RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 FCGR3AP08637 254 aa8.9□□□□□ -0.98
HDAC6-219ENST00000476625 AREGP15514 252 aa8.9□□□□□ -0.98
HDAC6-219ENST00000476625 MAPK3P27361 379 aaPredicted RBP8.9□□□□□ -0.98
HDAC6-219ENST00000476625 DUTP33316 252 aaKnown RBP8.9□□□□□ -0.98
HDAC6-219ENST00000476625 UBE2KP61086 200 aa8.9□□□□□ -0.98
HDAC6-219ENST00000476625 RPL30P62888 115 aaKnown RBP8.9□□□□□ -0.98
HDAC6-219ENST00000476625 HSD17B12Q53GQ0 312 aa8.9□□□□□ -0.98
HDAC6-219ENST00000476625 UXS1Q8NBZ7 420 aa8.9□□□□□ -0.98
HDAC6-219ENST00000476625 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.9□□□□□ -0.98
HDAC6-219ENST00000476625 BPIFB6Q8NFQ5 453 aa8.9□□□□□ -0.98
HDAC6-219ENST00000476625 OR6M1Q8NGM8 313 aa8.9□□□□□ -0.98
HDAC6-219ENST00000476625 GPHA2Q96T91 129 aa8.9□□□□□ -0.98
HDAC6-219ENST00000476625 PLGRKTQ9HBL7 147 aa8.9□□□□□ -0.98
HDAC6-219ENST00000476625 FBXL7Q9UJT9 491 aa8.9□□□□□ -0.98
HDAC6-219ENST00000476625 A0A075B6Q4 140 aa8.89□□□□□ -0.99
HDAC6-219ENST00000476625 RAB27BO00194 218 aa8.89□□□□□ -0.99
HDAC6-219ENST00000476625 GGCTO75223 188 aaKnown RBP8.89□□□□□ -0.99
HDAC6-219ENST00000476625 CD1AP06126 327 aa8.89□□□□□ -0.99
HDAC6-219ENST00000476625 IL6RP08887 468 aaPredicted RBP8.89□□□□□ -0.99
HDAC6-219ENST00000476625 CD37P11049 281 aa8.89□□□□□ -0.99
HDAC6-219ENST00000476625 ARL3P36405 182 aa8.89□□□□□ -0.99
HDAC6-219ENST00000476625 RPS25P62851 125 aaKnown RBP8.89□□□□□ -0.99
HDAC6-219ENST00000476625 MED21Q13503 144 aa8.89□□□□□ -0.99
HDAC6-219ENST00000476625 RTL8BQ17RB0 113 aa8.89□□□□□ -0.99
HDAC6-219ENST00000476625 VMA21Q3ZAQ7 101 aa8.89□□□□□ -0.99
HDAC6-219ENST00000476625 HES5Q5TA89 166 aa8.89□□□□□ -0.99
HDAC6-219ENST00000476625 ZNF57Q68EA5 555 aaPredicted RBP8.89□□□□□ -0.99
HDAC6-219ENST00000476625 TMEM91Q6ZNR0 172 aa8.89□□□□□ -0.99
HDAC6-219ENST00000476625 SLC16A13Q7RTY0 426 aa8.89□□□□□ -0.99
HDAC6-219ENST00000476625 TTC9CQ8N5M4 171 aa8.89□□□□□ -0.99
HDAC6-219ENST00000476625 TEX45Q8NA69 505 aa8.89□□□□□ -0.99
HDAC6-219ENST00000476625 KCTD12Q96CX2 325 aaKnown RBP8.89□□□□□ -0.99
HDAC6-219ENST00000476625 FANCD2OSQ96PS1 177 aa8.89□□□□□ -0.99
HDAC6-219ENST00000476625 FYTTD1Q96QD9 318 aaKnown RBP8.89□□□□□ -0.99
HDAC6-219ENST00000476625 URM1Q9BTM9 101 aaKnown RBP8.89□□□□□ -0.99
HDAC6-219ENST00000476625 CABLES2Q9BTV7 478 aa8.89□□□□□ -0.99
HDAC6-219ENST00000476625 RIMS4Q9H426 269 aaPredicted RBP8.89□□□□□ -0.99
HDAC6-219ENST00000476625 HSF4Q9ULV5 492 aa8.89□□□□□ -0.99
HDAC6-219ENST00000476625 LSM2Q9Y333 95 aaKnown RBP8.89□□□□□ -0.99
HDAC6-219ENST00000476625 TRBV6-7A0A0A0MS04 114 aa8.88□□□□□ -0.99
HDAC6-219ENST00000476625 TMEM272A0A1B0GTI8 110 aa8.88□□□□□ -0.99
HDAC6-219ENST00000476625 MFSD2BA6NFX1 497 aa8.88□□□□□ -0.99
HDAC6-219ENST00000476625 LGALS9O00182 355 aa8.88□□□□□ -0.99
HDAC6-219ENST00000476625 SPRY2O43597 315 aa8.88□□□□□ -0.99
HDAC6-219ENST00000476625 FCGR3BO75015 233 aa8.88□□□□□ -0.99
HDAC6-219ENST00000476625 UCHL1P09936 223 aa8.88□□□□□ -0.99
HDAC6-219ENST00000476625 GNB3P16520 340 aa8.88□□□□□ -0.99
HDAC6-219ENST00000476625 RPL35AP18077 110 aaKnown RBP8.88□□□□□ -0.99
HDAC6-219ENST00000476625 FCGR2BP31994 310 aaPredicted RBP8.88□□□□□ -0.99
HDAC6-219ENST00000476625 CDK10Q15131 360 aa8.88□□□□□ -0.99
HDAC6-219ENST00000476625 ZNF124Q15973 351 aa8.88□□□□□ -0.99
HDAC6-219ENST00000476625 NECAP1Q8NC96 275 aa8.88□□□□□ -0.99
HDAC6-219ENST00000476625 OR4A4PQ8NGN8 299 aa8.88□□□□□ -0.99
HDAC6-219ENST00000476625 PHYHIPQ92561 330 aa8.88□□□□□ -0.99
HDAC6-219ENST00000476625 THRSPQ92748 146 aa8.88□□□□□ -0.99
HDAC6-219ENST00000476625 DCUN1D5Q9BTE7 237 aa8.88□□□□□ -0.99
HDAC6-219ENST00000476625 FKBP14Q9NWM8 211 aa8.88□□□□□ -0.99
HDAC6-219ENST00000476625 TECRQ9NZ01 308 aaKnown RBP8.88□□□□□ -0.99
HDAC6-219ENST00000476625 RBM7Q9Y580 266 aaKnown RBP8.88□□□□□ -0.99
HDAC6-219ENST00000476625 IGHV3OR16-8A0A075B7F1 116 aa8.87□□□□□ -0.99
HDAC6-219ENST00000476625 CGB1A6NKQ9 187 aa8.87□□□□□ -0.99
HDAC6-219ENST00000476625 SLC17A2O00624 439 aa8.87□□□□□ -0.99
HDAC6-219ENST00000476625 CBX3Q13185 183 aa8.87□□□□□ -0.99
HDAC6-219ENST00000476625 RAB11BQ15907 218 aa8.87□□□□□ -0.99
HDAC6-219ENST00000476625 C2orf76Q3KRA6 126 aa8.87□□□□□ -0.99
HDAC6-219ENST00000476625 LIPKQ5VXJ0 399 aa8.87□□□□□ -0.99
HDAC6-219ENST00000476625 OR10J5Q8NHC4 309 aa8.87□□□□□ -0.99
HDAC6-219ENST00000476625 MGAT4AQ9UM21 535 aa8.87□□□□□ -0.99
HDAC6-219ENST00000476625 DNAH6Q9C0G6 4158 aa8.87□□□□□ -0.99
HDAC6-219ENST00000476625 IGLV2-14P01704 120 aa8.86□□□□□ -0.99
HDAC6-219ENST00000476625 RPA2P15927 270 aa8.86□□□□□ -0.99
HDAC6-219ENST00000476625 BRWD1-AS2P59051 145 aa8.86□□□□□ -0.99
HDAC6-219ENST00000476625 ZNF585BQ52M93 769 aa8.86□□□□□ -0.99
HDAC6-219ENST00000476625 GPHB5Q86YW7 130 aa8.86□□□□□ -0.99
HDAC6-219ENST00000476625 H1FOOQ8IZA3 346 aaPredicted RBP8.86□□□□□ -0.99
HDAC6-219ENST00000476625 DHRSXQ8N5I4 330 aa8.86□□□□□ -0.99
HDAC6-219ENST00000476625 FBLIM1Q8WUP2 373 aa8.86□□□□□ -0.99
HDAC6-219ENST00000476625 PHLDA1Q8WV24 401 aaPredicted RBP8.86□□□□□ -0.99
HDAC6-219ENST00000476625 IGKV1D-13A0A0B4J2D9 117 aa8.85□□□□□ -0.99
HDAC6-219ENST00000476625 A8MWP6 167 aa8.85□□□□□ -0.99
HDAC6-219ENST00000476625 MFNGO00587 321 aa8.85□□□□□ -0.99
HDAC6-219ENST00000476625 DENRO43583 198 aaKnown RBP8.85□□□□□ -0.99
HDAC6-219ENST00000476625 CDK1P06493 297 aa8.85□□□□□ -0.99
HDAC6-219ENST00000476625 IGKV1-13P0DP09 117 aa8.85□□□□□ -0.99
HDAC6-219ENST00000476625 CTRB1P17538 263 aa8.85□□□□□ -0.99
HDAC6-219ENST00000476625 NFYAP23511 347 aaPredicted RBP8.85□□□□□ -0.99
HDAC6-219ENST00000476625 GPR183P32249 361 aa8.85□□□□□ -0.99
HDAC6-219ENST00000476625 SERPINB10P48595 397 aa8.85□□□□□ -0.99
HDAC6-219ENST00000476625 OR10A3P58181 314 aa8.85□□□□□ -0.99
HDAC6-219ENST00000476625 NANOS2P60321 138 aaKnown RBP8.85□□□□□ -0.99
HDAC6-219ENST00000476625 MED22Q15528 200 aa8.85□□□□□ -0.99
HDAC6-219ENST00000476625 ODF3L2Q3SX64 289 aa8.85□□□□□ -0.99
HDAC6-219ENST00000476625 TTC23Q5W5X9 447 aa8.85□□□□□ -0.99
HDAC6-219ENST00000476625 CTRB2Q6GPI1 263 aa8.85□□□□□ -0.99
HDAC6-219ENST00000476625 SSX9Q7RTT3 188 aa8.85□□□□□ -0.99
HDAC6-219ENST00000476625 WFDC3Q8IUB2 231 aa8.85□□□□□ -0.99
HDAC6-219ENST00000476625 MMD2Q8IY49 270 aa8.85□□□□□ -0.99
HDAC6-219ENST00000476625 C8orf59Q8N0T1 100 aaPredicted RBP8.85□□□□□ -0.99
HDAC6-219ENST00000476625 MS4A15Q8N5U1 240 aa8.85□□□□□ -0.99
HDAC6-219ENST00000476625 OR1L6Q8NGR2 347 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms