RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 MXD1Q05195 221 aa5.44□□□□□ -1.54
COL17A1-205ENST00000480127 KIAA0141Q14154 515 aaPredicted RBP5.44□□□□□ -1.54
COL17A1-205ENST00000480127 SSX9Q7RTT3 188 aa5.44□□□□□ -1.54
COL17A1-205ENST00000480127 FAM223AQ8IWN6 122 aa5.44□□□□□ -1.54
COL17A1-205ENST00000480127 MMD2Q8IY49 270 aa5.44□□□□□ -1.54
COL17A1-205ENST00000480127 Q8N402 240 aa5.44□□□□□ -1.54
COL17A1-205ENST00000480127 ZNF645Q8N7E2 425 aa5.44□□□□□ -1.54
COL17A1-205ENST00000480127 TEX45Q8NA69 505 aa5.44□□□□□ -1.54
COL17A1-205ENST00000480127 VSTM2AQ8TAG5 236 aa5.44□□□□□ -1.54
COL17A1-205ENST00000480127 NUDCD2Q8WVJ2 157 aa5.44□□□□□ -1.54
COL17A1-205ENST00000480127 SRSF12Q8WXF0 261 aaKnown RBP5.44□□□□□ -1.54
COL17A1-205ENST00000480127 FCGR1BQ92637 280 aa5.44□□□□□ -1.54
COL17A1-205ENST00000480127 RHOVQ96L33 236 aa5.44□□□□□ -1.54
COL17A1-205ENST00000480127 GFI1Q99684 422 aa5.44□□□□□ -1.54
COL17A1-205ENST00000480127 AIFM2Q9BRQ8 373 aa5.44□□□□□ -1.54
COL17A1-205ENST00000480127 CABLES2Q9BTV7 478 aa5.44□□□□□ -1.54
COL17A1-205ENST00000480127 TINAGL1Q9GZM7 467 aaPredicted RBP5.44□□□□□ -1.54
COL17A1-205ENST00000480127 VCX3AQ9NNX9 186 aa5.44□□□□□ -1.54
COL17A1-205ENST00000480127 IFT46Q9NQC8 304 aa5.44□□□□□ -1.54
COL17A1-205ENST00000480127 NDUFB11Q9NX14 153 aa5.44□□□□□ -1.54
COL17A1-205ENST00000480127 TAS2R8Q9NYW2 309 aa5.44□□□□□ -1.54
COL17A1-205ENST00000480127 RRP15Q9Y3B9 282 aaKnown RBP5.44□□□□□ -1.54
COL17A1-205ENST00000480127 TNCP24821 2201 aa5.44□□□□□ -1.54
COL17A1-205ENST00000480127 STARD9Q9P2P6 4700 aa5.44□□□□□ -1.54
COL17A1-205ENST00000480127 HYDINQ4G0P3 5121 aa5.43□□□□□ -1.54
COL17A1-205ENST00000480127 TRBV6-7A0A0A0MS04 114 aa5.43□□□□□ -1.54
COL17A1-205ENST00000480127 TRDV1A0A1B0GX56 115 aa5.43□□□□□ -1.54
COL17A1-205ENST00000480127 AIREO43918 545 aa5.43□□□□□ -1.54
COL17A1-205ENST00000480127 OR2A4O95047 310 aa5.43□□□□□ -1.54
COL17A1-205ENST00000480127 HRASP01112 189 aa5.43□□□□□ -1.54
COL17A1-205ENST00000480127 PRH1P02810 166 aa5.43□□□□□ -1.54
COL17A1-205ENST00000480127 FCER2P06734 321 aa5.43□□□□□ -1.54
COL17A1-205ENST00000480127 SAA1P0DJI8 122 aaPredicted RBP5.43□□□□□ -1.54
COL17A1-205ENST00000480127 SNRPBP14678 240 aaKnown RBP5.43□□□□□ -1.54
COL17A1-205ENST00000480127 DTYMKP23919 212 aa5.43□□□□□ -1.54
COL17A1-205ENST00000480127 S100GP29377 79 aa5.43□□□□□ -1.54
COL17A1-205ENST00000480127 DUTP33316 252 aaKnown RBP5.43□□□□□ -1.54
COL17A1-205ENST00000480127 RPL27AP46776 148 aaKnown RBP5.43□□□□□ -1.54
COL17A1-205ENST00000480127 FXYD4P59646 89 aa5.43□□□□□ -1.54
COL17A1-205ENST00000480127 HERV-K104P61576 105 aa5.43□□□□□ -1.54
COL17A1-205ENST00000480127 ERVK-16P61578 105 aa5.43□□□□□ -1.54
COL17A1-205ENST00000480127 PLA2G7Q13093 441 aa5.43□□□□□ -1.54
COL17A1-205ENST00000480127 CATR1Q13166 79 aa5.43□□□□□ -1.54
COL17A1-205ENST00000480127 CDK10Q15131 360 aa5.43□□□□□ -1.54
COL17A1-205ENST00000480127 PRSS8Q16651 343 aa5.43□□□□□ -1.54
COL17A1-205ENST00000480127 C15orf32Q32M92 178 aa5.43□□□□□ -1.54
COL17A1-205ENST00000480127 TMEM177Q53S58 311 aa5.43□□□□□ -1.54
COL17A1-205ENST00000480127 FAM209BQ5JX69 171 aa5.43□□□□□ -1.54
COL17A1-205ENST00000480127 IDNKQ5T6J7 187 aa5.43□□□□□ -1.54
COL17A1-205ENST00000480127 HACD4Q5VWC8 232 aa5.43□□□□□ -1.54
COL17A1-205ENST00000480127 NECAP1Q8NC96 275 aa5.43□□□□□ -1.54
COL17A1-205ENST00000480127 DMBX1Q8NFW5 382 aa5.43□□□□□ -1.54
COL17A1-205ENST00000480127 SECTM1Q8WVN6 248 aa5.43□□□□□ -1.54
COL17A1-205ENST00000480127 NRG4Q8WWG1 115 aa5.43□□□□□ -1.54
COL17A1-205ENST00000480127 HSD17B10Q99714 261 aaKnown RBP5.43□□□□□ -1.54
COL17A1-205ENST00000480127 SPATA25Q9BR10 227 aa5.43□□□□□ -1.54
COL17A1-205ENST00000480127 HINT2Q9BX68 163 aa5.43□□□□□ -1.54
COL17A1-205ENST00000480127 ZNF430Q9H8G1 570 aaPredicted RBP5.43□□□□□ -1.54
COL17A1-205ENST00000480127 DIABLOQ9NR28 239 aa5.43□□□□□ -1.54
COL17A1-205ENST00000480127 RAB26Q9ULW5 256 aa5.43□□□□□ -1.54
COL17A1-205ENST00000480127 OR2W1Q9Y3N9 320 aa5.43□□□□□ -1.54
COL17A1-205ENST00000480127 TRAV18A0A075B6X5 111 aa5.42□□□□□ -1.54
COL17A1-205ENST00000480127 MFNGO00587 321 aa5.42□□□□□ -1.54
COL17A1-205ENST00000480127 TNFSF12O43508 249 aa5.42□□□□□ -1.54
COL17A1-205ENST00000480127 OR2J3O76001 311 aa5.42□□□□□ -1.54
COL17A1-205ENST00000480127 IGHV3-23P01764 117 aa5.42□□□□□ -1.54
COL17A1-205ENST00000480127 KIR2DS2P43631 304 aa5.42□□□□□ -1.54
COL17A1-205ENST00000480127 MECP2P51608 486 aaKnown RBP5.42□□□□□ -1.54
COL17A1-205ENST00000480127 GABARAPL2P60520 117 aa5.42□□□□□ -1.54
COL17A1-205ENST00000480127 SSX1Q16384 188 aa5.42□□□□□ -1.54
COL17A1-205ENST00000480127 FAM106AQ4KMX7 169 aa5.42□□□□□ -1.54
COL17A1-205ENST00000480127 CNIH2Q6PI25 160 aa5.42□□□□□ -1.54
COL17A1-205ENST00000480127 SLC16A13Q7RTY0 426 aa5.42□□□□□ -1.54
COL17A1-205ENST00000480127 TPRA1Q86W33 373 aa5.42□□□□□ -1.54
COL17A1-205ENST00000480127 TMEM17Q86X19 198 aa5.42□□□□□ -1.54
COL17A1-205ENST00000480127 H1FOOQ8IZA3 346 aaPredicted RBP5.42□□□□□ -1.54
COL17A1-205ENST00000480127 VKORC1L1Q8N0U8 176 aa5.42□□□□□ -1.54
COL17A1-205ENST00000480127 LGALS14Q8TCE9 139 aa5.42□□□□□ -1.54
COL17A1-205ENST00000480127 OR2A7Q96R45 310 aa5.42□□□□□ -1.54
COL17A1-205ENST00000480127 COMMD5Q9GZQ3 224 aa5.42□□□□□ -1.54
COL17A1-205ENST00000480127 DCSTAMPQ9H295 470 aa5.42□□□□□ -1.54
COL17A1-205ENST00000480127 PLEKHA3Q9HB20 300 aa5.42□□□□□ -1.54
COL17A1-205ENST00000480127 AKIP1Q9NQ31 210 aa5.42□□□□□ -1.54
COL17A1-205ENST00000480127 C19orf73Q9NVV2 129 aa5.42□□□□□ -1.54
COL17A1-205ENST00000480127 RHBDL2Q9NX52 303 aa5.42□□□□□ -1.54
COL17A1-205ENST00000480127 ANXA10Q9UJ72 324 aa5.42□□□□□ -1.54
COL17A1-205ENST00000480127 FBXL7Q9UJT9 491 aa5.42□□□□□ -1.54
COL17A1-205ENST00000480127 RBMX2Q9Y388 322 aaKnown RBP5.42□□□□□ -1.54
COL17A1-205ENST00000480127 SHISA3A0PJX4 238 aa5.41□□□□□ -1.54
COL17A1-205ENST00000480127 HMX3A6NHT5 357 aa5.41□□□□□ -1.54
COL17A1-205ENST00000480127 SRRM4A7MD48 611 aaKnown RBP5.41□□□□□ -1.54
COL17A1-205ENST00000480127 LINC00473A8K010 186 aa5.41□□□□□ -1.54
COL17A1-205ENST00000480127 FOXI3A8MTJ6 420 aaPredicted RBP5.41□□□□□ -1.54
COL17A1-205ENST00000480127 PPP5D1E7EU14 171 aa5.41□□□□□ -1.54
COL17A1-205ENST00000480127 MRPS14O60783 128 aaKnown RBP5.41□□□□□ -1.54
COL17A1-205ENST00000480127 GGCTO75223 188 aaKnown RBP5.41□□□□□ -1.54
COL17A1-205ENST00000480127 JTBO76095 146 aa5.41□□□□□ -1.54
COL17A1-205ENST00000480127 IGLV1-51P01701 117 aa5.41□□□□□ -1.54
COL17A1-205ENST00000480127 IGLV2-23P01705 113 aa5.41□□□□□ -1.54
COL17A1-205ENST00000480127 HIST1H1BP16401 226 aaKnown RBP5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms