RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 MPZP25189 248 aa12.19□□□□□ -0.46
COL20A1-206ENST00000479501 GNB2P62879 340 aa12.19□□□□□ -0.46
COL20A1-206ENST00000479501 OR4F17Q8NGA8 305 aa12.19□□□□□ -0.46
COL20A1-206ENST00000479501 OR4B1Q8NGF8 309 aa12.19□□□□□ -0.46
COL20A1-206ENST00000479501 P2RX4Q99571 388 aa12.19□□□□□ -0.46
COL20A1-206ENST00000479501 J3QR06 171 aa12.18□□□□□ -0.46
COL20A1-206ENST00000479501 ZNF207O43670 478 aaKnown RBP12.18□□□□□ -0.46
COL20A1-206ENST00000479501 SSX8Q7RTT4 187 aa12.18□□□□□ -0.46
COL20A1-206ENST00000479501 PDPNQ86YL7 162 aa12.18□□□□□ -0.46
COL20A1-206ENST00000479501 GUCD1Q96NT3 240 aa12.18□□□□□ -0.46
COL20A1-206ENST00000479501 A6NDN8 102 aa12.18□□□□□ -0.46
COL20A1-206ENST00000479501 NCBP2LA6PVI3 153 aaKnown RBP12.18□□□□□ -0.46
COL20A1-206ENST00000479501 FAM90A26D6RGX4 464 aa12.18□□□□□ -0.46
COL20A1-206ENST00000479501 RPL13AP40429 203 aaKnown RBP12.18□□□□□ -0.46
COL20A1-206ENST00000479501 TMEM97Q5BJF2 176 aa12.18□□□□□ -0.46
COL20A1-206ENST00000479501 CYB5R2Q6BCY4 276 aa12.18□□□□□ -0.46
COL20A1-206ENST00000479501 BPIFA4PQ86YQ2 179 aa12.18□□□□□ -0.46
COL20A1-206ENST00000479501 OR4C12Q96R67 309 aa12.18□□□□□ -0.46
COL20A1-206ENST00000479501 IL36RNQ9UBH0 155 aa12.18□□□□□ -0.46
COL20A1-206ENST00000479501 WNT9BO14905 357 aa12.18□□□□□ -0.46
COL20A1-206ENST00000479501 CECR9P0C854 216 aa12.18□□□□□ -0.46
COL20A1-206ENST00000479501 CD1BP29016 333 aa12.18□□□□□ -0.46
COL20A1-206ENST00000479501 PSG7Q13046 419 aa12.18□□□□□ -0.46
COL20A1-206ENST00000479501 LSM10Q969L4 123 aaKnown RBP12.18□□□□□ -0.46
COL20A1-206ENST00000479501 S100A4P26447 101 aaKnown RBP12.18□□□□□ -0.46
COL20A1-206ENST00000479501 SEBOXQ9HB31 216 aaPredicted RBP12.18□□□□□ -0.46
COL20A1-206ENST00000479501 IFITM10A6NMD0 228 aa12.17□□□□□ -0.46
COL20A1-206ENST00000479501 UCP1P25874 307 aa12.17□□□□□ -0.46
COL20A1-206ENST00000479501 COL8A1P27658 744 aa12.17□□□□□ -0.46
COL20A1-206ENST00000479501 RBKSQ9H477 322 aa12.17□□□□□ -0.46
COL20A1-206ENST00000479501 UQCR10Q9UDW1 63 aa12.17□□□□□ -0.46
COL20A1-206ENST00000479501 PKDREJQ9NTG1 2253 aa12.17□□□□□ -0.46
COL20A1-206ENST00000479501 PLXNB3Q9ULL4 1909 aa12.17□□□□□ -0.46
COL20A1-206ENST00000479501 P01737 135 aa12.17□□□□□ -0.46
COL20A1-206ENST00000479501 MT-ND6P03923 174 aa12.17□□□□□ -0.46
COL20A1-206ENST00000479501 TNXAQ16473 311 aa12.17□□□□□ -0.46
COL20A1-206ENST00000479501 TEPPQ6URK8 271 aa12.17□□□□□ -0.46
COL20A1-206ENST00000479501 ASCL5Q7RTU5 278 aa12.17□□□□□ -0.46
COL20A1-206ENST00000479501 GCSAMQ8N6F7 178 aa12.17□□□□□ -0.46
COL20A1-206ENST00000479501 TAF15Q92804 592 aaKnown RBP eCLIP12.17□□□□□ -0.46
COL20A1-206ENST00000479501 WFIKKN1Q96NZ8 548 aa12.17□□□□□ -0.46
COL20A1-206ENST00000479501 RNF2Q99496 336 aa12.17□□□□□ -0.46
COL20A1-206ENST00000479501 IGKV3D-15A0A087WSY6 115 aa12.17□□□□□ -0.46
COL20A1-206ENST00000479501 K7N7A8 449 aa12.17□□□□□ -0.46
COL20A1-206ENST00000479501 ZNF524Q96C55 264 aa12.17□□□□□ -0.46
COL20A1-206ENST00000479501 DIRC2Q96SL1 478 aa12.17□□□□□ -0.46
COL20A1-206ENST00000479501 RNF126Q9BV68 326 aa12.17□□□□□ -0.46
COL20A1-206ENST00000479501 PNRC2Q9NPJ4 139 aaKnown RBP12.17□□□□□ -0.46
COL20A1-206ENST00000479501 CALYQ9NYX4 217 aa12.17□□□□□ -0.46
COL20A1-206ENST00000479501 AMMECR1Q9Y4X0 333 aaPredicted RBP12.17□□□□□ -0.46
COL20A1-206ENST00000479501 IGKV1D-8A0A087WSZ0 117 aa12.16□□□□□ -0.46
COL20A1-206ENST00000479501 IGHV1-2P23083 117 aa12.16□□□□□ -0.46
COL20A1-206ENST00000479501 CEACAM3P40198 252 aa12.16□□□□□ -0.46
COL20A1-206ENST00000479501 FOXG1P55316 489 aaPredicted RBP12.16□□□□□ -0.46
COL20A1-206ENST00000479501 TNFRSF9Q07011 255 aa12.16□□□□□ -0.46
COL20A1-206ENST00000479501 OR4A47Q6IF82 309 aa12.16□□□□□ -0.46
COL20A1-206ENST00000479501 OR1L8Q8NGR8 309 aa12.16□□□□□ -0.46
COL20A1-206ENST00000479501 C5orf63A6NC05 138 aa12.16□□□□□ -0.46
COL20A1-206ENST00000479501 CORTO00230 105 aa12.16□□□□□ -0.46
COL20A1-206ENST00000479501 ISLRO14498 428 aa12.16□□□□□ -0.46
COL20A1-206ENST00000479501 SOD3P08294 240 aa12.16□□□□□ -0.46
COL20A1-206ENST00000479501 AGAP20933 346 aa12.16□□□□□ -0.46
COL20A1-206ENST00000479501 REG1BP48304 166 aa12.16□□□□□ -0.46
COL20A1-206ENST00000479501 SPATA45Q537H7 98 aa12.16□□□□□ -0.46
COL20A1-206ENST00000479501 SLC35E4Q6ICL7 350 aa12.16□□□□□ -0.46
COL20A1-206ENST00000479501 IL19Q9UHD0 177 aa12.16□□□□□ -0.46
COL20A1-206ENST00000479501 FBLL1A6NHQ2 334 aaKnown RBP12.16□□□□□ -0.46
COL20A1-206ENST00000479501 RNF224P0DH78 156 aa12.16□□□□□ -0.46
COL20A1-206ENST00000479501 Q0VFX4 171 aa12.16□□□□□ -0.46
COL20A1-206ENST00000479501 ZDHHC8Q9ULC8 765 aa12.16□□□□□ -0.46
COL20A1-206ENST00000479501 INSIG2Q9Y5U4 225 aa12.16□□□□□ -0.46
COL20A1-206ENST00000479501 PCNX1Q96RV3 2341 aa12.16□□□□□ -0.46
COL20A1-206ENST00000479501 WISP1O95388 367 aa12.16□□□□□ -0.46
COL20A1-206ENST00000479501 CELA3BP08861 270 aa12.16□□□□□ -0.46
COL20A1-206ENST00000479501 HIST1H1EP10412 219 aaKnown RBP12.16□□□□□ -0.46
COL20A1-206ENST00000479501 SSTR5P35346 364 aa12.16□□□□□ -0.46
COL20A1-206ENST00000479501 NPVFQ9HCQ7 196 aa12.16□□□□□ -0.46
COL20A1-206ENST00000479501 MARCH11A6NNE9 402 aa12.15□□□□□ -0.46
COL20A1-206ENST00000479501 S1PR2O95136 353 aa12.15□□□□□ -0.46
COL20A1-206ENST00000479501 SFXN3Q9BWM7 321 aa12.15□□□□□ -0.46
COL20A1-206ENST00000479501 IGKV1-12A0A0C4DH73 117 aa12.15□□□□□ -0.46
COL20A1-206ENST00000479501 H0YIZ8 118 aa12.15□□□□□ -0.46
COL20A1-206ENST00000479501 IGKV1D-12P01611 117 aa12.15□□□□□ -0.46
COL20A1-206ENST00000479501 GLRXP35754 106 aa12.15□□□□□ -0.46
COL20A1-206ENST00000479501 C12orf77C9JDV5 145 aa12.15□□□□□ -0.46
COL20A1-206ENST00000479501 CCL21O00585 134 aa12.15□□□□□ -0.46
COL20A1-206ENST00000479501 GFRA1P56159 465 aa12.15□□□□□ -0.46
COL20A1-206ENST00000479501 TIMM23BQ5SRD1 257 aa12.15□□□□□ -0.46
COL20A1-206ENST00000479501 RNF144BQ7Z419 303 aa12.15□□□□□ -0.46
COL20A1-206ENST00000479501 C1orf162Q8NEQ5 155 aaPredicted RBP12.15□□□□□ -0.46
COL20A1-206ENST00000479501 PARD6GQ9BYG4 376 aaPredicted RBP12.15□□□□□ -0.46
COL20A1-206ENST00000479501 HSPB8Q9UJY1 196 aa12.15□□□□□ -0.46
COL20A1-206ENST00000479501 OR51B2Q9Y5P1 312 aa12.15□□□□□ -0.46
COL20A1-206ENST00000479501 KIAA2026Q5HYC2 2103 aa12.15□□□□□ -0.47
COL20A1-206ENST00000479501 OR4A8P0C604 315 aa12.14□□□□□ -0.47
COL20A1-206ENST00000479501 TMEM183AQ8IXX5 376 aa12.14□□□□□ -0.47
COL20A1-206ENST00000479501 ZNF714Q96N38 554 aa12.14□□□□□ -0.47
COL20A1-206ENST00000479501 TXNDC17Q9BRA2 123 aa12.14□□□□□ -0.47
COL20A1-206ENST00000479501 HEXA-AS1Q9H8Q6 139 aa12.14□□□□□ -0.47
COL20A1-206ENST00000479501 JPT1Q9UK76 154 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms