RNA–Protein interactions for RNA: ENST00000477558.1

VPS45-207, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,425 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-207ENST00000477558 RELQ04864 619 aaPredicted RBP4.13□□□□□ -1.75
VPS45-207ENST00000477558 MXD1Q05195 221 aa4.13□□□□□ -1.75
VPS45-207ENST00000477558 MADCAM1Q13477 382 aa4.13□□□□□ -1.75
VPS45-207ENST00000477558 SSX2Q16385 188 aa4.13□□□□□ -1.75
VPS45-207ENST00000477558 PNLIPRP3Q17RR3 467 aa4.13□□□□□ -1.75
VPS45-207ENST00000477558 MORN2Q502X0 79 aa4.13□□□□□ -1.75
VPS45-207ENST00000477558 CT45A1Q5HYN5 189 aa4.13□□□□□ -1.75
VPS45-207ENST00000477558 HACD4Q5VWC8 232 aa4.13□□□□□ -1.75
VPS45-207ENST00000477558 C11orf88Q6PI97 169 aa4.13□□□□□ -1.75
VPS45-207ENST00000477558 ZNF833PQ6ZTB9 187 aa4.13□□□□□ -1.75
VPS45-207ENST00000477558 GPR141Q7Z602 305 aa4.13□□□□□ -1.75
VPS45-207ENST00000477558 C5orf24Q7Z6I8 188 aa4.13□□□□□ -1.75
VPS45-207ENST00000477558 TMEM219Q86XT9 240 aa4.13□□□□□ -1.75
VPS45-207ENST00000477558 Q8N6K4 173 aa4.13□□□□□ -1.75
VPS45-207ENST00000477558 CT45A3Q8NHU0 189 aa4.13□□□□□ -1.75
VPS45-207ENST00000477558 RFESDQ8TAC1 157 aa4.13□□□□□ -1.75
VPS45-207ENST00000477558 NDNFQ8TB73 568 aa4.13□□□□□ -1.75
VPS45-207ENST00000477558 NEK7Q8TDX7 302 aa4.13□□□□□ -1.75
VPS45-207ENST00000477558 RAB2BQ8WUD1 216 aa4.13□□□□□ -1.75
VPS45-207ENST00000477558 CCDC107Q8WV48 283 aa4.13□□□□□ -1.75
VPS45-207ENST00000477558 LEAP2Q969E1 77 aa4.13□□□□□ -1.75
VPS45-207ENST00000477558 ARL11Q969Q4 196 aa4.13□□□□□ -1.75
VPS45-207ENST00000477558 SSX3Q99909 188 aa4.13□□□□□ -1.75
VPS45-207ENST00000477558 SRSF8Q9BRL6 282 aaKnown RBP4.13□□□□□ -1.75
VPS45-207ENST00000477558 PARP12Q9H0J9 701 aaKnown RBP4.13□□□□□ -1.75
VPS45-207ENST00000477558 DPAGT1Q9H3H5 408 aa4.13□□□□□ -1.75
VPS45-207ENST00000477558 C16orf95Q9H693 158 aa4.13□□□□□ -1.75
VPS45-207ENST00000477558 PLEKHJ1Q9NW61 149 aa4.13□□□□□ -1.75
VPS45-207ENST00000477558 ELF5Q9UKW6 265 aaPredicted RBP4.13□□□□□ -1.75
VPS45-207ENST00000477558 TRAPPC2LQ9UL33 140 aa4.13□□□□□ -1.75
VPS45-207ENST00000477558 AMMECR1Q9Y4X0 333 aaPredicted RBP4.13□□□□□ -1.75
VPS45-207ENST00000477558 DNAH3Q8TD57 4116 aa4.13□□□□□ -1.75
VPS45-207ENST00000477558 IGKV1D-8A0A087WSZ0 117 aa4.12□□□□□ -1.75
VPS45-207ENST00000477558 TRBV6-7A0A0A0MS04 114 aa4.12□□□□□ -1.75
VPS45-207ENST00000477558 A8MZ25 164 aa4.12□□□□□ -1.75
VPS45-207ENST00000477558 HSD17B6O14756 317 aa4.12□□□□□ -1.75
VPS45-207ENST00000477558 LANCL1O43813 399 aa4.12□□□□□ -1.75
VPS45-207ENST00000477558 TSC22D2O75157 780 aa4.12□□□□□ -1.75
VPS45-207ENST00000477558 APOA1P02647 267 aa4.12□□□□□ -1.75
VPS45-207ENST00000477558 SCTP09683 121 aa4.12□□□□□ -1.75
VPS45-207ENST00000477558 GNB3P16520 340 aa4.12□□□□□ -1.75
VPS45-207ENST00000477558 ANXA7P20073 488 aaKnown RBP4.12□□□□□ -1.75
VPS45-207ENST00000477558 NFYBP25208 207 aa4.12□□□□□ -1.75
VPS45-207ENST00000477558 PPP1CCP36873 323 aaKnown RBP4.12□□□□□ -1.75
VPS45-207ENST00000477558 CEACAM3P40198 252 aa4.12□□□□□ -1.75
VPS45-207ENST00000477558 KIR2DS4P43632 304 aa4.12□□□□□ -1.75
VPS45-207ENST00000477558 SERPINB10P48595 397 aa4.12□□□□□ -1.75
VPS45-207ENST00000477558 RAB7AP51149 207 aa4.12□□□□□ -1.75
VPS45-207ENST00000477558 PRRX1P54821 245 aa4.12□□□□□ -1.75
VPS45-207ENST00000477558 LSM3P62310 102 aaKnown RBP4.12□□□□□ -1.75
VPS45-207ENST00000477558 DIAPH2-AS1Q14236 149 aa4.12□□□□□ -1.75
VPS45-207ENST00000477558 KIR2DS1Q14954 304 aa4.12□□□□□ -1.75
VPS45-207ENST00000477558 SPCS2Q15005 226 aa4.12□□□□□ -1.75
VPS45-207ENST00000477558 CNPY1Q3B7I2 92 aa4.12□□□□□ -1.75
VPS45-207ENST00000477558 UBE2NLQ5JXB2 153 aa4.12□□□□□ -1.75
VPS45-207ENST00000477558 IDNKQ5T6J7 187 aa4.12□□□□□ -1.75
VPS45-207ENST00000477558 FAM122CQ6P4D5 195 aa4.12□□□□□ -1.75
VPS45-207ENST00000477558 OR4A4PQ8NGN8 299 aa4.12□□□□□ -1.75
VPS45-207ENST00000477558 UBALD1Q8TB05 177 aa4.12□□□□□ -1.75
VPS45-207ENST00000477558 DYNC2LI1Q8TCX1 351 aa4.12□□□□□ -1.75
VPS45-207ENST00000477558 RTN4IP1Q8WWV3 396 aaPredicted RBP4.12□□□□□ -1.75
VPS45-207ENST00000477558 ACOT12Q8WYK0 555 aa4.12□□□□□ -1.75
VPS45-207ENST00000477558 GALMQ96C23 342 aa4.12□□□□□ -1.75
VPS45-207ENST00000477558 ISOC1Q96CN7 298 aa4.12□□□□□ -1.75
VPS45-207ENST00000477558 CMSS1Q9BQ75 279 aaKnown RBP4.12□□□□□ -1.75
VPS45-207ENST00000477558 DCSTAMPQ9H295 470 aa4.12□□□□□ -1.75
VPS45-207ENST00000477558 AUNIPQ9H7T9 357 aa4.12□□□□□ -1.75
VPS45-207ENST00000477558 OR2S2Q9NQN1 319 aa4.12□□□□□ -1.75
VPS45-207ENST00000477558 CCDC59Q9P031 241 aaKnown RBP4.12□□□□□ -1.75
VPS45-207ENST00000477558 OR1A1Q9P1Q5 309 aa4.12□□□□□ -1.75
VPS45-207ENST00000477558 TNCP24821 2201 aa4.12□□□□□ -1.75
VPS45-207ENST00000477558 PLXNB1O43157 2135 aa4.12□□□□□ -1.75
VPS45-207ENST00000477558 IGHV4OR15-8A0A075B7B6 117 aa4.12□□□□□ -1.75
VPS45-207ENST00000477558 IGHV3-43A0A0B4J1X8 118 aa4.12□□□□□ -1.75
VPS45-207ENST00000477558 IGHV1-3A0A0C4DH29 117 aa4.12□□□□□ -1.75
VPS45-207ENST00000477558 A0A1B0GUS0 222 aa4.12□□□□□ -1.75
VPS45-207ENST00000477558 TMEM235A6NFC5 223 aa4.12□□□□□ -1.75
VPS45-207ENST00000477558 TRDCB7Z8K6 153 aa4.12□□□□□ -1.75
VPS45-207ENST00000477558 FAM90A26D6RGX4 464 aa4.12□□□□□ -1.75
VPS45-207ENST00000477558 H3BMQ9 156 aa4.12□□□□□ -1.75
VPS45-207ENST00000477558 ZNF701M0R085 212 aaPredicted RBP4.12□□□□□ -1.75
VPS45-207ENST00000477558 FABP7O15540 132 aa4.12□□□□□ -1.75
VPS45-207ENST00000477558 XRCC3O43542 346 aa4.12□□□□□ -1.75
VPS45-207ENST00000477558 HLA-DQB1P01920 261 aa4.12□□□□□ -1.75
VPS45-207ENST00000477558 EIF4EP06730 217 aaKnown RBP4.12□□□□□ -1.75
VPS45-207ENST00000477558 SAA2P0DJI9 122 aaPredicted RBP4.12□□□□□ -1.75
VPS45-207ENST00000477558 IGHV3-43DP0DP04 118 aa4.12□□□□□ -1.75
VPS45-207ENST00000477558 RAG2P55895 527 aa4.12□□□□□ -1.75
VPS45-207ENST00000477558 ERVFC1-1P60608 527 aa4.12□□□□□ -1.75
VPS45-207ENST00000477558 PITPNAQ00169 270 aa4.12□□□□□ -1.75
VPS45-207ENST00000477558 CDNFQ49AH0 187 aa4.12□□□□□ -1.75
VPS45-207ENST00000477558 THOC7Q6I9Y2 204 aaKnown RBP4.12□□□□□ -1.75
VPS45-207ENST00000477558 H1FOOQ8IZA3 346 aaPredicted RBP4.12□□□□□ -1.75
VPS45-207ENST00000477558 LINC01006Q8NI28 216 aa4.12□□□□□ -1.75
VPS45-207ENST00000477558 TOMM40LQ969M1 308 aa4.12□□□□□ -1.75
VPS45-207ENST00000477558 RPEQ96AT9 228 aa4.12□□□□□ -1.75
VPS45-207ENST00000477558 C5orf30Q96GV9 206 aa4.12□□□□□ -1.75
VPS45-207ENST00000477558 SLIRPQ9GZT3 109 aaKnown RBP4.12□□□□□ -1.75
VPS45-207ENST00000477558 NXF2Q9GZY0 626 aaKnown RBP4.12□□□□□ -1.75
VPS45-207ENST00000477558 ATG5Q9H1Y0 275 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms