RNA–Protein interactions for RNA: ENST00000477541.1

HLA-DMA-208, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

Gene HLA-DMA, Length 1,735 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-208ENST00000477541 NDUFB4O95168 129 aa11.31□□□□□ -0.6
HLA-DMA-208ENST00000477541 MT-CO3P00414 261 aa11.31□□□□□ -0.6
HLA-DMA-208ENST00000477541 MT-ND6P03923 174 aa11.31□□□□□ -0.6
HLA-DMA-208ENST00000477541 ADH4P08319 380 aa11.31□□□□□ -0.6
HLA-DMA-208ENST00000477541 CD82P27701 267 aa11.31□□□□□ -0.6
HLA-DMA-208ENST00000477541 TIMP3P35625 211 aa11.31□□□□□ -0.6
HLA-DMA-208ENST00000477541 OR3A1P47881 315 aa11.31□□□□□ -0.6
HLA-DMA-208ENST00000477541 RPL30P62888 115 aaKnown RBP11.31□□□□□ -0.6
HLA-DMA-208ENST00000477541 HTD2P86397 168 aa11.31□□□□□ -0.6
HLA-DMA-208ENST00000477541 Q0VG73 95 aa11.31□□□□□ -0.6
HLA-DMA-208ENST00000477541 ZNF816Q0VGE8 651 aaPredicted RBP11.31□□□□□ -0.6
HLA-DMA-208ENST00000477541 PEAR1Q5VY43 1037 aaPredicted RBP11.31□□□□□ -0.6
HLA-DMA-208ENST00000477541 CST9LP1Q5W188 147 aa11.31□□□□□ -0.6
HLA-DMA-208ENST00000477541 C6orf15Q6UXA7 325 aaPredicted RBP11.31□□□□□ -0.6
HLA-DMA-208ENST00000477541 WDR86Q86TI4 376 aa11.31□□□□□ -0.6
HLA-DMA-208ENST00000477541 MIEN1Q9BRT3 115 aa11.31□□□□□ -0.6
HLA-DMA-208ENST00000477541 OR51B6Q9H340 312 aa11.31□□□□□ -0.6
HLA-DMA-208ENST00000477541 ZDHHC11Q9H8X9 412 aa11.31□□□□□ -0.6
HLA-DMA-208ENST00000477541 ZNF407Q9C0G0 2248 aa11.3□□□□□ -0.6
HLA-DMA-208ENST00000477541 C17orf98A8MV24 154 aa11.3□□□□□ -0.6
HLA-DMA-208ENST00000477541 LAMTOR5O43504 91 aa11.3□□□□□ -0.6
HLA-DMA-208ENST00000477541 GDF9O60383 454 aa11.3□□□□□ -0.6
HLA-DMA-208ENST00000477541 YPEL1O60688 119 aa11.3□□□□□ -0.6
HLA-DMA-208ENST00000477541 MMP23AO75900 390 aa11.3□□□□□ -0.6
HLA-DMA-208ENST00000477541 CER1O95813 267 aa11.3□□□□□ -0.6
HLA-DMA-208ENST00000477541 HBZP02008 142 aa11.3□□□□□ -0.6
HLA-DMA-208ENST00000477541 AREGP15514 252 aa11.3□□□□□ -0.6
HLA-DMA-208ENST00000477541 FOXG1P55316 489 aaPredicted RBP11.3□□□□□ -0.6
HLA-DMA-208ENST00000477541 TGFBR3Q03167 851 aa11.3□□□□□ -0.6
HLA-DMA-208ENST00000477541 YPEL2Q96QA6 119 aa11.3□□□□□ -0.6
HLA-DMA-208ENST00000477541 TBX15Q96SF7 602 aa11.3□□□□□ -0.6
HLA-DMA-208ENST00000477541 FRYQ5TBA9 3013 aa11.3□□□□□ -0.6
HLA-DMA-208ENST00000477541 SPEGQ15772 3267 aa11.29□□□□□ -0.6
HLA-DMA-208ENST00000477541 TRAV39A0A0B4J263 110 aa11.29□□□□□ -0.6
HLA-DMA-208ENST00000477541 MARCH11A6NNE9 402 aa11.29□□□□□ -0.6
HLA-DMA-208ENST00000477541 ZNF705FA8MVS1 300 aaPredicted RBP11.29□□□□□ -0.6
HLA-DMA-208ENST00000477541 FNDC10F2Z333 226 aa11.29□□□□□ -0.6
HLA-DMA-208ENST00000477541 SMPD2O60906 423 aa11.29□□□□□ -0.6
HLA-DMA-208ENST00000477541 HPRT1P00492 218 aa11.29□□□□□ -0.6
HLA-DMA-208ENST00000477541 LINC00614P0C842 121 aa11.29□□□□□ -0.6
HLA-DMA-208ENST00000477541 ZNF705DP0CH99 300 aaPredicted RBP11.29□□□□□ -0.6
HLA-DMA-208ENST00000477541 ZNF705BP0CI00 300 aaPredicted RBP11.29□□□□□ -0.6
HLA-DMA-208ENST00000477541 ADMP35318 185 aa11.29□□□□□ -0.6
HLA-DMA-208ENST00000477541 KIR2DS2P43631 304 aa11.29□□□□□ -0.6
HLA-DMA-208ENST00000477541 ATP5G3P48201 142 aa11.29□□□□□ -0.6
HLA-DMA-208ENST00000477541 SRYQ05066 204 aa11.29□□□□□ -0.6
HLA-DMA-208ENST00000477541 ABHD17BQ5VST6 288 aa11.29□□□□□ -0.6
HLA-DMA-208ENST00000477541 FBXW9Q5XUX1 488 aa11.29□□□□□ -0.6
HLA-DMA-208ENST00000477541 MDP1Q86V88 176 aa11.29□□□□□ -0.6
HLA-DMA-208ENST00000477541 C5orf30Q96GV9 206 aa11.29□□□□□ -0.6
HLA-DMA-208ENST00000477541 UHRF2Q96PU4 802 aa11.29□□□□□ -0.6
HLA-DMA-208ENST00000477541 QTRT1Q9BXR0 403 aaKnown RBP11.29□□□□□ -0.6
HLA-DMA-208ENST00000477541 CBLN4Q9NTU7 201 aa11.29□□□□□ -0.6
HLA-DMA-208ENST00000477541 TRGV10A0A0A0MS01 117 aa11.29□□□□□ -0.6
HLA-DMA-208ENST00000477541 TRGV8A0A0C4DH27 118 aa11.29□□□□□ -0.6
HLA-DMA-208ENST00000477541 RBMXL2O75526 392 aaKnown RBP11.29□□□□□ -0.6
HLA-DMA-208ENST00000477541 C1QTNF9P0C862 333 aa11.29□□□□□ -0.6
HLA-DMA-208ENST00000477541 CRISP2P16562 243 aa11.29□□□□□ -0.6
HLA-DMA-208ENST00000477541 GCH1P30793 250 aa11.29□□□□□ -0.6
HLA-DMA-208ENST00000477541 BRWD1-AS2P59051 145 aa11.29□□□□□ -0.6
HLA-DMA-208ENST00000477541 RELQ04864 619 aaPredicted RBP11.29□□□□□ -0.6
HLA-DMA-208ENST00000477541 CLEC12BQ2HXU8 276 aa11.29□□□□□ -0.6
HLA-DMA-208ENST00000477541 WDR73Q6P4I2 378 aa11.29□□□□□ -0.6
HLA-DMA-208ENST00000477541 CT55Q8WUE5 264 aa11.29□□□□□ -0.6
HLA-DMA-208ENST00000477541 ZDHHC16Q969W1 377 aa11.29□□□□□ -0.6
HLA-DMA-208ENST00000477541 FREM1Q5H8C1 2179 aa11.28□□□□□ -0.6
HLA-DMA-208ENST00000477541 OR10J4P0C629 311 aa11.28□□□□□ -0.6
HLA-DMA-208ENST00000477541 ZNF718Q3SXZ3 478 aa11.28□□□□□ -0.6
HLA-DMA-208ENST00000477541 TMEM256Q8N2U0 113 aa11.28□□□□□ -0.6
HLA-DMA-208ENST00000477541 OR4B1Q8NGF8 309 aa11.28□□□□□ -0.6
HLA-DMA-208ENST00000477541 CORO2AQ92828 525 aa11.28□□□□□ -0.6
HLA-DMA-208ENST00000477541 SFXN3Q9BWM7 321 aa11.28□□□□□ -0.6
HLA-DMA-208ENST00000477541 GNB1LQ9BYB4 327 aa11.28□□□□□ -0.6
HLA-DMA-208ENST00000477541 TTTY12Q9BZ98 90 aa11.28□□□□□ -0.6
HLA-DMA-208ENST00000477541 DCAF16Q9NXF7 216 aa11.28□□□□□ -0.6
HLA-DMA-208ENST00000477541 MED12LQ86YW9 2145 aa11.27□□□□□ -0.6
HLA-DMA-208ENST00000477541 SAA2-SAA4A0A096LPE2 208 aa11.27□□□□□ -0.61
HLA-DMA-208ENST00000477541 DLEU1O43261 78 aa11.27□□□□□ -0.61
HLA-DMA-208ENST00000477541 SPINT2O43291 252 aa11.27□□□□□ -0.61
HLA-DMA-208ENST00000477541 REG1AP05451 166 aa11.27□□□□□ -0.61
HLA-DMA-208ENST00000477541 RHOBP62745 196 aa11.27□□□□□ -0.61
HLA-DMA-208ENST00000477541 ZNF90Q03938 601 aa11.27□□□□□ -0.61
HLA-DMA-208ENST00000477541 TPTE2P1Q5T6R2 138 aa11.27□□□□□ -0.61
HLA-DMA-208ENST00000477541 TREML4Q6UXN2 200 aa11.27□□□□□ -0.61
HLA-DMA-208ENST00000477541 TIPARPQ7Z3E1 657 aaKnown RBP11.27□□□□□ -0.61
HLA-DMA-208ENST00000477541 ZNF808Q8N4W9 903 aaPredicted RBP11.27□□□□□ -0.61
HLA-DMA-208ENST00000477541 OR5AU1Q8NGC0 362 aa11.27□□□□□ -0.61
HLA-DMA-208ENST00000477541 OR52L2PQ8NGH6 319 aa11.27□□□□□ -0.61
HLA-DMA-208ENST00000477541 THOC3Q96J01 351 aaKnown RBP11.27□□□□□ -0.61
HLA-DMA-208ENST00000477541 CNOT1A5YKK6 2376 aaKnown RBP11.27□□□□□ -0.61
HLA-DMA-208ENST00000477541 PRSS46E5RG02 174 aa11.26□□□□□ -0.61
HLA-DMA-208ENST00000477541 CRYAAP02489 173 aa11.26□□□□□ -0.61
HLA-DMA-208ENST00000477541 ARL14EPLP0DKL9 152 aa11.26□□□□□ -0.61
HLA-DMA-208ENST00000477541 LGALS4P56470 323 aa11.26□□□□□ -0.61
HLA-DMA-208ENST00000477541 ERVK-16P61578 105 aa11.26□□□□□ -0.61
HLA-DMA-208ENST00000477541 TLE1Q04724 770 aa11.26□□□□□ -0.61
HLA-DMA-208ENST00000477541 MZT1Q08AG7 82 aa11.26□□□□□ -0.61
HLA-DMA-208ENST00000477541 RAB31Q13636 194 aa11.26□□□□□ -0.61
HLA-DMA-208ENST00000477541 OR10J3Q5JRS4 329 aa11.26□□□□□ -0.61
HLA-DMA-208ENST00000477541 SPATA46Q5T0L3 261 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms