT1Q99946 306 aa11.9□□□□□ -0.5
ABCF3-213ENST00000480539 HRASLSQ9HDD0 168 aa11.9□□□□□ -0.5
ABCF3-213ENST00000480539 AKIP1Q9NQ31 210 aa11.9□□□□□ -0.5
ABCF3-213ENST00000480539 SLC2A8Q9NY64 477 aa11.9□□□□□ -0.5
ABCF3-213ENST00000480539 TRAV41A0A0B4J266 112 aa11.89□□□□□ -0.51
ABCF3-213ENST00000480539 RPA2P15927 270 aa11.89□□□□□ -0.51
ABCF3-213ENST00000480539 F2RP25116 425 aa11.89□□□□□ -0.51
ABCF3-213ENST00000480539 FAUP35544 74 aaKnown RBP11.89□□□□□ -0.51
ABCF3-213ENST00000480539 INPP1P49441 399 aa11.89□□□□□ -0.51
ABCF3-213ENST00000480539 RND3P61587 244 aa11.89□□□□□ -0.51
ABCF3-213ENST00000480539 CFHR3Q02985 330 aa11.89□□□□□ -0.51
ABCF3-213ENST00000480539 FXYD3Q14802 87 aa11.89□□□□□ -0.51
ABCF3-213ENST00000480539 PRSS8Q16651 343 aa11.89□□□□□ -0.51
ABCF3-213ENST00000480539 MRGPRG-AS1Q2M3A8 158 aa11.89□□□□□ -0.51
ABCF3-213ENST00000480539 NSUN5P1Q3KNT7 163 aa11.89□□□□□ -0.51
ABCF3-213ENST00000480539 LCNL1Q6ZST4 164 aa11.89□□□□□ -0.51
ABCF3-213ENST00000480539 TEX45Q8NA69 505 aa11.89□□□□□ -0.51
ABCF3-213ENST00000480539 ZFAND1Q8TCF1 268 aa11.89□□□□□ -0.51
ABCF3-213ENST00000480539 ZNF486Q96H40 463 aaPredicted RBP11.89□□□□□ -0.51
ABCF3-213ENST00000480539 RHOVQ96L33 236 aa11.89□□□□□ -0.51
ABCF3-213ENST00000480539 ZNF430Q9H8G1 570 aaPredicted RBP11.89□□□□□ -0.51
ABCF3-213ENST00000480539 COMMD9Q9P000 198 aa11.89□□□□□ -0.51
ABCF3-213ENST00000480539 TET2Q6N021 2002 aaPredicted RBP11.88□□□□□ -0.51
ABCF3-213ENST00000480539 KBTBD11O94819 623 aa11.88□□□□□ -0.51
ABCF3-213ENST00000480539 CNIH1O95406 144 aa11.88□□□□□ -0.51
ABCF3-213ENST00000480539 HPRT1P00492 218 aa11.88□□□□□ -0.51
ABCF3-213ENST00000480539 HRASP01112 189 aa11.88□□□□□ -0.51
ABCF3-213ENST00000480539 CTSDP07339 412 aaPredicted RBP11.88□□□□□ -0.51
ABCF3-213ENST00000480539 EGR2P11161 476 aaPredicted RBP11.88□□□□□ -0.51
ABCF3-213ENST00000480539 ECI1P42126 302 aa11.88□□□□□ -0.51
ABCF3-213ENST00000480539 LPAR6P43657 344 aa11.88□□□□□ -0.51
ABCF3-213ENST00000480539 TAS2R31P59538 309 aa11.88□□□□□ -0.51
ABCF3-213ENST00000480539 ZNF45Q02386 682 aa11.88□□□□□ -0.51
ABCF3-213ENST00000480539 C10orf55Q5SWW7 151 aa11.88□□□□□ -0.51
ABCF3-213ENST00000480539 OR4A47Q6IF82 309 aa11.88□□□□□ -0.51
ABCF3-213ENST00000480539 ZNF562Q6V9R5 426 aa11.88□□□□□ -0.51
ABCF3-213ENST00000480539 PUSL1Q8N0Z8 303 aaKnown RBP11.88□□□□□ -0.51
ABCF3-213ENST00000480539 CD300LFQ8TDQ1 290 aa11.88□□□□□ -0.51
ABCF3-213ENST00000480539 R3HDM4Q96D70 268 aa11.88□□□□□ -0.51
ABCF3-213ENST00000480539 COPZ2Q9P299 210 aa11.88□□□□□ -0.51
ABCF3-213ENST00000480539 SCP2D1Q9UJQ7 156 aa11.88□□□□□ -0.51
ABCF3-213ENST00000480539 C14orf166Q9Y224 244 aaKnown RBP11.88□□□□□ -0.51
ABCF3-213ENST00000480539 LINC00854A0A1B0GVQ3 168 aa11.87□□□□□ -0.51
ABCF3-213ENST00000480539 TCRBV4S1A1TA0A5B7 111 aa11.87□□□□□ -0.51
ABCF3-213ENST00000480539 M0QZ24 198 aa11.87□□□□□ -0.51
ABCF3-213ENST00000480539 MPPED1O15442 326 aa11.87□□□□□ -0.51
ABCF3-213ENST00000480539 OR2A4O95047 310 aa11.87□□□□□ -0.51
ABCF3-213ENST00000480539 TSPAN15O95858 294 aa11.87□□□□□ -0.51
ABCF3-213ENST00000480539 IL7P13232 177 aa11.87□□□□□ -0.51
ABCF3-213ENST00000480539 NQO2P16083 231 aa11.87□□□□□ -0.51
ABCF3-213ENST00000480539 CRIP2P52943 208 aaPredicted RBP11.87□□□□□ -0.51
ABCF3-213ENST00000480539 SURF2Q15527 256 aaPredicted RBP11.87□□□□□ -0.51
ABCF3-213ENST00000480539 C2orf68Q2NKX9 166 aa11.87□□□□□ -0.51
ABCF3-213ENST00000480539 ZNF585BQ52M93 769 aa11.87□□□□□ -0.51
ABCF3-213ENST00000480539 C19orf54Q5BKX5 351 aa11.87□□□□□ -0.51
ABCF3-213ENST00000480539 CCDC71LQ8N9Z2 235 aa11.87□□□□□ -0.51
ABCF3-213ENST00000480539 DMBX1Q8NFW5 382 aa11.87□□□□□ -0.51
ABCF3-213ENST00000480539 SGMS2Q8NHU3 365 aa11.87□□□□□ -0.51
ABCF3-213ENST00000480539 VSTM2AQ8TAG5 236 aa11.87□□□□□ -0.51
ABCF3-213ENST00000480539 OR2A7Q96R45 310 aa11.87□□□□□ -0.51
ABCF3-213ENST00000480539 GON7Q9BXV9 100 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms