RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 THNSL2Q86YJ6 484 aa10.46□□□□□ -0.73
CHD3-210ENST00000479080 PUSL1Q8N0Z8 303 aaKnown RBP10.46□□□□□ -0.73
CHD3-210ENST00000479080 OR11H7Q8NGC8 314 aa10.46□□□□□ -0.73
CHD3-210ENST00000479080 RBPMSQ93062 196 aaKnown RBP10.46□□□□□ -0.73
CHD3-210ENST00000479080 IL22RA2Q969J5 263 aa10.46□□□□□ -0.73
CHD3-210ENST00000479080 GPR146Q96CH1 333 aa10.46□□□□□ -0.73
CHD3-210ENST00000479080 R3HDM4Q96D70 268 aa10.46□□□□□ -0.73
CHD3-210ENST00000479080 HARBI1Q96MB7 349 aa10.46□□□□□ -0.73
CHD3-210ENST00000479080 COMMD9Q9P000 198 aa10.46□□□□□ -0.73
CHD3-210ENST00000479080 KCNIP3Q9Y2W7 256 aa10.46□□□□□ -0.73
CHD3-210ENST00000479080 hCG_2014768A0A024R1R8 64 aa10.45□□□□□ -0.74
CHD3-210ENST00000479080 NDUFA3O95167 84 aa10.45□□□□□ -0.74
CHD3-210ENST00000479080 SERPINE2P07093 398 aa10.45□□□□□ -0.74
CHD3-210ENST00000479080 HOXB5P09067 269 aa10.45□□□□□ -0.74
CHD3-210ENST00000479080 OR9G9P0C7N8 305 aa10.45□□□□□ -0.74
CHD3-210ENST00000479080 RRASP10301 218 aa10.45□□□□□ -0.74
CHD3-210ENST00000479080 CXCL3P19876 107 aa10.45□□□□□ -0.74
CHD3-210ENST00000479080 IER3P46695 156 aa10.45□□□□□ -0.74
CHD3-210ENST00000479080 TAGLNQ01995 201 aaKnown RBP10.45□□□□□ -0.74
CHD3-210ENST00000479080 PSG5Q15238 335 aa10.45□□□□□ -0.74
CHD3-210ENST00000479080 AANATQ16613 207 aa10.45□□□□□ -0.74
CHD3-210ENST00000479080 RTL8BQ17RB0 113 aa10.45□□□□□ -0.74
CHD3-210ENST00000479080 GGNBP1Q5YKI7 109 aa10.45□□□□□ -0.74
CHD3-210ENST00000479080 TMEM219Q86XT9 240 aa10.45□□□□□ -0.74
CHD3-210ENST00000479080 LGI3Q8N145 548 aa10.45□□□□□ -0.74
CHD3-210ENST00000479080 OSR1Q8TAX0 266 aaPredicted RBP10.45□□□□□ -0.74
CHD3-210ENST00000479080 CD300LFQ8TDQ1 290 aa10.45□□□□□ -0.74
CHD3-210ENST00000479080 CHAC2Q8WUX2 184 aa10.45□□□□□ -0.74
CHD3-210ENST00000479080 FLYWCH2Q96CP2 140 aaKnown RBP10.45□□□□□ -0.74
CHD3-210ENST00000479080 GPN1Q9HCN4 374 aaPredicted RBP10.45□□□□□ -0.74
CHD3-210ENST00000479080 ESM1Q9NQ30 184 aa10.45□□□□□ -0.74
CHD3-210ENST00000479080 TCF19Q9Y242 345 aa10.45□□□□□ -0.74
CHD3-210ENST00000479080 FAM96BQ9Y3D0 163 aa10.45□□□□□ -0.74
CHD3-210ENST00000479080 MARCH11A6NNE9 402 aa10.44□□□□□ -0.74
CHD3-210ENST00000479080 CHST1O43916 411 aa10.44□□□□□ -0.74
CHD3-210ENST00000479080 SIX6O95475 246 aa10.44□□□□□ -0.74
CHD3-210ENST00000479080 MOSP00540 346 aa10.44□□□□□ -0.74
CHD3-210ENST00000479080 KRASP01116 189 aa10.44□□□□□ -0.74
CHD3-210ENST00000479080 AMY1AP04745 511 aa10.44□□□□□ -0.74
CHD3-210ENST00000479080 SULT1A3P0DMM9 295 aa10.44□□□□□ -0.74
CHD3-210ENST00000479080 SULT1A4P0DMN0 295 aa10.44□□□□□ -0.74
CHD3-210ENST00000479080 ANXA3P12429 323 aa10.44□□□□□ -0.74
CHD3-210ENST00000479080 MYOD1P15172 320 aa10.44□□□□□ -0.74
CHD3-210ENST00000479080 RPS16P62249 146 aaKnown RBP10.44□□□□□ -0.74
CHD3-210ENST00000479080 LY6EQ16553 131 aa10.44□□□□□ -0.74
CHD3-210ENST00000479080 SSX9Q7RTT3 188 aa10.44□□□□□ -0.74
CHD3-210ENST00000479080 FAM219AQ8IW50 185 aa10.44□□□□□ -0.74
CHD3-210ENST00000479080 TEX29Q8N6K0 151 aa10.44□□□□□ -0.74
CHD3-210ENST00000479080 Q8N9W7 124 aa10.44□□□□□ -0.74
CHD3-210ENST00000479080 NPBQ8NG41 125 aa10.44□□□□□ -0.74
CHD3-210ENST00000479080 OR4C13Q8NGP0 309 aa10.44□□□□□ -0.74
CHD3-210ENST00000479080 OR2T10Q8NGZ9 312 aa10.44□□□□□ -0.74
CHD3-210ENST00000479080 COQ8AQ8NI60 647 aa10.44□□□□□ -0.74
CHD3-210ENST00000479080 OR10C1Q96KK4 312 aa10.44□□□□□ -0.74
CHD3-210ENST00000479080 PHB2Q99623 299 aa10.44□□□□□ -0.74
CHD3-210ENST00000479080 TMEM140Q9NV12 185 aa10.44□□□□□ -0.74
CHD3-210ENST00000479080 NSD1Q96L73 2696 aaPredicted RBP10.44□□□□□ -0.74
CHD3-210ENST00000479080 SHOXO15266 292 aa10.43□□□□□ -0.74
CHD3-210ENST00000479080 HOXA3O43365 443 aaPredicted RBP10.43□□□□□ -0.74
CHD3-210ENST00000479080 SLC25A17O43808 307 aa10.43□□□□□ -0.74
CHD3-210ENST00000479080 NQO2P16083 231 aa10.43□□□□□ -0.74
CHD3-210ENST00000479080 TMEM11P17152 192 aa10.43□□□□□ -0.74
CHD3-210ENST00000479080 HLA-GP17693 338 aa10.43□□□□□ -0.74
CHD3-210ENST00000479080 HNF1AP20823 631 aa10.43□□□□□ -0.74
CHD3-210ENST00000479080 BRS3P32247 399 aa10.43□□□□□ -0.74
CHD3-210ENST00000479080 H2BFSP57053 126 aa10.43□□□□□ -0.74
CHD3-210ENST00000479080 UBE2KP61086 200 aa10.43□□□□□ -0.74
CHD3-210ENST00000479080 RRAS2P62070 204 aaPredicted RBP10.43□□□□□ -0.74
CHD3-210ENST00000479080 SRPXP78539 464 aa10.43□□□□□ -0.74
CHD3-210ENST00000479080 HES1Q14469 280 aa10.43□□□□□ -0.74
CHD3-210ENST00000479080 OR4A47Q6IF82 309 aa10.43□□□□□ -0.74
CHD3-210ENST00000479080 C11orf87Q6NUJ2 197 aa10.43□□□□□ -0.74
CHD3-210ENST00000479080 ZNF695Q8IW36 515 aa10.43□□□□□ -0.74
CHD3-210ENST00000479080 FAM71E2Q8N5Q1 922 aa10.43□□□□□ -0.74
CHD3-210ENST00000479080 UXS1Q8NBZ7 420 aa10.43□□□□□ -0.74
CHD3-210ENST00000479080 OR5M8Q8NGP6 311 aa10.43□□□□□ -0.74
CHD3-210ENST00000479080 RHOVQ96L33 236 aa10.43□□□□□ -0.74
CHD3-210ENST00000479080 FBXL15Q9H469 300 aa10.43□□□□□ -0.74
CHD3-210ENST00000479080 CDC42EP3Q9UKI2 254 aa10.43□□□□□ -0.74
CHD3-210ENST00000479080 NSG2Q9Y328 171 aa10.43□□□□□ -0.74
CHD3-210ENST00000479080 HIVEP2P31629 2446 aa10.42□□□□□ -0.74
CHD3-210ENST00000479080 NAV3Q8IVL0 2385 aa10.42□□□□□ -0.74
CHD3-210ENST00000479080 A0A1B0GW64 132 aa10.42□□□□□ -0.74
CHD3-210ENST00000479080 DUXBA0A1W2PPF3 345 aa10.42□□□□□ -0.74
CHD3-210ENST00000479080 SH2D7A6NKC9 451 aaPredicted RBP10.42□□□□□ -0.74
CHD3-210ENST00000479080 FCN1O00602 326 aa10.42□□□□□ -0.74
CHD3-210ENST00000479080 GOSR2O14653 212 aa10.42□□□□□ -0.74
CHD3-210ENST00000479080 RRHO14718 337 aa10.42□□□□□ -0.74
CHD3-210ENST00000479080 NBR2O15453 112 aa10.42□□□□□ -0.74
CHD3-210ENST00000479080 CRLF1O75462 422 aa10.42□□□□□ -0.74
CHD3-210ENST00000479080 SRD5A1P18405 259 aa10.42□□□□□ -0.74
CHD3-210ENST00000479080 RELBQ01201 579 aa10.42□□□□□ -0.74
CHD3-210ENST00000479080 PJVKQ0ZLH3 352 aa10.42□□□□□ -0.74
CHD3-210ENST00000479080 IL15RAQ13261 267 aa10.42□□□□□ -0.74
CHD3-210ENST00000479080 TMEM167AQ8TBQ9 72 aa10.42□□□□□ -0.74
CHD3-210ENST00000479080 LSM10Q969L4 123 aaKnown RBP10.42□□□□□ -0.74
CHD3-210ENST00000479080 RBM14Q96PK6 669 aaKnown RBP10.42□□□□□ -0.74
CHD3-210ENST00000479080 DUX5Q96PT3 197 aa10.42□□□□□ -0.74
CHD3-210ENST00000479080 RNF5Q99942 180 aa10.42□□□□□ -0.74
CHD3-210ENST00000479080 RAB18Q9NP72 206 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms