RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 GPX8Q8TED1 209 aa2.48□□□□□ -2.01
CDC42BPA-212ENST00000478573 TAMM41Q96BW9 452 aa2.48□□□□□ -2.01
CDC42BPA-212ENST00000478573 C12orf43Q96C57 262 aaKnown RBP2.48□□□□□ -2.01
CDC42BPA-212ENST00000478573 KCNS3Q9BQ31 491 aa2.48□□□□□ -2.01
CDC42BPA-212ENST00000478573 PRSS27Q9BQR3 290 aa2.48□□□□□ -2.01
CDC42BPA-212ENST00000478573 ULBP2Q9BZM5 246 aa2.48□□□□□ -2.01
CDC42BPA-212ENST00000478573 NDEL1Q9GZM8 345 aa2.48□□□□□ -2.01
CDC42BPA-212ENST00000478573 MYEF2Q9P2K5 600 aaKnown RBP2.48□□□□□ -2.01
CDC42BPA-212ENST00000478573 RCL1Q9Y2P8 373 aaKnown RBP2.48□□□□□ -2.01
CDC42BPA-212ENST00000478573 MTORP42345 2549 aa2.47□□□□□ -2.01
CDC42BPA-212ENST00000478573 MAP1AP78559 2803 aaPredicted RBP2.47□□□□□ -2.01
CDC42BPA-212ENST00000478573 SONP18583 2426 aaKnown RBP2.47□□□□□ -2.01
CDC42BPA-212ENST00000478573 ARHGAP32A7KAX9 2087 aa2.47□□□□□ -2.01
CDC42BPA-212ENST00000478573 A0A096LNT2 108 aa2.47□□□□□ -2.01
CDC42BPA-212ENST00000478573 IGHV2OR16-5A0A0B4J2B6 119 aa2.47□□□□□ -2.01
CDC42BPA-212ENST00000478573 IGHV1-18A0A0C4DH31 117 aa2.47□□□□□ -2.01
CDC42BPA-212ENST00000478573 LOC100653049A0A140TA62 436 aa2.47□□□□□ -2.01
CDC42BPA-212ENST00000478573 A0A1W2PRD5 423 aa2.47□□□□□ -2.01
CDC42BPA-212ENST00000478573 CPSF4LA6NMK7 179 aaKnown RBP2.47□□□□□ -2.01
CDC42BPA-212ENST00000478573 E7EQL1 145 aa2.47□□□□□ -2.01
CDC42BPA-212ENST00000478573 ATP6V1G2-DDX39BF2Z307 99 aa2.47□□□□□ -2.01
CDC42BPA-212ENST00000478573 M0R1B8 84 aa2.47□□□□□ -2.01
CDC42BPA-212ENST00000478573 NME4O00746 187 aa2.47□□□□□ -2.01
CDC42BPA-212ENST00000478573 PLPP3O14495 311 aa2.47□□□□□ -2.01
CDC42BPA-212ENST00000478573 AKR7A2O43488 359 aa2.47□□□□□ -2.01
CDC42BPA-212ENST00000478573 KRT34O76011 436 aa2.47□□□□□ -2.01
CDC42BPA-212ENST00000478573 GABARAPO95166 117 aa2.47□□□□□ -2.01
CDC42BPA-212ENST00000478573 FARS2O95363 451 aaKnown RBP2.47□□□□□ -2.01
CDC42BPA-212ENST00000478573 SNAP29O95721 258 aa2.47□□□□□ -2.01
CDC42BPA-212ENST00000478573 RAB36O95755 333 aa2.47□□□□□ -2.01
CDC42BPA-212ENST00000478573 PTTG1O95997 202 aa2.47□□□□□ -2.01
CDC42BPA-212ENST00000478573 PTHP01270 115 aa2.47□□□□□ -2.01
CDC42BPA-212ENST00000478573 IFNW1P05000 195 aa2.47□□□□□ -2.01
CDC42BPA-212ENST00000478573 SOD3P08294 240 aa2.47□□□□□ -2.01
CDC42BPA-212ENST00000478573 CECR9P0C854 216 aa2.47□□□□□ -2.01
CDC42BPA-212ENST00000478573 UBCP0CG48 685 aaKnown RBP2.47□□□□□ -2.01
CDC42BPA-212ENST00000478573 PGA4P0DJD7 388 aa2.47□□□□□ -2.01
CDC42BPA-212ENST00000478573 PGA3P0DJD8 388 aa2.47□□□□□ -2.01
CDC42BPA-212ENST00000478573 CBR1P16152 277 aa2.47□□□□□ -2.01
CDC42BPA-212ENST00000478573 ZNF823P16415 610 aa2.47□□□□□ -2.01
CDC42BPA-212ENST00000478573 ZNF14P17017 642 aaPredicted RBP2.47□□□□□ -2.01
CDC42BPA-212ENST00000478573 RAB4AP20338 218 aa2.47□□□□□ -2.01
CDC42BPA-212ENST00000478573 M6PRP20645 277 aa2.47□□□□□ -2.01
CDC42BPA-212ENST00000478573 KDELR2P33947 212 aa2.47□□□□□ -2.01
CDC42BPA-212ENST00000478573 ARR3P36575 388 aa2.47□□□□□ -2.01
CDC42BPA-212ENST00000478573 ETV6P41212 452 aa2.47□□□□□ -2.01
CDC42BPA-212ENST00000478573 EVX1P49640 407 aa2.47□□□□□ -2.01
CDC42BPA-212ENST00000478573 FABP6P51161 128 aa2.47□□□□□ -2.01
CDC42BPA-212ENST00000478573 ZNF83P51522 516 aa2.47□□□□□ -2.01
CDC42BPA-212ENST00000478573 TAS2R41P59536 307 aa2.47□□□□□ -2.01
CDC42BPA-212ENST00000478573 UBE2NP61088 152 aaKnown RBP2.47□□□□□ -2.01
CDC42BPA-212ENST00000478573 SNRPD2P62316 118 aaKnown RBP2.47□□□□□ -2.01
CDC42BPA-212ENST00000478573 SELENOWP63302 87 aa2.47□□□□□ -2.01
CDC42BPA-212ENST00000478573 HOXC5Q00444 222 aa2.47□□□□□ -2.01
CDC42BPA-212ENST00000478573 PRKCDQ05655 676 aa2.47□□□□□ -2.01
CDC42BPA-212ENST00000478573 LOXL1Q08397 574 aaPredicted RBP2.47□□□□□ -2.01
CDC42BPA-212ENST00000478573 PMS2P3Q13401 168 aa2.47□□□□□ -2.01
CDC42BPA-212ENST00000478573 C1DQ13901 141 aaKnown RBP2.47□□□□□ -2.01
CDC42BPA-212ENST00000478573 HIST3H3Q16695 136 aa2.47□□□□□ -2.01
CDC42BPA-212ENST00000478573 ZNF181Q2M3W8 571 aa2.47□□□□□ -2.01
CDC42BPA-212ENST00000478573 DEFB116Q30KQ4 102 aa2.47□□□□□ -2.01
CDC42BPA-212ENST00000478573 TPTE2P1Q5T6R2 138 aa2.47□□□□□ -2.01
CDC42BPA-212ENST00000478573 SYT6Q5T7P8 510 aaPredicted RBP2.47□□□□□ -2.01
CDC42BPA-212ENST00000478573 C16orf87Q6PH81 154 aa2.47□□□□□ -2.01
CDC42BPA-212ENST00000478573 PLET1Q6UQ28 207 aa2.47□□□□□ -2.01
CDC42BPA-212ENST00000478573 CLVS1Q8IUQ0 354 aaPredicted RBP2.47□□□□□ -2.01
CDC42BPA-212ENST00000478573 C20orf196Q8IYI0 205 aa2.47□□□□□ -2.01
CDC42BPA-212ENST00000478573 C1orf174Q8IYL3 243 aa2.47□□□□□ -2.01
CDC42BPA-212ENST00000478573 C8orf59Q8N0T1 100 aaPredicted RBP2.47□□□□□ -2.01
CDC42BPA-212ENST00000478573 MUC15Q8N387 334 aa2.47□□□□□ -2.01
CDC42BPA-212ENST00000478573 WDR31Q8NA23 367 aa2.47□□□□□ -2.01
CDC42BPA-212ENST00000478573 CHST4Q8NCG5 386 aa2.47□□□□□ -2.01
CDC42BPA-212ENST00000478573 OR10AD1Q8NGE0 317 aa2.47□□□□□ -2.01
CDC42BPA-212ENST00000478573 OR4D11Q8NGI4 311 aa2.47□□□□□ -2.01
CDC42BPA-212ENST00000478573 GRPEL2Q8TAA5 225 aa2.47□□□□□ -2.01
CDC42BPA-212ENST00000478573 TMEM239Q8WW34 195 aa2.47□□□□□ -2.01
CDC42BPA-212ENST00000478573 APH1BQ8WW43 257 aa2.47□□□□□ -2.01
CDC42BPA-212ENST00000478573 CCDC124Q96CT7 223 aaKnown RBP2.47□□□□□ -2.01
CDC42BPA-212ENST00000478573 RCN3Q96D15 328 aa2.47□□□□□ -2.01
CDC42BPA-212ENST00000478573 SGTBQ96EQ0 304 aa2.47□□□□□ -2.01
CDC42BPA-212ENST00000478573 SLC25A44Q96H78 314 aaPredicted RBP2.47□□□□□ -2.01
CDC42BPA-212ENST00000478573 CNBD2Q96M20 576 aa2.47□□□□□ -2.01
CDC42BPA-212ENST00000478573 ZNF75AQ96N20 296 aa2.47□□□□□ -2.01
CDC42BPA-212ENST00000478573 GPX7Q96SL4 187 aaPredicted RBP2.47□□□□□ -2.01
CDC42BPA-212ENST00000478573 RSPO3Q9BXY4 272 aaPredicted RBP2.47□□□□□ -2.01
CDC42BPA-212ENST00000478573 INIPQ9NRY2 104 aa2.47□□□□□ -2.01
CDC42BPA-212ENST00000478573 GLTPQ9NZD2 209 aa2.47□□□□□ -2.01
CDC42BPA-212ENST00000478573 ENOPH1Q9UHY7 261 aa2.47□□□□□ -2.01
CDC42BPA-212ENST00000478573 ATPIF1Q9UII2 106 aa2.47□□□□□ -2.01
CDC42BPA-212ENST00000478573 ENPP5Q9UJA9 477 aa2.47□□□□□ -2.01
CDC42BPA-212ENST00000478573 KLK12Q9UKR0 248 aa2.47□□□□□ -2.01
CDC42BPA-212ENST00000478573 MED31Q9Y3C7 131 aa2.47□□□□□ -2.01
CDC42BPA-212ENST00000478573 CSPG4Q6UVK1 2322 aa2.47□□□□□ -2.01
CDC42BPA-212ENST00000478573 IGLV3-9A0A075B6K5 115 aa2.46□□□□□ -2.02
CDC42BPA-212ENST00000478573 A0A1W2PRG6 482 aa2.46□□□□□ -2.02
CDC42BPA-212ENST00000478573 FAM25AB3EWG3 89 aa2.46□□□□□ -2.02
CDC42BPA-212ENST00000478573 FAM25CB3EWG5 89 aa2.46□□□□□ -2.02
CDC42BPA-212ENST00000478573 FAM25GB3EWG6 89 aa2.46□□□□□ -2.02
CDC42BPA-212ENST00000478573 CXCR6O00574 342 aa2.46□□□□□ -2.02
CDC42BPA-212ENST00000478573 ZNF682O95780 498 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms