RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 Q8N1Y9 231 aa13.27□□□□□ -0.29
ECHDC1-216ENST00000479525 ZNF645Q8N7E2 425 aa13.27□□□□□ -0.29
ECHDC1-216ENST00000479525 ADAD2Q8NCV1 583 aaKnown RBP13.27□□□□□ -0.29
ECHDC1-216ENST00000479525 PEF1Q9UBV8 284 aaKnown RBP13.27□□□□□ -0.29
ECHDC1-216ENST00000479525 SSR3Q9UNL2 185 aa13.27□□□□□ -0.29
ECHDC1-216ENST00000479525 RBMX2Q9Y388 322 aaKnown RBP13.27□□□□□ -0.29
ECHDC1-216ENST00000479525 OR2W1Q9Y3N9 320 aa13.27□□□□□ -0.29
ECHDC1-216ENST00000479525 STAB2Q8WWQ8 2551 aa13.26□□□□□ -0.29
ECHDC1-216ENST00000479525 H3BUA1 57 aa13.26□□□□□ -0.29
ECHDC1-216ENST00000479525 IGHV3-23P01764 117 aa13.26□□□□□ -0.29
ECHDC1-216ENST00000479525 OR9G9P0C7N8 305 aa13.26□□□□□ -0.29
ECHDC1-216ENST00000479525 IGHV4-30-4P0DP06 118 aa13.26□□□□□ -0.29
ECHDC1-216ENST00000479525 RRASP10301 218 aa13.26□□□□□ -0.29
ECHDC1-216ENST00000479525 FGF9P31371 208 aaPredicted RBP13.26□□□□□ -0.29
ECHDC1-216ENST00000479525 RANBP1P43487 201 aa13.26□□□□□ -0.29
ECHDC1-216ENST00000479525 RHOGP84095 191 aa13.26□□□□□ -0.29
ECHDC1-216ENST00000479525 KLF5Q13887 457 aaPredicted RBP13.26□□□□□ -0.29
ECHDC1-216ENST00000479525 NEDD8Q15843 81 aa13.26□□□□□ -0.29
ECHDC1-216ENST00000479525 IDNKQ5T6J7 187 aa13.26□□□□□ -0.29
ECHDC1-216ENST00000479525 Q6ZS49 121 aa13.26□□□□□ -0.29
ECHDC1-216ENST00000479525 SSX9Q7RTT3 188 aa13.26□□□□□ -0.29
ECHDC1-216ENST00000479525 TEX45Q8NA69 505 aa13.26□□□□□ -0.29
ECHDC1-216ENST00000479525 TCTEX1D2Q8WW35 142 aa13.26□□□□□ -0.29
ECHDC1-216ENST00000479525 SLC25A38Q96DW6 304 aa13.26□□□□□ -0.29
ECHDC1-216ENST00000479525 AKIP1Q9NQ31 210 aa13.26□□□□□ -0.29
ECHDC1-216ENST00000479525 RHBDL2Q9NX52 303 aa13.26□□□□□ -0.29
ECHDC1-216ENST00000479525 TAS2R8Q9NYW2 309 aa13.26□□□□□ -0.29
ECHDC1-216ENST00000479525 A0A0G2JLM5 398 aa13.25□□□□□ -0.29
ECHDC1-216ENST00000479525 E7EUB6 86 aa13.25□□□□□ -0.29
ECHDC1-216ENST00000479525 OR2J3O76001 311 aa13.25□□□□□ -0.29
ECHDC1-216ENST00000479525 HLA-AP01891 365 aaKnown RBP13.25□□□□□ -0.29
ECHDC1-216ENST00000479525 ZP3P21754 424 aa13.25□□□□□ -0.29
ECHDC1-216ENST00000479525 GALP22466 123 aa13.25□□□□□ -0.29
ECHDC1-216ENST00000479525 EXOSC2Q13868 293 aaKnown RBP13.25□□□□□ -0.29
ECHDC1-216ENST00000479525 ZNF343Q6P1L6 599 aa13.25□□□□□ -0.29
ECHDC1-216ENST00000479525 OR9G4Q8NGQ1 327 aa13.25□□□□□ -0.29
ECHDC1-216ENST00000479525 ADTRPQ96IZ2 230 aa13.25□□□□□ -0.29
ECHDC1-216ENST00000479525 CENPOQ9BU64 300 aa13.25□□□□□ -0.29
ECHDC1-216ENST00000479525 TRAV18A0A075B6X5 111 aa13.24□□□□□ -0.29
ECHDC1-216ENST00000479525 PPP5D1E7EU14 171 aa13.24□□□□□ -0.29
ECHDC1-216ENST00000479525 DIRAS3O95661 229 aa13.24□□□□□ -0.29
ECHDC1-216ENST00000479525 HLA-DQB1P01920 261 aa13.24□□□□□ -0.29
ECHDC1-216ENST00000479525 BRWD1-AS2P59051 145 aa13.24□□□□□ -0.29
ECHDC1-216ENST00000479525 CDK10Q15131 360 aa13.24□□□□□ -0.29
ECHDC1-216ENST00000479525 RPEL1Q2QD12 228 aa13.24□□□□□ -0.29
ECHDC1-216ENST00000479525 SECTM1Q8WVN6 248 aa13.24□□□□□ -0.29
ECHDC1-216ENST00000479525 ANXA10Q9UJ72 324 aa13.24□□□□□ -0.29
ECHDC1-216ENST00000479525 A0A1B0GW64 132 aa13.23□□□□□ -0.29
ECHDC1-216ENST00000479525 BMPR1BO00238 502 aa13.23□□□□□ -0.29
ECHDC1-216ENST00000479525 CSN3P07498 182 aa13.23□□□□□ -0.29
ECHDC1-216ENST00000479525 AADACP22760 399 aa13.23□□□□□ -0.29
ECHDC1-216ENST00000479525 CNIH2Q6PI25 160 aa13.23□□□□□ -0.29
ECHDC1-216ENST00000479525 ZNF773Q6PK81 442 aa13.23□□□□□ -0.29
ECHDC1-216ENST00000479525 OSR1Q8TAX0 266 aaPredicted RBP13.23□□□□□ -0.29
ECHDC1-216ENST00000479525 FYTTD1Q96QD9 318 aaKnown RBP13.23□□□□□ -0.29
ECHDC1-216ENST00000479525 CCL28Q9NRJ3 127 aa13.23□□□□□ -0.29
ECHDC1-216ENST00000479525 DYNC2H1Q8NCM8 4307 aaKnown RBP13.23□□□□□ -0.29
ECHDC1-216ENST00000479525 MRPS14O60783 128 aaKnown RBP13.22□□□□□ -0.29
ECHDC1-216ENST00000479525 ACTL6BO94805 426 aa13.22□□□□□ -0.29
ECHDC1-216ENST00000479525 REG1AP05451 166 aa13.22□□□□□ -0.29
ECHDC1-216ENST00000479525 CD36P16671 472 aa13.22□□□□□ -0.29
ECHDC1-216ENST00000479525 EIF4EBP1Q13541 118 aaPredicted RBP13.22□□□□□ -0.29
ECHDC1-216ENST00000479525 ZFAND6Q6FIF0 208 aa13.22□□□□□ -0.29
ECHDC1-216ENST00000479525 TPRA1Q86W33 373 aa13.22□□□□□ -0.29
ECHDC1-216ENST00000479525 FCGR1BQ92637 280 aa13.22□□□□□ -0.29
ECHDC1-216ENST00000479525 STARD9Q9P2P6 4700 aa13.22□□□□□ -0.29
ECHDC1-216ENST00000479525 TEX22C9J3V5 150 aa13.21□□□□□ -0.29
ECHDC1-216ENST00000479525 IL6RP08887 468 aaPredicted RBP13.21□□□□□ -0.29
ECHDC1-216ENST00000479525 RPA2P15927 270 aa13.21□□□□□ -0.29
ECHDC1-216ENST00000479525 FXYD4P59646 89 aa13.21□□□□□ -0.29
ECHDC1-216ENST00000479525 ARPC4P59998 168 aa13.21□□□□□ -0.29
ECHDC1-216ENST00000479525 ADAMTSL5Q6ZMM2 481 aa13.21□□□□□ -0.29
ECHDC1-216ENST00000479525 MFSD4AQ8N468 514 aa13.21□□□□□ -0.29
ECHDC1-216ENST00000479525 BEST4Q8NFU0 473 aa13.21□□□□□ -0.29
ECHDC1-216ENST00000479525 MUC7Q8TAX7 377 aa13.21□□□□□ -0.29
ECHDC1-216ENST00000479525 TMEM68Q96MH6 324 aa13.21□□□□□ -0.29
ECHDC1-216ENST00000479525 DCSTAMPQ9H295 470 aa13.21□□□□□ -0.29
ECHDC1-216ENST00000479525 Q9H521 79 aa13.21□□□□□ -0.29
ECHDC1-216ENST00000479525 RETNQ9HD89 108 aa13.21□□□□□ -0.29
ECHDC1-216ENST00000479525 PRELID3BQ9Y3B1 194 aa13.21□□□□□ -0.29
ECHDC1-216ENST00000479525 AREGP15514 252 aa13.2□□□□□ -0.3
ECHDC1-216ENST00000479525 FCGR2CP31995 323 aa13.2□□□□□ -0.3
ECHDC1-216ENST00000479525 LSM3P62310 102 aaKnown RBP13.2□□□□□ -0.3
ECHDC1-216ENST00000479525 ATP5G2Q06055 141 aa13.2□□□□□ -0.3
ECHDC1-216ENST00000479525 ARL6IP1Q15041 203 aa13.2□□□□□ -0.3
ECHDC1-216ENST00000479525 MMD2Q8IY49 270 aa13.2□□□□□ -0.3
ECHDC1-216ENST00000479525 USMG5Q96IX5 58 aa13.2□□□□□ -0.3
ECHDC1-216ENST00000479525 WFDC10AQ9H1F0 79 aa13.2□□□□□ -0.3
ECHDC1-216ENST00000479525 ZMAT4Q9H898 229 aa13.2□□□□□ -0.3
ECHDC1-216ENST00000479525 ZC4H2Q9NQZ6 224 aa13.2□□□□□ -0.3
ECHDC1-216ENST00000479525 MRPS7Q9Y2R9 242 aaKnown RBP13.2□□□□□ -0.3
ECHDC1-216ENST00000479525 KBTBD11O94819 623 aa13.2□□□□□ -0.3
ECHDC1-216ENST00000479525 CTXN2P0C2S0 81 aa13.2□□□□□ -0.3
ECHDC1-216ENST00000479525 RPL27AP46776 148 aaKnown RBP13.2□□□□□ -0.3
ECHDC1-216ENST00000479525 C15orf32Q32M92 178 aa13.2□□□□□ -0.3
ECHDC1-216ENST00000479525 CASC10Q5T4H9 136 aa13.2□□□□□ -0.3
ECHDC1-216ENST00000479525 SGPP2Q8IWX5 399 aa13.2□□□□□ -0.3
ECHDC1-216ENST00000479525 OR13F1Q8NGS4 319 aa13.2□□□□□ -0.3
ECHDC1-216ENST00000479525 OR4S2Q8NH73 311 aa13.2□□□□□ -0.3
ECHDC1-216ENST00000479525 PLEKHA3Q9HB20 300 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms