RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 SEC22CQ9BRL7 303 aa12.93□□□□□ -0.34
VHL-203ENST00000477538 ESM1Q9NQ30 184 aa12.93□□□□□ -0.34
VHL-203ENST00000477538 NBR2O15453 112 aa12.92□□□□□ -0.34
VHL-203ENST00000477538 PRAF2O60831 178 aa12.92□□□□□ -0.34
VHL-203ENST00000477538 CDS2O95674 445 aa12.92□□□□□ -0.34
VHL-203ENST00000477538 HRASP01112 189 aa12.92□□□□□ -0.34
VHL-203ENST00000477538 IGKV1-39P01597 117 aa12.92□□□□□ -0.34
VHL-203ENST00000477538 IGKV1D-39P04432 117 aa12.92□□□□□ -0.34
VHL-203ENST00000477538 IL5P05113 134 aa12.92□□□□□ -0.34
VHL-203ENST00000477538 F2RL1P55085 397 aa12.92□□□□□ -0.34
VHL-203ENST00000477538 SRPXP78539 464 aa12.92□□□□□ -0.34
VHL-203ENST00000477538 ANKRD55Q3KP44 614 aa12.92□□□□□ -0.34
VHL-203ENST00000477538 LIAT1Q6ZQX7 453 aa12.92□□□□□ -0.34
VHL-203ENST00000477538 C16orf82Q7Z2V1 217 aa12.92□□□□□ -0.34
VHL-203ENST00000477538 OR8H1Q8NGG4 311 aa12.92□□□□□ -0.34
VHL-203ENST00000477538 LHFPL5Q8TAF8 219 aa12.92□□□□□ -0.34
VHL-203ENST00000477538 R3HDM4Q96D70 268 aa12.92□□□□□ -0.34
VHL-203ENST00000477538 CHIAQ9BZP6 476 aa12.92□□□□□ -0.34
VHL-203ENST00000477538 C1RLQ9NZP8 487 aa12.92□□□□□ -0.34
VHL-203ENST00000477538 KIAA1456Q9P272 454 aa12.92□□□□□ -0.34
VHL-203ENST00000477538 MOB4Q9Y3A3 225 aa12.92□□□□□ -0.34
VHL-203ENST00000477538 A0A0A6YYJ9 748 aa12.91□□□□□ -0.34
VHL-203ENST00000477538 NCBP2LA6PVI3 153 aaKnown RBP12.91□□□□□ -0.34
VHL-203ENST00000477538 SRRM4A7MD48 611 aaKnown RBP12.91□□□□□ -0.34
VHL-203ENST00000477538 SLC25A17O43808 307 aa12.91□□□□□ -0.34
VHL-203ENST00000477538 CHST1O43916 411 aa12.91□□□□□ -0.34
VHL-203ENST00000477538 NDUFA3O95167 84 aa12.91□□□□□ -0.34
VHL-203ENST00000477538 SPDEFO95238 335 aa12.91□□□□□ -0.34
VHL-203ENST00000477538 DUS4LO95620 317 aaKnown RBP12.91□□□□□ -0.34
VHL-203ENST00000477538 IGLV2-23P01705 113 aa12.91□□□□□ -0.34
VHL-203ENST00000477538 NQO2P16083 231 aa12.91□□□□□ -0.34
VHL-203ENST00000477538 ERVK-16P61578 105 aa12.91□□□□□ -0.34
VHL-203ENST00000477538 PSG5Q15238 335 aa12.91□□□□□ -0.34
VHL-203ENST00000477538 VMA21Q3ZAQ7 101 aa12.91□□□□□ -0.34
VHL-203ENST00000477538 TMEM268Q5VZI3 342 aa12.91□□□□□ -0.34
VHL-203ENST00000477538 SSX9Q7RTT3 188 aa12.91□□□□□ -0.34
VHL-203ENST00000477538 ZNF695Q8IW36 515 aa12.91□□□□□ -0.34
VHL-203ENST00000477538 SELENOHQ8IZQ5 122 aaKnown RBP12.91□□□□□ -0.34
VHL-203ENST00000477538 VKORC1L1Q8N0U8 176 aa12.91□□□□□ -0.34
VHL-203ENST00000477538 LGI3Q8N145 548 aa12.91□□□□□ -0.34
VHL-203ENST00000477538 DMBX1Q8NFW5 382 aa12.91□□□□□ -0.34
VHL-203ENST00000477538 NPBQ8NG41 125 aa12.91□□□□□ -0.34
VHL-203ENST00000477538 ZNF431Q8TF32 576 aaPredicted RBP12.91□□□□□ -0.34
VHL-203ENST00000477538 RBPMSQ93062 196 aaKnown RBP12.91□□□□□ -0.34
VHL-203ENST00000477538 RHOVQ96L33 236 aa12.91□□□□□ -0.34
VHL-203ENST00000477538 TMEM56Q96MV1 263 aa12.91□□□□□ -0.34
VHL-203ENST00000477538 AIFM2Q9BRQ8 373 aa12.91□□□□□ -0.34
VHL-203ENST00000477538 GPN1Q9HCN4 374 aaPredicted RBP12.91□□□□□ -0.34
VHL-203ENST00000477538 PLSCR3Q9NRY6 295 aa12.91□□□□□ -0.34
VHL-203ENST00000477538 TMEM56-RWDD3S4R434 201 aa12.91□□□□□ -0.34
VHL-203ENST00000477538 MARCH11A6NNE9 402 aa12.9□□□□□ -0.34
VHL-203ENST00000477538 CLDN34H7C241 214 aa12.9□□□□□ -0.34
VHL-203ENST00000477538 RRHO14718 337 aa12.9□□□□□ -0.34
VHL-203ENST00000477538 TCF21O43680 179 aa12.9□□□□□ -0.34
VHL-203ENST00000477538 ATG12O94817 140 aa12.9□□□□□ -0.34
VHL-203ENST00000477538 KRASP01116 189 aa12.9□□□□□ -0.34
VHL-203ENST00000477538 SAA1P0DJI8 122 aaPredicted RBP12.9□□□□□ -0.34
VHL-203ENST00000477538 G6PCP35575 357 aa12.9□□□□□ -0.34
VHL-203ENST00000477538 AKR1C2P52895 323 aa12.9□□□□□ -0.34
VHL-203ENST00000477538 POU2AF1Q16633 256 aa12.9□□□□□ -0.34
VHL-203ENST00000477538 COQ8AQ8NI60 647 aa12.9□□□□□ -0.34
VHL-203ENST00000477538 IL22RA2Q969J5 263 aa12.9□□□□□ -0.34
VHL-203ENST00000477538 SEC22AQ96IW7 307 aa12.9□□□□□ -0.34
VHL-203ENST00000477538 FBXL15Q9H469 300 aa12.9□□□□□ -0.34
VHL-203ENST00000477538 RAB18Q9NP72 206 aa12.9□□□□□ -0.34
VHL-203ENST00000477538 A0A0B4J293 547 aa12.89□□□□□ -0.35
VHL-203ENST00000477538 M0QZK8 103 aa12.89□□□□□ -0.35
VHL-203ENST00000477538 FGF16O43320 207 aa12.89□□□□□ -0.35
VHL-203ENST00000477538 GPR137BO60478 399 aa12.89□□□□□ -0.35
VHL-203ENST00000477538 UBE2KP61086 200 aa12.89□□□□□ -0.35
VHL-203ENST00000477538 UBA52P62987 128 aaKnown RBP12.89□□□□□ -0.35
VHL-203ENST00000477538 PLGLAQ15195 96 aa12.89□□□□□ -0.35
VHL-203ENST00000477538 TATDN3Q17R31 274 aa12.89□□□□□ -0.35
VHL-203ENST00000477538 OR4A47Q6IF82 309 aa12.89□□□□□ -0.35
VHL-203ENST00000477538 LIN54Q6MZP7 749 aa12.89□□□□□ -0.35
VHL-203ENST00000477538 FAM71E2Q8N5Q1 922 aa12.89□□□□□ -0.35
VHL-203ENST00000477538 SLC35G3Q8N808 338 aa12.89□□□□□ -0.35
VHL-203ENST00000477538 LRTM2Q8N967 370 aa12.89□□□□□ -0.35
VHL-203ENST00000477538 Q8N9W7 124 aa12.89□□□□□ -0.35
VHL-203ENST00000477538 RNASE11Q8TAA1 199 aaKnown RBP12.89□□□□□ -0.35
VHL-203ENST00000477538 VSTM2AQ8TAG5 236 aa12.89□□□□□ -0.35
VHL-203ENST00000477538 MITD1Q8WV92 249 aa12.89□□□□□ -0.35
VHL-203ENST00000477538 PHB2Q99623 299 aa12.89□□□□□ -0.35
VHL-203ENST00000477538 TMEM140Q9NV12 185 aa12.89□□□□□ -0.35
VHL-203ENST00000477538 METTL1Q9UBP6 276 aaKnown RBP12.89□□□□□ -0.35
VHL-203ENST00000477538 NIPBLQ6KC79 2804 aaeCLIP12.88□□□□□ -0.358e-7■■■□□ 15.3
VHL-203ENST00000477538 A0A0B4J2A0 478 aa12.88□□□□□ -0.35
VHL-203ENST00000477538 PIGBOS1A0A0B4J2F0 54 aa12.88□□□□□ -0.35
VHL-203ENST00000477538 SNRPGP15A8MWD9 76 aa12.88□□□□□ -0.35
VHL-203ENST00000477538 CREBL2O60519 120 aaPredicted RBP12.88□□□□□ -0.35
VHL-203ENST00000477538 OR2A4O95047 310 aa12.88□□□□□ -0.35
VHL-203ENST00000477538 IGKV1-5P01602 117 aa12.88□□□□□ -0.35
VHL-203ENST00000477538 CRYGBP07316 175 aa12.88□□□□□ -0.35
VHL-203ENST00000477538 RNASE1P07998 156 aaKnown RBP12.88□□□□□ -0.35
VHL-203ENST00000477538 C5orf64Q2M2E5 130 aa12.88□□□□□ -0.35
VHL-203ENST00000477538 H2BFWTQ7Z2G1 175 aa12.88□□□□□ -0.35
VHL-203ENST00000477538 PUSL1Q8N0Z8 303 aaKnown RBP12.88□□□□□ -0.35
VHL-203ENST00000477538 C5orf56Q8N8D9 126 aa12.88□□□□□ -0.35
VHL-203ENST00000477538 TEX45Q8NA69 505 aa12.88□□□□□ -0.35
VHL-203ENST00000477538 OR2A7Q96R45 310 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms