RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 GID4Q8IVV7 300 aa2.38□□□□□ -2.03
VPS50-212ENST00000476413 ZNF283Q8N7M2 679 aa2.38□□□□□ -2.03
VPS50-212ENST00000476413 C12orf43Q96C57 262 aaKnown RBP2.38□□□□□ -2.03
VPS50-212ENST00000476413 TXNDC17Q9BRA2 123 aa2.38□□□□□ -2.03
VPS50-212ENST00000476413 OR51I1Q9H343 314 aa2.38□□□□□ -2.03
VPS50-212ENST00000476413 OR51I2Q9H344 312 aa2.38□□□□□ -2.03
VPS50-212ENST00000476413 TMEM106BQ9NUM4 274 aa2.38□□□□□ -2.03
VPS50-212ENST00000476413 NCKAP5O14513 1909 aa2.38□□□□□ -2.03
VPS50-212ENST00000476413 EVC2Q86UK5 1308 aa2.38□□□□□ -2.03
VPS50-212ENST00000476413 KRT75O95678 551 aa2.37□□□□□ -2.03
VPS50-212ENST00000476413 NPYP01303 97 aa2.37□□□□□ -2.03
VPS50-212ENST00000476413 MYL12AP19105 171 aa2.37□□□□□ -2.03
VPS50-212ENST00000476413 MAP2K4P45985 399 aa2.37□□□□□ -2.03
VPS50-212ENST00000476413 NKX2-5P52952 324 aaPredicted RBP2.37□□□□□ -2.03
VPS50-212ENST00000476413 EMX1Q04741 257 aaPredicted RBP2.37□□□□□ -2.03
VPS50-212ENST00000476413 PRDX4Q13162 271 aa2.37□□□□□ -2.03
VPS50-212ENST00000476413 CXorf21Q9HAI6 301 aa2.37□□□□□ -2.03
VPS50-212ENST00000476413 DISC1C4P0D8 188 aa2.36□□□□□ -2.03
VPS50-212ENST00000476413 S1PR2O95136 353 aa2.36□□□□□ -2.03
VPS50-212ENST00000476413 IFNA5P01569 189 aa2.36□□□□□ -2.03
VPS50-212ENST00000476413 CCR7P32248 378 aa2.36□□□□□ -2.03
VPS50-212ENST00000476413 AP2S1P53680 142 aaPredicted RBP2.36□□□□□ -2.03
VPS50-212ENST00000476413 LRRC75BQ2VPJ9 315 aa2.36□□□□□ -2.03
VPS50-212ENST00000476413 HIST2H3AQ71DI3 136 aa2.36□□□□□ -2.03
VPS50-212ENST00000476413 RNASE11Q8TAA1 199 aaKnown RBP2.36□□□□□ -2.03
VPS50-212ENST00000476413 PXMP4Q9Y6I8 212 aa2.36□□□□□ -2.03
VPS50-212ENST00000476413 V9GYY5 206 aaPredicted RBP2.36□□□□□ -2.03
VPS50-212ENST00000476413 GBF1Q92538 1859 aa2.36□□□□□ -2.03
VPS50-212ENST00000476413 COL5A3P25940 1745 aaPredicted RBP2.36□□□□□ -2.03
VPS50-212ENST00000476413 OR4C45A6NMZ5 311 aa2.35□□□□□ -2.03
VPS50-212ENST00000476413 LST1O00453 97 aa2.35□□□□□ -2.03
VPS50-212ENST00000476413 AHSA1O95433 338 aa2.35□□□□□ -2.03
VPS50-212ENST00000476413 TCL1AP56279 114 aa2.35□□□□□ -2.03
VPS50-212ENST00000476413 GNA12Q03113 381 aa2.35□□□□□ -2.03
VPS50-212ENST00000476413 KRTAP13-4Q3LI77 160 aa2.35□□□□□ -2.03
VPS50-212ENST00000476413 TNFAIP8L3Q5GJ75 292 aa2.35□□□□□ -2.03
VPS50-212ENST00000476413 KRTAP5-7Q6L8G8 165 aa2.35□□□□□ -2.03
VPS50-212ENST00000476413 DEFB125Q8N687 156 aa2.35□□□□□ -2.03
VPS50-212ENST00000476413 OR4X1Q8NH49 305 aa2.35□□□□□ -2.03
VPS50-212ENST00000476413 ZNF675Q8TD23 568 aa2.35□□□□□ -2.03
VPS50-212ENST00000476413 ASB17Q8WXJ9 295 aa2.35□□□□□ -2.03
VPS50-212ENST00000476413 OPTNQ96CV9 577 aa2.35□□□□□ -2.03
VPS50-212ENST00000476413 DIRAS2Q96HU8 199 aa2.35□□□□□ -2.03
VPS50-212ENST00000476413 PTPRSQ13332 1948 aa2.34□□□□□ -2.03
VPS50-212ENST00000476413 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.34□□□□□ -2.03
VPS50-212ENST00000476413 TRGV5A0A0B4J1U4 118 aa2.34□□□□□ -2.03
VPS50-212ENST00000476413 H3BRN7 92 aa2.34□□□□□ -2.03
VPS50-212ENST00000476413 BHLHE40O14503 412 aa2.34□□□□□ -2.03
VPS50-212ENST00000476413 CALB1P05937 261 aa2.34□□□□□ -2.03
VPS50-212ENST00000476413 BPGMP07738 259 aa2.34□□□□□ -2.03
VPS50-212ENST00000476413 RAB5BP61020 215 aa2.34□□□□□ -2.03
VPS50-212ENST00000476413 C5orf46Q6UWT4 87 aa2.34□□□□□ -2.03
VPS50-212ENST00000476413 LHFPL1Q86WI0 220 aa2.34□□□□□ -2.03
VPS50-212ENST00000476413 OR13C8Q8NGS7 320 aa2.34□□□□□ -2.03
VPS50-212ENST00000476413 NDUFB11Q9NX14 153 aa2.34□□□□□ -2.03
VPS50-212ENST00000476413 TAAR3PQ9P1P4 343 aa2.34□□□□□ -2.03
VPS50-212ENST00000476413 RBM7Q9Y580 266 aaKnown RBP2.34□□□□□ -2.03
VPS50-212ENST00000476413 COL11A1P12107 1806 aaPredicted RBP2.33□□□□□ -2.04
VPS50-212ENST00000476413 A8MUN3 132 aa2.33□□□□□ -2.04
VPS50-212ENST00000476413 C2orf74A8MZ97 194 aa2.33□□□□□ -2.04
VPS50-212ENST00000476413 PLA2G10O15496 165 aa2.33□□□□□ -2.04
VPS50-212ENST00000476413 DCTN3O75935 186 aa2.33□□□□□ -2.04
VPS50-212ENST00000476413 MARCKSL1P49006 195 aa2.33□□□□□ -2.04
VPS50-212ENST00000476413 MYL6P60660 151 aa2.33□□□□□ -2.04
VPS50-212ENST00000476413 IMPG1Q17R60 797 aa2.33□□□□□ -2.04
VPS50-212ENST00000476413 ALKAL1Q6UXT8 129 aa2.33□□□□□ -2.04
VPS50-212ENST00000476413 SLC22A24Q8N4F4 322 aa2.33□□□□□ -2.04
VPS50-212ENST00000476413 OR8J2Q8NGG1 315 aa2.33□□□□□ -2.04
VPS50-212ENST00000476413 TMA16Q96EY4 203 aaKnown RBP2.33□□□□□ -2.04
VPS50-212ENST00000476413 GPR84Q9NQS5 396 aa2.33□□□□□ -2.04
VPS50-212ENST00000476413 GUCA1BQ9UMX6 200 aa2.33□□□□□ -2.04
VPS50-212ENST00000476413 PRELID1Q9Y255 219 aa2.33□□□□□ -2.04
VPS50-212ENST00000476413 KDM5BQ9UGL1 1544 aa2.32□□□□□ -2.04
VPS50-212ENST00000476413 IGHV1-69-2A0A0G2JMI3 117 aa2.32□□□□□ -2.04
VPS50-212ENST00000476413 TXNDC9O14530 226 aa2.32□□□□□ -2.04
VPS50-212ENST00000476413 CCL5P13501 91 aa2.32□□□□□ -2.04
VPS50-212ENST00000476413 SLCO1A2P46721 670 aa2.32□□□□□ -2.04
VPS50-212ENST00000476413 ZNF90Q03938 601 aa2.32□□□□□ -2.04
VPS50-212ENST00000476413 BATFQ16520 125 aa2.32□□□□□ -2.04
VPS50-212ENST00000476413 MIAQ16674 131 aa2.32□□□□□ -2.04
VPS50-212ENST00000476413 LPCAT4Q643R3 524 aa2.32□□□□□ -2.04
VPS50-212ENST00000476413 Q6ZS52 159 aa2.32□□□□□ -2.04
VPS50-212ENST00000476413 TMEM86BQ8N661 226 aa2.32□□□□□ -2.04
VPS50-212ENST00000476413 OR1M1Q8NGA1 313 aa2.32□□□□□ -2.04
VPS50-212ENST00000476413 OR4X2Q8NGF9 303 aa2.32□□□□□ -2.04
VPS50-212ENST00000476413 FKBP14Q9NWM8 211 aa2.32□□□□□ -2.04
VPS50-212ENST00000476413 GRIN2BQ13224 1484 aa2.32□□□□□ -2.04
VPS50-212ENST00000476413 A0A1B0GW54 56 aa2.31□□□□□ -2.04
VPS50-212ENST00000476413 INMT-MINDY4F8WBC2 141 aa2.31□□□□□ -2.04
VPS50-212ENST00000476413 OVOL1O14753 267 aa2.31□□□□□ -2.04
VPS50-212ENST00000476413 UCHL1P09936 223 aa2.31□□□□□ -2.04
VPS50-212ENST00000476413 HIST1H1EP10412 219 aaKnown RBP2.31□□□□□ -2.04
VPS50-212ENST00000476413 PEBP1P30086 187 aaKnown RBP2.31□□□□□ -2.04
VPS50-212ENST00000476413 CCR2P41597 374 aa2.31□□□□□ -2.04
VPS50-212ENST00000476413 FXYD7P58549 80 aa2.31□□□□□ -2.04
VPS50-212ENST00000476413 TAS2R20P59543 309 aa2.31□□□□□ -2.04
VPS50-212ENST00000476413 ACSM3Q53FZ2 586 aa2.31□□□□□ -2.04
VPS50-212ENST00000476413 MNS1Q8NEH6 495 aa2.31□□□□□ -2.04
VPS50-212ENST00000476413 OR2T4Q8NH00 348 aa2.31□□□□□ -2.04
VPS50-212ENST00000476413 LHFPL5Q8TAF8 219 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms