RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 TRAV3A0A0B4J244 114 aa12.53□□□□□ -0.4
COPS3-207ENST00000477299 M0QZK8 103 aa12.53□□□□□ -0.4
COPS3-207ENST00000477299 IGKV1-39P01597 117 aa12.53□□□□□ -0.4
COPS3-207ENST00000477299 IGHG2P01859 326 aa12.53□□□□□ -0.4
COPS3-207ENST00000477299 IGKV1D-39P04432 117 aa12.53□□□□□ -0.4
COPS3-207ENST00000477299 MYOD1P15172 320 aa12.53□□□□□ -0.4
COPS3-207ENST00000477299 FAUP35544 74 aaKnown RBP12.53□□□□□ -0.4
COPS3-207ENST00000477299 LGALS7P47929 136 aa12.53□□□□□ -0.4
COPS3-207ENST00000477299 PROK1P58294 105 aa12.53□□□□□ -0.4
COPS3-207ENST00000477299 RND3P61587 244 aa12.53□□□□□ -0.4
COPS3-207ENST00000477299 FOXL1Q12952 345 aa12.53□□□□□ -0.4
COPS3-207ENST00000477299 CATR1Q13166 79 aa12.53□□□□□ -0.4
COPS3-207ENST00000477299 LIN54Q6MZP7 749 aa12.53□□□□□ -0.4
COPS3-207ENST00000477299 OR4S2Q8NH73 311 aa12.53□□□□□ -0.4
COPS3-207ENST00000477299 OR2T6Q8NHC8 308 aa12.53□□□□□ -0.4
COPS3-207ENST00000477299 TSNAXQ99598 290 aaKnown RBP12.53□□□□□ -0.4
COPS3-207ENST00000477299 BEX1Q9HBH7 125 aa12.53□□□□□ -0.4
COPS3-207ENST00000477299 PRR13Q9NZ81 148 aa12.53□□□□□ -0.4
COPS3-207ENST00000477299 KIAA1456Q9P272 454 aa12.53□□□□□ -0.4
COPS3-207ENST00000477299 FLVCR2Q9UPI3 526 aa12.53□□□□□ -0.4
COPS3-207ENST00000477299 ARPC1BO15143 372 aaKnown RBP12.52□□□□□ -0.41
COPS3-207ENST00000477299 SAA1P0DJI8 122 aaPredicted RBP12.52□□□□□ -0.41
COPS3-207ENST00000477299 VDAC2P45880 294 aaPredicted RBP12.52□□□□□ -0.41
COPS3-207ENST00000477299 COMPP49747 757 aaPredicted RBP12.52□□□□□ -0.41
COPS3-207ENST00000477299 PLGLAQ15195 96 aa12.52□□□□□ -0.41
COPS3-207ENST00000477299 ARSJQ5FYB0 599 aaPredicted RBP12.52□□□□□ -0.41
COPS3-207ENST00000477299 SLC35E3Q7Z769 313 aa12.52□□□□□ -0.41
COPS3-207ENST00000477299 OSR1Q8TAX0 266 aaPredicted RBP12.52□□□□□ -0.41
COPS3-207ENST00000477299 BORCS5Q969J3 196 aa12.52□□□□□ -0.41
COPS3-207ENST00000477299 ZNF486Q96H40 463 aaPredicted RBP12.52□□□□□ -0.41
COPS3-207ENST00000477299 COPZ2Q9P299 210 aa12.52□□□□□ -0.41
COPS3-207ENST00000477299 MMP24Q9Y5R2 645 aa12.52□□□□□ -0.41
COPS3-207ENST00000477299 FBN3Q75N90 2809 aa12.52□□□□□ -0.41
COPS3-207ENST00000477299 RBFOX2O43251 390 aaKnown RBP eCLIP12.51□□□□□ -0.41
COPS3-207ENST00000477299 LYRM1O43325 122 aa12.51□□□□□ -0.41
COPS3-207ENST00000477299 UPK1BO75841 260 aa12.51□□□□□ -0.41
COPS3-207ENST00000477299 CA2P00918 260 aa12.51□□□□□ -0.41
COPS3-207ENST00000477299 HLA-DRB1P01911 266 aa12.51□□□□□ -0.41
COPS3-207ENST00000477299 EGR2P11161 476 aaPredicted RBP12.51□□□□□ -0.41
COPS3-207ENST00000477299 AKR1C4P17516 323 aa12.51□□□□□ -0.41
COPS3-207ENST00000477299 KIR2DS2P43631 304 aa12.51□□□□□ -0.41
COPS3-207ENST00000477299 UBE2KP61086 200 aa12.51□□□□□ -0.41
COPS3-207ENST00000477299 CX3CL1P78423 397 aa12.51□□□□□ -0.41
COPS3-207ENST00000477299 CBX3Q13185 183 aa12.51□□□□□ -0.41
COPS3-207ENST00000477299 SURF2Q15527 256 aaPredicted RBP12.51□□□□□ -0.41
COPS3-207ENST00000477299 PUSL1Q8N0Z8 303 aaKnown RBP12.51□□□□□ -0.41
COPS3-207ENST00000477299 KLHDC1Q8N7A1 406 aa12.51□□□□□ -0.41
COPS3-207ENST00000477299 C11orf44Q8N8P7 122 aa12.51□□□□□ -0.41
COPS3-207ENST00000477299 RHOVQ96L33 236 aa12.51□□□□□ -0.41
COPS3-207ENST00000477299 FAM103A1Q9BTL3 118 aaKnown RBP12.51□□□□□ -0.41
COPS3-207ENST00000477299 WNT10AQ9GZT5 417 aa12.51□□□□□ -0.41
COPS3-207ENST00000477299 C14orf166Q9Y224 244 aaKnown RBP12.51□□□□□ -0.41
COPS3-207ENST00000477299 C3orf85A0A1B0GTC6 90 aa12.5□□□□□ -0.41
COPS3-207ENST00000477299 NAP1L6A6NFF2 107 aa12.5□□□□□ -0.41
COPS3-207ENST00000477299 G3V318 75 aa12.5□□□□□ -0.41
COPS3-207ENST00000477299 ATP6V0E1O15342 81 aa12.5□□□□□ -0.41
COPS3-207ENST00000477299 HPRT1P00492 218 aa12.5□□□□□ -0.41
COPS3-207ENST00000477299 OR5AC1P0C628 307 aa12.5□□□□□ -0.41
COPS3-207ENST00000477299 G6PCP35575 357 aa12.5□□□□□ -0.41
COPS3-207ENST00000477299 GNB1P62873 340 aa12.5□□□□□ -0.41
COPS3-207ENST00000477299 SUPT4H1P63272 117 aaKnown RBP12.5□□□□□ -0.41
COPS3-207ENST00000477299 IZUMO4Q1ZYL8 232 aa12.5□□□□□ -0.41
COPS3-207ENST00000477299 OR4A47Q6IF82 309 aa12.5□□□□□ -0.41
COPS3-207ENST00000477299 TMED4Q7Z7H5 227 aa12.5□□□□□ -0.41
COPS3-207ENST00000477299 ZNF329Q86UD4 541 aa12.5□□□□□ -0.41
COPS3-207ENST00000477299 PPP1R27Q86WC6 154 aa12.5□□□□□ -0.41
COPS3-207ENST00000477299 LHFPL5Q8TAF8 219 aa12.5□□□□□ -0.41
COPS3-207ENST00000477299 WIPF2Q8TF74 440 aaPredicted RBP12.5□□□□□ -0.41
COPS3-207ENST00000477299 R3HDM4Q96D70 268 aa12.5□□□□□ -0.41
COPS3-207ENST00000477299 OR51J1Q9H342 316 aa12.5□□□□□ -0.41
COPS3-207ENST00000477299 NAA60Q9H7X0 242 aa12.5□□□□□ -0.41
COPS3-207ENST00000477299 ZNF430Q9H8G1 570 aaPredicted RBP12.5□□□□□ -0.41
COPS3-207ENST00000477299 WSB1Q9Y6I7 421 aa12.5□□□□□ -0.41
COPS3-207ENST00000477299 CRYM-AS1A6NIL9 109 aa12.49□□□□□ -0.41
COPS3-207ENST00000477299 E7EUB6 86 aa12.49□□□□□ -0.41
COPS3-207ENST00000477299 NDUFB6O95139 128 aa12.49□□□□□ -0.41
COPS3-207ENST00000477299 SPDEFO95238 335 aa12.49□□□□□ -0.41
COPS3-207ENST00000477299 KRASP01116 189 aa12.49□□□□□ -0.41
COPS3-207ENST00000477299 IL6RP08887 468 aaPredicted RBP12.49□□□□□ -0.41
COPS3-207ENST00000477299 PRSS8Q16651 343 aa12.49□□□□□ -0.41
COPS3-207ENST00000477299 VMA21Q3ZAQ7 101 aa12.49□□□□□ -0.41
COPS3-207ENST00000477299 C10orf55Q5SWW7 151 aa12.49□□□□□ -0.41
COPS3-207ENST00000477299 C12orf54Q6X4T0 127 aa12.49□□□□□ -0.41
COPS3-207ENST00000477299 CCDC71LQ8N9Z2 235 aa12.49□□□□□ -0.41
COPS3-207ENST00000477299 TEX45Q8NA69 505 aa12.49□□□□□ -0.41
COPS3-207ENST00000477299 POC5Q8NA72 575 aa12.49□□□□□ -0.41
COPS3-207ENST00000477299 GLYATL2Q8WU03 294 aa12.49□□□□□ -0.41
COPS3-207ENST00000477299 WFDC12Q8WWY7 111 aa12.49□□□□□ -0.41
COPS3-207ENST00000477299 DEDD2Q8WXF8 326 aa12.49□□□□□ -0.41
COPS3-207ENST00000477299 C7orf50Q9BRJ6 194 aaKnown RBP12.49□□□□□ -0.41
COPS3-207ENST00000477299 PLEKHA2Q9HB19 425 aa12.49□□□□□ -0.41
COPS3-207ENST00000477299 PARP11Q9NR21 331 aa12.49□□□□□ -0.41
COPS3-207ENST00000477299 TEX13DA0A0J9YY54 714 aaPredicted RBP12.48□□□□□ -0.41
COPS3-207ENST00000477299 CENPXA8MT69 81 aa12.48□□□□□ -0.41
COPS3-207ENST00000477299 H0Y980 276 aa12.48□□□□□ -0.41
COPS3-207ENST00000477299 OR2A4O95047 310 aa12.48□□□□□ -0.41
COPS3-207ENST00000477299 HRASP01112 189 aa12.48□□□□□ -0.41
COPS3-207ENST00000477299 OR9G9P0C7N8 305 aa12.48□□□□□ -0.41
COPS3-207ENST00000477299 APELAP0DMC3 54 aa12.48□□□□□ -0.41
COPS3-207ENST00000477299 CD28P10747 220 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms