RNA–Protein interactions for RNA: ENST00000479339.5

CNKSR3-204, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best) BASIC

Gene CNKSR3, Length 2,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-204ENST00000479339 SLC7A10Q9NS82 523 aa11.09□□□□□ -0.63
CNKSR3-204ENST00000479339 MED29Q9NX70 200 aa11.09□□□□□ -0.63
CNKSR3-204ENST00000479339 PHF3Q92576 2039 aaKnown RBP11.09□□□□□ -0.63
CNKSR3-204ENST00000479339 H0YIG0 161 aa11.09□□□□□ -0.63
CNKSR3-204ENST00000479339 TAX1BP3O14907 124 aa11.09□□□□□ -0.63
CNKSR3-204ENST00000479339 PDCD6O75340 191 aa11.09□□□□□ -0.63
CNKSR3-204ENST00000479339 NXPH3O95157 252 aa11.09□□□□□ -0.63
CNKSR3-204ENST00000479339 CD46P15529 392 aa11.09□□□□□ -0.63
CNKSR3-204ENST00000479339 COX5AP20674 150 aa11.09□□□□□ -0.63
CNKSR3-204ENST00000479339 TIMP3P35625 211 aa11.09□□□□□ -0.63
CNKSR3-204ENST00000479339 CLRN1P58418 232 aa11.09□□□□□ -0.63
CNKSR3-204ENST00000479339 ARL16Q0P5N6 197 aa11.09□□□□□ -0.63
CNKSR3-204ENST00000479339 MALLQ13021 153 aa11.09□□□□□ -0.63
CNKSR3-204ENST00000479339 IGFL2Q6UWQ7 119 aa11.09□□□□□ -0.63
CNKSR3-204ENST00000479339 PRSS57Q6UWY2 283 aa11.09□□□□□ -0.63
CNKSR3-204ENST00000479339 ZNF818PQ6ZRF7 136 aa11.09□□□□□ -0.63
CNKSR3-204ENST00000479339 GAPTQ8N292 157 aa11.09□□□□□ -0.63
CNKSR3-204ENST00000479339 LSM10Q969L4 123 aaKnown RBP11.09□□□□□ -0.63
CNKSR3-204ENST00000479339 SFXN3Q9BWM7 321 aa11.09□□□□□ -0.63
CNKSR3-204ENST00000479339 RTN4RQ9BZR6 473 aa11.09□□□□□ -0.63
CNKSR3-204ENST00000479339 GNB4Q9HAV0 340 aa11.09□□□□□ -0.63
CNKSR3-204ENST00000479339 IL36GQ9NZH8 169 aa11.09□□□□□ -0.63
CNKSR3-204ENST00000479339 GAGE12BA1L429 117 aa11.08□□□□□ -0.64
CNKSR3-204ENST00000479339 CYC1P08574 325 aa11.08□□□□□ -0.64
CNKSR3-204ENST00000479339 NPPCP23582 126 aa11.08□□□□□ -0.64
CNKSR3-204ENST00000479339 CLDN15P56746 228 aa11.08□□□□□ -0.64
CNKSR3-204ENST00000479339 SLC38A11Q08AI6 406 aa11.08□□□□□ -0.64
CNKSR3-204ENST00000479339 Q0VFX4 171 aa11.08□□□□□ -0.64
CNKSR3-204ENST00000479339 MRPL49Q13405 166 aaKnown RBP11.08□□□□□ -0.64
CNKSR3-204ENST00000479339 CNN3Q15417 329 aaKnown RBP11.08□□□□□ -0.64
CNKSR3-204ENST00000479339 Q6ZS92 163 aa11.08□□□□□ -0.64
CNKSR3-204ENST00000479339 HAPLN4Q86UW8 402 aa11.08□□□□□ -0.64
CNKSR3-204ENST00000479339 BATF2Q8N1L9 274 aa11.08□□□□□ -0.64
CNKSR3-204ENST00000479339 ZADH2Q8N4Q0 377 aa11.08□□□□□ -0.64
CNKSR3-204ENST00000479339 DEFB125Q8N687 156 aa11.08□□□□□ -0.64
CNKSR3-204ENST00000479339 PIGLQ9Y2B2 252 aa11.08□□□□□ -0.64
CNKSR3-204ENST00000479339 MYO18BQ8IUG5 2567 aa11.08□□□□□ -0.64
CNKSR3-204ENST00000479339 UBR5O95071 2799 aaPredicted RBP11.08□□□□□ -0.64
CNKSR3-204ENST00000479339 LOC102723996A0A087X1L8 192 aa11.08□□□□□ -0.64
CNKSR3-204ENST00000479339 UBE2L5PA0A1B0GUS4 154 aa11.08□□□□□ -0.64
CNKSR3-204ENST00000479339 A0A1W2PS18 150 aa11.08□□□□□ -0.64
CNKSR3-204ENST00000479339 IGHG1P01857 330 aa11.08□□□□□ -0.64
CNKSR3-204ENST00000479339 COX6A1P12074 109 aa11.08□□□□□ -0.64
CNKSR3-204ENST00000479339 IL11P20809 199 aa11.08□□□□□ -0.64
CNKSR3-204ENST00000479339 LGALS4P56470 323 aa11.08□□□□□ -0.64
CNKSR3-204ENST00000479339 GNB1P62873 340 aa11.08□□□□□ -0.64
CNKSR3-204ENST00000479339 HIST3H3Q16695 136 aa11.08□□□□□ -0.64
CNKSR3-204ENST00000479339 ACSM6Q6P461 480 aa11.08□□□□□ -0.64
CNKSR3-204ENST00000479339 OR10P1Q8NGE3 313 aa11.08□□□□□ -0.64
CNKSR3-204ENST00000479339 OR10V1Q8NGI7 309 aa11.08□□□□□ -0.64
CNKSR3-204ENST00000479339 THAP3Q8WTV1 239 aaPredicted RBP11.08□□□□□ -0.64
CNKSR3-204ENST00000479339 ALKBH4Q9NXW9 302 aa11.08□□□□□ -0.64
CNKSR3-204ENST00000479339 LRP5LA4QPB2 252 aa11.07□□□□□ -0.64
CNKSR3-204ENST00000479339 LIPT2A6NK58 231 aa11.07□□□□□ -0.64
CNKSR3-204ENST00000479339 SNURFLB1AK76 121 aa11.07□□□□□ -0.64
CNKSR3-204ENST00000479339 RBPJQ06330 500 aa11.07□□□□□ -0.64
CNKSR3-204ENST00000479339 PRR30Q53SZ7 412 aaPredicted RBP11.07□□□□□ -0.64
CNKSR3-204ENST00000479339 KIAA2026Q5HYC2 2103 aa11.07□□□□□ -0.64
CNKSR3-204ENST00000479339 OSR2Q8N2R0 312 aa11.07□□□□□ -0.64
CNKSR3-204ENST00000479339 GATAD1Q8WUU5 269 aa11.07□□□□□ -0.64
CNKSR3-204ENST00000479339 ST8SIA1Q92185 356 aa11.07□□□□□ -0.64
CNKSR3-204ENST00000479339 IGHV1-45A0A0A0MS14 117 aa11.06□□□□□ -0.64
CNKSR3-204ENST00000479339 F2Z2F3 143 aa11.06□□□□□ -0.64
CNKSR3-204ENST00000479339 RER1O15258 196 aa11.06□□□□□ -0.64
CNKSR3-204ENST00000479339 TUSC2O75896 110 aa11.06□□□□□ -0.64
CNKSR3-204ENST00000479339 PMCHP20382 165 aa11.06□□□□□ -0.64
CNKSR3-204ENST00000479339 SRD5A2P31213 254 aa11.06□□□□□ -0.64
CNKSR3-204ENST00000479339 PAX2Q02962 417 aa11.06□□□□□ -0.64
CNKSR3-204ENST00000479339 SRSF1Q07955 248 aaKnown RBP eCLIP11.06□□□□□ -0.642e-7■■■■□ 26.1
CNKSR3-204ENST00000479339 SLC25A47Q6Q0C1 308 aa11.06□□□□□ -0.64
CNKSR3-204ENST00000479339 C12orf54Q6X4T0 127 aa11.06□□□□□ -0.64
CNKSR3-204ENST00000479339 LHFPL2Q6ZUX7 228 aa11.06□□□□□ -0.64
CNKSR3-204ENST00000479339 ADIPOR1Q96A54 375 aa11.06□□□□□ -0.64
CNKSR3-204ENST00000479339 CD300LBA8K4G0 201 aa11.06□□□□□ -0.64
CNKSR3-204ENST00000479339 FAM90A26D6RGX4 464 aa11.06□□□□□ -0.64
CNKSR3-204ENST00000479339 RBFOX2O43251 390 aaKnown RBP eCLIP11.06□□□□□ -0.64
CNKSR3-204ENST00000479339 CA2P00918 260 aa11.06□□□□□ -0.64
CNKSR3-204ENST00000479339 F2RP25116 425 aa11.06□□□□□ -0.64
CNKSR3-204ENST00000479339 THBS3P49746 956 aa11.06□□□□□ -0.64
CNKSR3-204ENST00000479339 PSG4Q00888 419 aa11.06□□□□□ -0.64
CNKSR3-204ENST00000479339 MFAP5Q13361 173 aa11.06□□□□□ -0.64
CNKSR3-204ENST00000479339 PCOLCEQ15113 449 aa11.06□□□□□ -0.64
CNKSR3-204ENST00000479339 ZNF324BQ6AW86 544 aaPredicted RBP11.06□□□□□ -0.64
CNKSR3-204ENST00000479339 TMEM147Q9BVK8 224 aa11.06□□□□□ -0.64
CNKSR3-204ENST00000479339 PEF1Q9UBV8 284 aaKnown RBP11.06□□□□□ -0.64
CNKSR3-204ENST00000479339 LY96Q9Y6Y9 160 aa11.06□□□□□ -0.64
CNKSR3-204ENST00000479339 ALPK2Q86TB3 2170 aa11.05□□□□□ -0.64
CNKSR3-204ENST00000479339 SLC22A20A6NK97 555 aa11.05□□□□□ -0.64
CNKSR3-204ENST00000479339 AHRRA9YTQ3 701 aa11.05□□□□□ -0.64
CNKSR3-204ENST00000479339 G3V4G9 280 aa11.05□□□□□ -0.64
CNKSR3-204ENST00000479339 H0YJW9 148 aa11.05□□□□□ -0.64
CNKSR3-204ENST00000479339 M0R1X1 148 aa11.05□□□□□ -0.64
CNKSR3-204ENST00000479339 PRKNO60260 465 aaPredicted RBP11.05□□□□□ -0.64
CNKSR3-204ENST00000479339 SERPINE2P07093 398 aa11.05□□□□□ -0.64
CNKSR3-204ENST00000479339 GNLYP22749 145 aa11.05□□□□□ -0.64
CNKSR3-204ENST00000479339 ANOS1P23352 680 aa11.05□□□□□ -0.64
CNKSR3-204ENST00000479339 IER3P46695 156 aa11.05□□□□□ -0.64
CNKSR3-204ENST00000479339 UQCRFS1P47985 274 aa11.05□□□□□ -0.64
CNKSR3-204ENST00000479339 ZNF83P51522 516 aa11.05□□□□□ -0.64
CNKSR3-204ENST00000479339 GFRA1P56159 465 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms