RNA–Protein interactions for RNA: ENST00000478743.1

HDAC8-217, Transcript of histone deacetylase 8, humanhuman

TSL 4

Gene HDAC8, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-217ENST00000478743 S100A13Q99584 98 aa8.61□□□□□ -1.03
HDAC8-217ENST00000478743 SPIN2AQ99865 258 aa8.61□□□□□ -1.03
HDAC8-217ENST00000478743 SPIN2BQ9BPZ2 258 aa8.61□□□□□ -1.03
HDAC8-217ENST00000478743 SRSF8Q9BRL6 282 aaKnown RBP8.61□□□□□ -1.03
HDAC8-217ENST00000478743 RNF167Q9H6Y7 350 aa8.61□□□□□ -1.03
HDAC8-217ENST00000478743 ABRACLQ9P1F3 81 aa8.61□□□□□ -1.03
HDAC8-217ENST00000478743 TBC1D24Q9ULP9 559 aa8.61□□□□□ -1.03
HDAC8-217ENST00000478743 PKHD1L1Q86WI1 4243 aa8.6□□□□□ -1.03
HDAC8-217ENST00000478743 IGLV11-55A0A075B6I3 123 aa8.6□□□□□ -1.03
HDAC8-217ENST00000478743 MRPS14O60783 128 aaKnown RBP8.6□□□□□ -1.03
HDAC8-217ENST00000478743 PDCD6O75340 191 aa8.6□□□□□ -1.03
HDAC8-217ENST00000478743 RAP2AP10114 183 aa8.6□□□□□ -1.03
HDAC8-217ENST00000478743 MGMTP16455 207 aa8.6□□□□□ -1.03
HDAC8-217ENST00000478743 ATP6V1E1P36543 226 aa8.6□□□□□ -1.03
HDAC8-217ENST00000478743 CAPGP40121 348 aa8.6□□□□□ -1.03
HDAC8-217ENST00000478743 CEACAM6P40199 344 aa8.6□□□□□ -1.03
HDAC8-217ENST00000478743 VMA21Q3ZAQ7 101 aa8.6□□□□□ -1.03
HDAC8-217ENST00000478743 PLET1Q6UQ28 207 aa8.6□□□□□ -1.03
HDAC8-217ENST00000478743 GLIPR1L1Q6UWM5 242 aa8.6□□□□□ -1.03
HDAC8-217ENST00000478743 TRPT1Q86TN4 253 aaKnown RBP8.6□□□□□ -1.03
HDAC8-217ENST00000478743 SETD6Q8TBK2 473 aa8.6□□□□□ -1.03
HDAC8-217ENST00000478743 ZNF184Q99676 751 aaPredicted RBP8.6□□□□□ -1.03
HDAC8-217ENST00000478743 HDHD3Q9BSH5 251 aaPredicted RBP8.6□□□□□ -1.03
HDAC8-217ENST00000478743 C20orf24Q9BUV8 137 aa8.6□□□□□ -1.03
HDAC8-217ENST00000478743 IGKV1-6A0A0C4DH72 117 aa8.59□□□□□ -1.03
HDAC8-217ENST00000478743 CCDC22O60826 627 aa8.59□□□□□ -1.03
HDAC8-217ENST00000478743 ZNF780AO75290 641 aaPredicted RBP8.59□□□□□ -1.03
HDAC8-217ENST00000478743 CRYZL1O95825 349 aa8.59□□□□□ -1.03
HDAC8-217ENST00000478743 RPSAP08865 295 aaKnown RBP8.59□□□□□ -1.03
HDAC8-217ENST00000478743 KLK9Q2XQG4 91 aa8.59□□□□□ -1.03
HDAC8-217ENST00000478743 GLT8D1Q68CQ7 371 aa8.59□□□□□ -1.03
HDAC8-217ENST00000478743 DEFB107AQ8IZN7 70 aa8.59□□□□□ -1.03
HDAC8-217ENST00000478743 OR5AK2Q8NH90 309 aa8.59□□□□□ -1.03
HDAC8-217ENST00000478743 CMTM5Q96DZ9 223 aa8.59□□□□□ -1.03
HDAC8-217ENST00000478743 FYTTD1Q96QD9 318 aaKnown RBP8.59□□□□□ -1.03
HDAC8-217ENST00000478743 FAAP24Q9BTP7 215 aa8.59□□□□□ -1.03
HDAC8-217ENST00000478743 KRTAP9-2Q9BYQ4 174 aa8.59□□□□□ -1.03
HDAC8-217ENST00000478743 TMEM138Q9NPI0 162 aa8.59□□□□□ -1.03
HDAC8-217ENST00000478743 PAK1IP1Q9NWT1 392 aaPredicted RBP8.59□□□□□ -1.03
HDAC8-217ENST00000478743 SDHAF2Q9NX18 166 aa8.59□□□□□ -1.03
HDAC8-217ENST00000478743 ZNF221Q9UK13 617 aa8.59□□□□□ -1.03
HDAC8-217ENST00000478743 KLK9Q9UKQ9 250 aa8.59□□□□□ -1.03
HDAC8-217ENST00000478743 DNAH8Q96JB1 4490 aa8.58□□□□□ -1.04
HDAC8-217ENST00000478743 IGHV3OR16-13A0A075B7E8 117 aa8.58□□□□□ -1.04
HDAC8-217ENST00000478743 TRBV5-7A0A0A0MS05 114 aa8.58□□□□□ -1.04
HDAC8-217ENST00000478743 TRBV7-1A0A0A6YYK4 115 aa8.58□□□□□ -1.04
HDAC8-217ENST00000478743 IGHV3-74A0A0B4J1X5 117 aa8.58□□□□□ -1.04
HDAC8-217ENST00000478743 DAPL1A0PJW8 107 aa8.58□□□□□ -1.04
HDAC8-217ENST00000478743 OR2T8A6NH00 312 aa8.58□□□□□ -1.04
HDAC8-217ENST00000478743 GNGT2O14610 69 aa8.58□□□□□ -1.04
HDAC8-217ENST00000478743 CHEK1O14757 476 aa8.58□□□□□ -1.04
HDAC8-217ENST00000478743 TGOLN2O43493 480 aa8.58□□□□□ -1.04
HDAC8-217ENST00000478743 NAPSAO96009 420 aa8.58□□□□□ -1.04
HDAC8-217ENST00000478743 CRYGCP07315 174 aa8.58□□□□□ -1.04
HDAC8-217ENST00000478743 BTF3P20290 206 aaKnown RBP8.58□□□□□ -1.04
HDAC8-217ENST00000478743 NPY1RP25929 384 aa8.58□□□□□ -1.04
HDAC8-217ENST00000478743 BDKRB2P30411 391 aa8.58□□□□□ -1.04
HDAC8-217ENST00000478743 FAM90A2PQ658T7 463 aa8.58□□□□□ -1.04
HDAC8-217ENST00000478743 ZNF66Q6ZN08 573 aa8.58□□□□□ -1.04
HDAC8-217ENST00000478743 C6orf201Q7Z4U5 140 aa8.58□□□□□ -1.04
HDAC8-217ENST00000478743 SLC25A42Q86VD7 318 aa8.58□□□□□ -1.04
HDAC8-217ENST00000478743 PTX4Q96A99 478 aa8.58□□□□□ -1.04
HDAC8-217ENST00000478743 FAM210BQ96KR6 192 aa8.58□□□□□ -1.04
HDAC8-217ENST00000478743 PRRG3Q9BZD7 231 aa8.58□□□□□ -1.04
HDAC8-217ENST00000478743 TMED3Q9Y3Q3 217 aa8.58□□□□□ -1.04
HDAC8-217ENST00000478743 CGB1A6NKQ9 187 aa8.57□□□□□ -1.04
HDAC8-217ENST00000478743 TMEM212A6NML5 194 aa8.57□□□□□ -1.04
HDAC8-217ENST00000478743 KNCNA6PVL3 124 aa8.57□□□□□ -1.04
HDAC8-217ENST00000478743 FAM229AH3BQW9 127 aa8.57□□□□□ -1.04
HDAC8-217ENST00000478743 CRTAPO75718 401 aaPredicted RBP8.57□□□□□ -1.04
HDAC8-217ENST00000478743 GLAP06280 429 aa8.57□□□□□ -1.04
HDAC8-217ENST00000478743 CD3GP09693 182 aa8.57□□□□□ -1.04
HDAC8-217ENST00000478743 PRDX6P30041 224 aa8.57□□□□□ -1.04
HDAC8-217ENST00000478743 GTF2A1P52655 376 aaPredicted RBP8.57□□□□□ -1.04
HDAC8-217ENST00000478743 EMP1P54849 157 aa8.57□□□□□ -1.04
HDAC8-217ENST00000478743 FAM3BP58499 235 aaPredicted RBP8.57□□□□□ -1.04
HDAC8-217ENST00000478743 HLA-DRB3P79483 266 aa8.57□□□□□ -1.04
HDAC8-217ENST00000478743 ICAM4Q14773 271 aa8.57□□□□□ -1.04
HDAC8-217ENST00000478743 CDK10Q15131 360 aa8.57□□□□□ -1.04
HDAC8-217ENST00000478743 STHQ8IWL8 128 aa8.57□□□□□ -1.04
HDAC8-217ENST00000478743 VKORC1L1Q8N0U8 176 aa8.57□□□□□ -1.04
HDAC8-217ENST00000478743 NEDD4LQ96PU5 975 aa8.57□□□□□ -1.04
HDAC8-217ENST00000478743 RHPN1-AS1Q9BWJ2 59 aa8.57□□□□□ -1.04
HDAC8-217ENST00000478743 OR2D2Q9H210 308 aa8.57□□□□□ -1.04
HDAC8-217ENST00000478743 TMEM14BQ9NUH8 114 aa8.57□□□□□ -1.04
HDAC8-217ENST00000478743 SMPXQ9UHP9 88 aa8.57□□□□□ -1.04
HDAC8-217ENST00000478743 LRRC42Q9Y546 428 aa8.57□□□□□ -1.04
HDAC8-217ENST00000478743 TRAV8-7A0A075B6U6 113 aa8.56□□□□□ -1.04
HDAC8-217ENST00000478743 LINC00473A8K010 186 aa8.56□□□□□ -1.04
HDAC8-217ENST00000478743 DYNC1I1O14576 645 aa8.56□□□□□ -1.04
HDAC8-217ENST00000478743 IGFBP3P17936 291 aaPredicted RBP8.56□□□□□ -1.04
HDAC8-217ENST00000478743 POLR2IP36954 125 aaKnown RBP8.56□□□□□ -1.04
HDAC8-217ENST00000478743 XAF1Q6GPH4 301 aa8.56□□□□□ -1.04
HDAC8-217ENST00000478743 DHFR2Q86XF0 187 aa8.56□□□□□ -1.04
HDAC8-217ENST00000478743 OR2A7Q96R45 310 aa8.56□□□□□ -1.04
HDAC8-217ENST00000478743 ATG101Q9BSB4 218 aa8.56□□□□□ -1.04
HDAC8-217ENST00000478743 RIBC2Q9H4K1 309 aa8.56□□□□□ -1.04
HDAC8-217ENST00000478743 ARL8BQ9NVJ2 186 aa8.56□□□□□ -1.04
HDAC8-217ENST00000478743 RDH8Q9NYR8 311 aa8.56□□□□□ -1.04
HDAC8-217ENST00000478743 AASSQ9UDR5 926 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms