RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 UBE2V1Q13404 147 aa7.05□□□□□ -1.28
VAPB-205ENST00000476395 KIAA1644Q3SXP7 199 aa7.05□□□□□ -1.28
VAPB-205ENST00000476395 CENPVQ7Z7K6 275 aaPredicted RBP7.05□□□□□ -1.28
VAPB-205ENST00000476395 SGMS2Q8NHU3 365 aa7.05□□□□□ -1.28
VAPB-205ENST00000476395 RAB1CQ92928 201 aa7.05□□□□□ -1.28
VAPB-205ENST00000476395 SPTBN2O15020 2390 aa7.05□□□□□ -1.28
VAPB-205ENST00000476395 NTN3O00634 580 aaPredicted RBP7.05□□□□□ -1.28
VAPB-205ENST00000476395 SAP30O75446 220 aa7.05□□□□□ -1.28
VAPB-205ENST00000476395 CNIH1O95406 144 aa7.05□□□□□ -1.28
VAPB-205ENST00000476395 LHX2P50458 406 aa7.05□□□□□ -1.28
VAPB-205ENST00000476395 FUT6P51993 359 aa7.05□□□□□ -1.28
VAPB-205ENST00000476395 KLF3P57682 345 aaPredicted RBP7.05□□□□□ -1.28
VAPB-205ENST00000476395 ARF6P62330 175 aa7.05□□□□□ -1.28
VAPB-205ENST00000476395 SRSF7Q16629 238 aaKnown RBP eCLIP7.05□□□□□ -1.28
VAPB-205ENST00000476395 CEACAM16Q2WEN9 425 aa7.05□□□□□ -1.28
VAPB-205ENST00000476395 HLA-BQ31612 363 aa7.05□□□□□ -1.28
VAPB-205ENST00000476395 SNIP1Q8TAD8 396 aaKnown RBP7.05□□□□□ -1.28
VAPB-205ENST00000476395 UBALD1Q8TB05 177 aa7.05□□□□□ -1.28
VAPB-205ENST00000476395 BORCS8Q96FH0 119 aa7.05□□□□□ -1.28
VAPB-205ENST00000476395 WDYHV1Q96HA8 205 aa7.05□□□□□ -1.28
VAPB-205ENST00000476395 TECTBQ96PL2 329 aa7.05□□□□□ -1.28
VAPB-205ENST00000476395 OR4C12Q96R67 309 aa7.05□□□□□ -1.28
VAPB-205ENST00000476395 SAMD10Q9BYL1 202 aa7.05□□□□□ -1.28
VAPB-205ENST00000476395 ZDHHC11Q9H8X9 412 aa7.05□□□□□ -1.28
VAPB-205ENST00000476395 YAE1D1Q9NRH1 226 aa7.05□□□□□ -1.28
VAPB-205ENST00000476395 RIF1Q5UIP0 2472 aaKnown RBP7.05□□□□□ -1.28
VAPB-205ENST00000476395 SLC17A3O00476 420 aa7.04□□□□□ -1.28
VAPB-205ENST00000476395 PLCXD3Q63HM9 321 aa7.04□□□□□ -1.28
VAPB-205ENST00000476395 WFDC8Q8IUA0 241 aa7.04□□□□□ -1.28
VAPB-205ENST00000476395 ZNF525Q8N782 197 aa7.04□□□□□ -1.28
VAPB-205ENST00000476395 MBD3L1Q8WWY6 194 aa7.04□□□□□ -1.28
VAPB-205ENST00000476395 RCHY1Q96PM5 261 aa7.04□□□□□ -1.28
VAPB-205ENST00000476395 FOXB1Q99853 325 aa7.04□□□□□ -1.28
VAPB-205ENST00000476395 SLC39A9Q9NUM3 307 aa7.04□□□□□ -1.28
VAPB-205ENST00000476395 MED12LQ86YW9 2145 aa7.04□□□□□ -1.28
VAPB-205ENST00000476395 TRBV20OR9-2A0A075B6H5 130 aa7.04□□□□□ -1.28
VAPB-205ENST00000476395 ODAMA1E959 279 aa7.04□□□□□ -1.28
VAPB-205ENST00000476395 CTRLP40313 264 aa7.04□□□□□ -1.28
VAPB-205ENST00000476395 ATP5G3P48201 142 aa7.04□□□□□ -1.28
VAPB-205ENST00000476395 SLC35B1P78383 322 aa7.04□□□□□ -1.28
VAPB-205ENST00000476395 TGFBR3Q03167 851 aa7.04□□□□□ -1.28
VAPB-205ENST00000476395 GCSAMLQ5JQS6 135 aa7.04□□□□□ -1.28
VAPB-205ENST00000476395 ZNF324BQ6AW86 544 aaPredicted RBP7.04□□□□□ -1.28
VAPB-205ENST00000476395 FAM19A2Q8N3H0 131 aa7.04□□□□□ -1.28
VAPB-205ENST00000476395 OR4C5Q8NGB2 326 aa7.04□□□□□ -1.28
VAPB-205ENST00000476395 SCGB1C1Q8TD33 95 aa7.04□□□□□ -1.28
VAPB-205ENST00000476395 ST6GALNAC6Q969X2 333 aa7.04□□□□□ -1.28
VAPB-205ENST00000476395 GPR146Q96CH1 333 aa7.04□□□□□ -1.28
VAPB-205ENST00000476395 PTRH2Q9Y3E5 179 aaKnown RBP7.04□□□□□ -1.28
VAPB-205ENST00000476395 DIRC3C9JPN6 131 aa7.04□□□□□ -1.28
VAPB-205ENST00000476395 CXCL13O43927 109 aa7.04□□□□□ -1.28
VAPB-205ENST00000476395 TYMSP04818 313 aa7.04□□□□□ -1.28
VAPB-205ENST00000476395 PMCHP20382 165 aa7.04□□□□□ -1.28
VAPB-205ENST00000476395 HNRNPA3P51991 378 aaKnown RBP7.04□□□□□ -1.28
VAPB-205ENST00000476395 RIPPLY3P57055 190 aa7.04□□□□□ -1.28
VAPB-205ENST00000476395 PPP1CBP62140 327 aa7.04□□□□□ -1.28
VAPB-205ENST00000476395 SPANXN5Q5MJ07 72 aa7.04□□□□□ -1.28
VAPB-205ENST00000476395 OR10D3Q8NH80 312 aa7.04□□□□□ -1.28
VAPB-205ENST00000476395 TMEM45BQ96B21 275 aa7.04□□□□□ -1.28
VAPB-205ENST00000476395 PRDM14Q9GZV8 571 aa7.04□□□□□ -1.28
VAPB-205ENST00000476395 OBP2BQ9NPH6 170 aa7.04□□□□□ -1.28
VAPB-205ENST00000476395 K7EP13 123 aa7.03□□□□□ -1.28
VAPB-205ENST00000476395 SIRPB1O00241 398 aa7.03□□□□□ -1.28
VAPB-205ENST00000476395 LAMTOR5O43504 91 aa7.03□□□□□ -1.28
VAPB-205ENST00000476395 IGLC2P0DOY2 106 aa7.03□□□□□ -1.28
VAPB-205ENST00000476395 IGLC3P0DOY3 106 aa7.03□□□□□ -1.28
VAPB-205ENST00000476395 PSG1P11464 419 aa7.03□□□□□ -1.28
VAPB-205ENST00000476395 SSR4P51571 173 aa7.03□□□□□ -1.28
VAPB-205ENST00000476395 FBLN7Q53RD9 439 aa7.03□□□□□ -1.28
VAPB-205ENST00000476395 LINC01551Q86U37 167 aa7.03□□□□□ -1.28
VAPB-205ENST00000476395 OR5AU1Q8NGC0 362 aa7.03□□□□□ -1.28
VAPB-205ENST00000476395 PIGCQ92535 297 aa7.03□□□□□ -1.28
VAPB-205ENST00000476395 P2RX4Q99571 388 aa7.03□□□□□ -1.28
VAPB-205ENST00000476395 ZNF442Q9H7R0 627 aa7.03□□□□□ -1.28
VAPB-205ENST00000476395 ELOVL5Q9NYP7 299 aa7.03□□□□□ -1.28
VAPB-205ENST00000476395 C19orf25Q9UFG5 118 aaPredicted RBP7.03□□□□□ -1.28
VAPB-205ENST00000476395 COX11Q9Y6N1 276 aa7.03□□□□□ -1.28
VAPB-205ENST00000476395 TRAV24A0A0B4J272 114 aa7.03□□□□□ -1.28
VAPB-205ENST00000476395 DNPH1O43598 174 aa7.03□□□□□ -1.28
VAPB-205ENST00000476395 SYNGR1O43759 233 aa7.03□□□□□ -1.28
VAPB-205ENST00000476395 PGLYRP1O75594 196 aaPredicted RBP7.03□□□□□ -1.28
VAPB-205ENST00000476395 OR7C1O76099 320 aaPredicted RBP7.03□□□□□ -1.28
VAPB-205ENST00000476395 IGHV3-9P01782 118 aa7.03□□□□□ -1.28
VAPB-205ENST00000476395 SERPINA7P05543 415 aa7.03□□□□□ -1.28
VAPB-205ENST00000476395 MSMO1Q15800 293 aa7.03□□□□□ -1.28
VAPB-205ENST00000476395 LYSMD4Q5XG99 296 aa7.03□□□□□ -1.28
VAPB-205ENST00000476395 TMEM144Q7Z5S9 345 aa7.03□□□□□ -1.28
VAPB-205ENST00000476395 PPP1R32Q7Z5V6 425 aa7.03□□□□□ -1.28
VAPB-205ENST00000476395 BAGE3Q86Y29 109 aa7.03□□□□□ -1.28
VAPB-205ENST00000476395 BAGE2Q86Y30 109 aa7.03□□□□□ -1.28
VAPB-205ENST00000476395 STARD4Q96DR4 205 aa7.03□□□□□ -1.28
VAPB-205ENST00000476395 ZNF488Q96MN9 340 aa7.03□□□□□ -1.28
VAPB-205ENST00000476395 GEMIN7Q9H840 131 aaKnown RBP7.03□□□□□ -1.28
VAPB-205ENST00000476395 WIPI2Q9Y4P8 454 aa7.03□□□□□ -1.28
VAPB-205ENST00000476395 YLPM1P49750 1951 aaKnown RBP7.03□□□□□ -1.28
VAPB-205ENST00000476395 TRAV39A0A0B4J263 110 aa7.03□□□□□ -1.28
VAPB-205ENST00000476395 NDUFB4O95168 129 aa7.03□□□□□ -1.28
VAPB-205ENST00000476395 NGFP01138 241 aa7.03□□□□□ -1.28
VAPB-205ENST00000476395 CELA3AP09093 270 aa7.03□□□□□ -1.28
VAPB-205ENST00000476395 PSG2P11465 335 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms