RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 PMS2P5A8MQ11 134 aa13.75□□□□□ -0.21
TVP23B-202ENST00000476139 LINC00587B1AMM8 73 aa13.75□□□□□ -0.21
TVP23B-202ENST00000476139 CGB3P0DN86 165 aa13.75□□□□□ -0.21
TVP23B-202ENST00000476139 CGB7P0DN87 165 aa13.75□□□□□ -0.21
TVP23B-202ENST00000476139 FAM216BQ8N7L0 139 aa13.75□□□□□ -0.21
TVP23B-202ENST00000476139 GATAD1Q8WUU5 269 aa13.75□□□□□ -0.21
TVP23B-202ENST00000476139 SLC25A22Q9H936 323 aa13.75□□□□□ -0.21
TVP23B-202ENST00000476139 MAP1LC3B2A6NCE7 125 aa13.75□□□□□ -0.21
TVP23B-202ENST00000476139 TRGC2P03986 189 aa13.75□□□□□ -0.21
TVP23B-202ENST00000476139 RPP25LQ8N5L8 163 aaKnown RBP13.75□□□□□ -0.21
TVP23B-202ENST00000476139 LHX4Q969G2 390 aa13.75□□□□□ -0.21
TVP23B-202ENST00000476139 MAP1LC3BQ9GZQ8 125 aa13.75□□□□□ -0.21
TVP23B-202ENST00000476139 F2RL2O00254 374 aa13.74□□□□□ -0.21
TVP23B-202ENST00000476139 CLEC12BQ2HXU8 276 aa13.74□□□□□ -0.21
TVP23B-202ENST00000476139 CT45A1Q5HYN5 189 aa13.74□□□□□ -0.21
TVP23B-202ENST00000476139 MRGPRGQ86SM5 289 aa13.74□□□□□ -0.21
TVP23B-202ENST00000476139 CT45A3Q8NHU0 189 aa13.74□□□□□ -0.21
TVP23B-202ENST00000476139 SLC39A9Q9NUM3 307 aa13.74□□□□□ -0.21
TVP23B-202ENST00000476139 TRAV3A0A0B4J244 114 aa13.74□□□□□ -0.21
TVP23B-202ENST00000476139 ACSM6Q6P461 480 aa13.74□□□□□ -0.21
TVP23B-202ENST00000476139 TMEM108Q6UXF1 575 aa13.74□□□□□ -0.21
TVP23B-202ENST00000476139 DPPA3Q6W0C5 159 aa13.74□□□□□ -0.21
TVP23B-202ENST00000476139 CA5BP1Q8WTZ4 195 aa13.74□□□□□ -0.21
TVP23B-202ENST00000476139 FAM222BQ8WU58 562 aa13.74□□□□□ -0.21
TVP23B-202ENST00000476139 MMP23AO75900 390 aa13.74□□□□□ -0.21
TVP23B-202ENST00000476139 THBDP07204 575 aa13.74□□□□□ -0.21
TVP23B-202ENST00000476139 BSPH1Q075Z2 132 aa13.74□□□□□ -0.21
TVP23B-202ENST00000476139 GFI1BQ5VTD9 330 aa13.74□□□□□ -0.21
TVP23B-202ENST00000476139 STUMQ69YW2 141 aa13.74□□□□□ -0.21
TVP23B-202ENST00000476139 SPNS3Q6ZMD2 512 aa13.74□□□□□ -0.21
TVP23B-202ENST00000476139 TCF23Q7RTU1 214 aa13.74□□□□□ -0.21
TVP23B-202ENST00000476139 MALSU1Q96EH3 234 aa13.74□□□□□ -0.21
TVP23B-202ENST00000476139 PSMG3Q9BT73 122 aaPredicted RBP13.74□□□□□ -0.21
TVP23B-202ENST00000476139 OR6C3Q9NZP0 311 aa13.74□□□□□ -0.21
TVP23B-202ENST00000476139 DOK5Q9P104 306 aa13.74□□□□□ -0.21
TVP23B-202ENST00000476139 S100A8P05109 93 aa13.73□□□□□ -0.21
TVP23B-202ENST00000476139 TFF3Q07654 80 aa13.73□□□□□ -0.21
TVP23B-202ENST00000476139 TBR1Q16650 682 aa13.73□□□□□ -0.21
TVP23B-202ENST00000476139 TCTEX1D1Q8N7M0 179 aa13.73□□□□□ -0.21
TVP23B-202ENST00000476139 HIPK2Q9H2X6 1198 aa13.73□□□□□ -0.21
TVP23B-202ENST00000476139 GSN-AS1Q9NRJ2 163 aa13.73□□□□□ -0.21
TVP23B-202ENST00000476139 LAMP3Q9UQV4 416 aa13.73□□□□□ -0.21
TVP23B-202ENST00000476139 KBTBD11-OT1A0A1B0GTJ5 212 aa13.73□□□□□ -0.21
TVP23B-202ENST00000476139 FABP1P07148 127 aa13.73□□□□□ -0.21
TVP23B-202ENST00000476139 OR4A8P0C604 315 aa13.73□□□□□ -0.21
TVP23B-202ENST00000476139 SERF2P84101 59 aa13.73□□□□□ -0.21
TVP23B-202ENST00000476139 OR10P1Q8NGE3 313 aa13.73□□□□□ -0.21
TVP23B-202ENST00000476139 GAFA1Q96PS6 74 aa13.73□□□□□ -0.21
TVP23B-202ENST00000476139 SEBOXQ9HB31 216 aaPredicted RBP13.73□□□□□ -0.21
TVP23B-202ENST00000476139 SSUH2Q9Y2M2 353 aa13.73□□□□□ -0.21
TVP23B-202ENST00000476139 HPRT1P00492 218 aa13.72□□□□□ -0.21
TVP23B-202ENST00000476139 ADIPOQQ15848 244 aa13.72□□□□□ -0.21
TVP23B-202ENST00000476139 TMEM41BQ5BJD5 291 aa13.72□□□□□ -0.21
TVP23B-202ENST00000476139 NECAP1Q8NC96 275 aa13.72□□□□□ -0.21
TVP23B-202ENST00000476139 RPUSD4Q96CM3 377 aaKnown RBP13.72□□□□□ -0.21
TVP23B-202ENST00000476139 SDSLQ96GA7 329 aa13.72□□□□□ -0.21
TVP23B-202ENST00000476139 CISD1Q9NZ45 108 aaKnown RBP13.72□□□□□ -0.21
TVP23B-202ENST00000476139 ZNRD1Q9P1U0 126 aa13.72□□□□□ -0.21
TVP23B-202ENST00000476139 MIOXQ9UGB7 285 aa13.72□□□□□ -0.21
TVP23B-202ENST00000476139 PTPRQQ9UMZ3 2332 aa13.72□□□□□ -0.21
TVP23B-202ENST00000476139 TRAV1-1A0A0B4J248 108 aa13.72□□□□□ -0.21
TVP23B-202ENST00000476139 FAM87AP0C7U9 286 aa13.72□□□□□ -0.21
TVP23B-202ENST00000476139 SMIM6P0DI80 62 aa13.72□□□□□ -0.21
TVP23B-202ENST00000476139 SLC35E3Q7Z769 313 aa13.72□□□□□ -0.21
TVP23B-202ENST00000476139 MBD3L1Q8WWY6 194 aa13.72□□□□□ -0.21
TVP23B-202ENST00000476139 DYSFO75923 2080 aa13.72□□□□□ -0.21
TVP23B-202ENST00000476139 HCFC1P51610 2035 aa13.72□□□□□ -0.21
TVP23B-202ENST00000476139 TMPRSS2O15393 492 aa13.71□□□□□ -0.21
TVP23B-202ENST00000476139 B2MP61769 119 aa13.71□□□□□ -0.21
TVP23B-202ENST00000476139 NUP37Q8NFH4 326 aa13.71□□□□□ -0.21
TVP23B-202ENST00000476139 LRBAP50851 2863 aa13.71□□□□□ -0.21
TVP23B-202ENST00000476139 SAA2-SAA4A0A096LPE2 208 aa13.71□□□□□ -0.21
TVP23B-202ENST00000476139 IFITM10A6NMD0 228 aa13.71□□□□□ -0.21
TVP23B-202ENST00000476139 SAA2P0DJI9 122 aaPredicted RBP13.71□□□□□ -0.21
TVP23B-202ENST00000476139 FGF7P21781 194 aa13.71□□□□□ -0.21
TVP23B-202ENST00000476139 GNG10P50151 68 aa13.71□□□□□ -0.21
TVP23B-202ENST00000476139 PRAMEF5Q5TYX0 476 aa13.71□□□□□ -0.21
TVP23B-202ENST00000476139 S1PR3Q99500 378 aa13.71□□□□□ -0.21
TVP23B-202ENST00000476139 GFOD1Q9NXC2 390 aa13.71□□□□□ -0.21
TVP23B-202ENST00000476139 YLPM1P49750 1951 aaKnown RBP13.71□□□□□ -0.22
TVP23B-202ENST00000476139 TNFSF4P23510 183 aa13.71□□□□□ -0.22
TVP23B-202ENST00000476139 MAS1LP35410 378 aa13.71□□□□□ -0.22
TVP23B-202ENST00000476139 ADIRFQ15847 76 aa13.71□□□□□ -0.22
TVP23B-202ENST00000476139 CDPF1Q6NVV7 123 aa13.71□□□□□ -0.22
TVP23B-202ENST00000476139 OR5T1Q8NG75 326 aa13.71□□□□□ -0.22
TVP23B-202ENST00000476139 TRGV10A0A0A0MS01 117 aa13.7□□□□□ -0.22
TVP23B-202ENST00000476139 TRBV23-1A0A0A0MS06 115 aa13.7□□□□□ -0.22
TVP23B-202ENST00000476139 HIST1H2BKO60814 126 aa13.7□□□□□ -0.22
TVP23B-202ENST00000476139 HIST1H2BJP06899 126 aa13.7□□□□□ -0.22
TVP23B-202ENST00000476139 HIST1H2BOP23527 126 aa13.7□□□□□ -0.22
TVP23B-202ENST00000476139 HIST1H2BBP33778 126 aa13.7□□□□□ -0.22
TVP23B-202ENST00000476139 HIST1H2BDP58876 126 aa13.7□□□□□ -0.22
TVP23B-202ENST00000476139 HIST1H2BCP62807 126 aa13.7□□□□□ -0.22
TVP23B-202ENST00000476139 HIST2H2BEQ16778 126 aa13.7□□□□□ -0.22
TVP23B-202ENST00000476139 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.7□□□□□ -0.22
TVP23B-202ENST00000476139 ZNF788Q6ZQV5 615 aa13.7□□□□□ -0.22
TVP23B-202ENST00000476139 HIST1H2BHQ93079 126 aa13.7□□□□□ -0.22
TVP23B-202ENST00000476139 HIST1H2BNQ99877 126 aa13.7□□□□□ -0.22
TVP23B-202ENST00000476139 HIST1H2BMQ99879 126 aa13.7□□□□□ -0.22
TVP23B-202ENST00000476139 SPTA1P02549 2419 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 116.3 ms